RNA–Protein interactions for RNA: ENST00000586280.1

FARSA-204, Transcript of phenylalanyl-tRNA synthetase subunit alpha, humanhuman

TSL 3

Gene FARSA, Length 803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARSA-204ENST00000586280 NISCHQ9Y2I1 1504 aa31.17■■■□□ 2.58
FARSA-204ENST00000586280 ABCC9O60706 1549 aa28.1■■■□□ 2.09
FARSA-204ENST00000586280 CCDC180Q9P1Z9 1646 aa27.76■■■□□ 2.03
FARSA-204ENST00000586280 DNAJC5BQ9UF47 199 aa26.9■■□□□ 1.9
FARSA-204ENST00000586280 RB1CC1Q8TDY2 1594 aa26.45■■□□□ 1.82
FARSA-204ENST00000586280 NACADO15069 1562 aa26.17■■□□□ 1.78
FARSA-204ENST00000586280 PABPN1Q86U42 306 aaKnown RBP eCLIP26.17■■□□□ 1.78
FARSA-204ENST00000586280 DCAF8L2P0C7V8 631 aa26.1■■□□□ 1.77
FARSA-204ENST00000586280 UNC13AQ9UPW8 1703 aa25.97■■□□□ 1.75
FARSA-204ENST00000586280 ZCCHC6Q5VYS8 1495 aaKnown RBP25.95■■□□□ 1.74
FARSA-204ENST00000586280 MYO15BQ96JP2 1530 aa25.86■■□□□ 1.73
FARSA-204ENST00000586280 BICRAQ9NZM4 1560 aa25.83■■□□□ 1.73
FARSA-204ENST00000586280 DCAF1Q9Y4B6 1507 aa25.74■■□□□ 1.71
FARSA-204ENST00000586280 SCRIBQ14160 1630 aa25.37■■□□□ 1.65
FARSA-204ENST00000586280 CC2D2AQ9P2K1 1620 aa25.34■■□□□ 1.65
FARSA-204ENST00000586280 CECR2Q9BXF3 1484 aa25.32■■□□□ 1.64
FARSA-204ENST00000586280 SHROOM4Q9ULL8 1493 aa25.22■■□□□ 1.63
FARSA-204ENST00000586280 EIF4G1Q04637 1599 aaKnown RBP25.16■■□□□ 1.62
FARSA-204ENST00000586280 DNAJC5Q9H3Z4 198 aa25.02■■□□□ 1.6
FARSA-204ENST00000586280 CUX2O14529 1486 aa24.27■■□□□ 1.48
FARSA-204ENST00000586280 NCAPD3P42695 1498 aa24.23■■□□□ 1.47
FARSA-204ENST00000586280 SMARCA4P51532 1647 aa24.23■■□□□ 1.47
FARSA-204ENST00000586280 ERCC6Q03468 1493 aa24.19■■□□□ 1.46
FARSA-204ENST00000586280 BAZ1AQ9NRL2 1556 aaPredicted RBP24.14■■□□□ 1.45
FARSA-204ENST00000586280 ATAD2BQ9ULI0 1458 aa24.13■■□□□ 1.45
FARSA-204ENST00000586280 NESP48681 1621 aa24.07■■□□□ 1.44
FARSA-204ENST00000586280 MROH2BQ7Z745 1585 aa24.06■■□□□ 1.44
FARSA-204ENST00000586280 SMARCA2P51531 1590 aa24.03■■□□□ 1.44
FARSA-204ENST00000586280 PEG3Q9GZU2 1588 aa23.95■■□□□ 1.43
FARSA-204ENST00000586280 HMGXB3Q12766 1538 aa23.95■■□□□ 1.43
FARSA-204ENST00000586280 BAZ1BQ9UIG0 1483 aaKnown RBP23.87■■□□□ 1.41
FARSA-204ENST00000586280 WIZO95785 1651 aa23.82■■□□□ 1.4
