RNA–Protein interactions for RNA: ENST00000585800.1

ZNF397-204, Transcript of zinc finger protein 397, humanhuman

TSL 5 BASIC

Gene ZNF397, Length 2,046 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF397-204ENST00000585800 NISCHQ9Y2I1 1504 aa41.81■■■