FARSA-204ENST00000586280 THOC2Q8NI27 1593 aaKnown RBP23.82■■□□□ 1.4
FARSA-204ENST00000586280 RSF1Q96T23 1441 aaPredicted RBP23.72■■□□□ 1.39
FARSA-204ENST00000586280 LAMC3Q9Y6N6 1575 aa23.69■■□□□ 1.38
FARSA-204ENST00000586280 KIF21AQ7Z4S6 1674 aa23.67■■□□□ 1.38
FARSA-204ENST00000586280 TRIM41Q8WV44 630 aa23.6■■□□□ 1.37
FARSA-204ENST00000586280 PDS5BQ9NTI5 1447 aa23.58■■□□□ 1.36
FARSA-204ENST00000586280 TOP2AP11388 1531 aaKnown RBP23.51■■□□□ 1.35
FARSA-204ENST00000586280 CADPSQ9ULU8 1353 aa23.49■■□□□ 1.35
FARSA-204ENST00000586280 MRC2Q9UBG0 1479 aa23.42■■□□□ 1.34
FARSA-204ENST00000586280 WDR62O43379 1518 aa23.38■■□□□ 1.33
FARSA-204ENST00000586280 CCDC88BA6NC98 1476 aa23.23■■□□□ 1.31
FARSA-204ENST00000586280 CEP164Q9UPV0 1460 aa23.22■■□□□ 1.31
FARSA-204ENST00000586280 CFTRP13569 1480 aa23.2■■□□□ 1.3
FARSA-204ENST00000586280 FANCD2Q9BXW9 1451 aa23.2■■□□□ 1.3
FARSA-204ENST00000586280 OSCARQ8IYS5 282 aa23.18■■□□□ 1.3
FARSA-204ENST00000586280 PRDM2Q13029 1718 aa23.11■■□□□ 1.29
FARSA-204ENST00000586280 URB2Q14146 1524 aaKnown RBP23.09■■□□□ 1.29
FARSA-204ENST00000586280 SUPT5HO00267 1087 aaKnown RBP23.05■■□□□ 1.28
FARSA-204ENST00000586280 RIMBP3CA6NJZ7 1639 aa22.92■■□□□ 1.26
FARSA-204ENST00000586280 RIMBP3BA6NNM3 1639 aa22.92■■□□□ 1.26
FARSA-204ENST00000586280 RIMBP3Q9UFD9 1639 aa22.92■■□□□ 1.26
FARSA-204ENST00000586280 ZNF608Q9ULD9 1512 aaPredicted RBP22.9■■□□□ 1.26
FARSA-204ENST00000586280 ARHGEF11O15085 1522 aa22.79■■□□□ 1.24
FARSA-204ENST00000586280 IFT140Q96RY7 1462 aa22.79■■□□□ 1.24
FARSA-204ENST00000586280 TOPBP1Q92547 1522 aa22.75■■□□□ 1.23
FARSA-204ENST00000586280 CYB5RLQ6IPT4 315 aa22.72■■□□□ 1.23
FARSA-204ENST00000586280 DNMBPQ6XZF7 1577 aa22.72■■□□□ 1.23
FARSA-204ENST00000586280 ABCC8Q09428 1581 aa22.66■■□□□ 1.22
FARSA-204ENST00000586280 EIF4G3O43432 1585 aaKnown RBP22.65■■□□□ 1.22
FARSA-204ENST00000586280 AQRO60306 1485 aaKnown RBP eCLIP22.64■■□□□ 1.213e-7■■■□□ 17.9
FARSA-204ENST00000586280 CHD1O14646 1710 aa22.6■■□□□ 1.21
FARSA-204ENST00000586280 ARAP1Q96P48 1450 aa22.58■■□□□ 1.2
FARSA-204ENST00000586280 CUX1P39880 1505 aa22.57■■□□□ 1.2
FARSA-204ENST00000586280 TARBP1Q13395 1621 aaKnown RBP22.57■■□□□ 1.2
FARSA-204ENST00000586280 POLA1P09884 1462 aaPredicted RBP22.55■■□□□ 1.2
FARSA-204ENST00000586280 TRHP20396 242 aaPredicted RBP22.54■■□□□ 1.2
FARSA-204ENST00000586280 FBLN2P98095 1184 aa22.53■■□□□ 1.2
FARSA-204ENST00000586280 FGD5Q6ZNL6 1462 aa22.49■■□□□ 1.19
FARSA-204ENST00000586280 RAD54L2Q9Y4B4 1467 aa22.47■■□□□ 1.19
FARSA-204ENST00000586280 TDRD9Q8NDG6 1382 aaKnown RBP22.43■■□□□ 1.18
FARSA-204ENST00000586280 SOGA1O94964 1423 aa22.41■■□□□ 1.18
FARSA-204ENST00000586280 SYNJ1O43426 1573 aa22.37■■□□□ 1.17
FARSA-204ENST00000586280 WDR97A6NE52 1622 aa22.36■■□□□ 1.17
FARSA-204ENST00000586280 BIVM-ERCC5R4GMW8 1640 aa22.35■■□□□ 1.17
FARSA-204ENST00000586280 WRNQ14191 1432 aaPredicted RBP eCLIP22.35■■□□□ 1.17
FARSA-204ENST00000586280 TOP2BQ02880 1626 aa22.34■■□□□ 1.17
FARSA-204ENST00000586280 SNAPC4Q5SXM2 1469 aa22.33■■□□□ 1.16
FARSA-204ENST00000586280 CLASP1Q7Z460 1538 aa22.32■■□□□ 1.16
FARSA-204ENST00000586280 CHMP7Q8WUX9 453 aaPredicted RBP22.27■■□□□ 1.16
FARSA-204ENST00000586280 ABCA10Q8WWZ4 1543 aa22.23■■□□□ 1.15
FARSA-204ENST00000586280 PBRM1Q86U86 1689 aa22.21■■□□□ 1.15
FARSA-204ENST00000586280 ABCA5Q8WWZ7 1642 aa22.2■■□□□ 1.15
FARSA-204ENST00000586280 MAGI1Q96QZ7 1491 aaPredicted RBP22.19■■□□□ 1.14
FARSA-204ENST00000586280 GRIN2BQ13224 1484 aa22.18■■□□□ 1.14
FARSA-204ENST00000586280 AEBP2Q6ZN18 517 aaPredicted RBP22.18■■□□□ 1.14
FARSA-204ENST00000586280 GAPVD1Q14C86 1478 aa22.17■■□□□ 1.14
FARSA-204ENST00000586280 SYNJ2O15056 1496 aa22.15■■□□□ 1.14
FARSA-204ENST00000586280 ERCC6L2Q5T890 1561 aa22.04■■□□□ 1.12
FARSA-204ENST00000586280 ADAMTS12P58397 1594 aa22■■□□□ 1.11
FARSA-204ENST00000586280 CHIC1Q5VXU3 224 aa21.97■■□□□ 1.11
FARSA-204ENST00000586280 ERICH3Q5RHP9 1530 aa21.96■■□□□ 1.11
FARSA-204ENST00000586280 GRIN2AQ12879 1464 aa21.9■■□□□ 1.1
FARSA-204ENST00000586280 FHAD1B1AJZ9 1412 aa21.89■■□□□ 1.1
FARSA-204ENST00000586280 CEP170Q5SW79 1584 aa21.89■■□□□ 1.09
FARSA-204ENST00000586280 NUP160Q12769 1436 aa21.87■■□□□ 1.09
FARSA-204ENST00000586280 KIF27Q86VH2 1401 aa21.86■■□□□ 1.09
FARSA-204ENST00000586280 SHROOM2Q13796 1616 aa21.8■■□□□ 1.08
FARSA-204ENST00000586280 IGF1RP08069 1367 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms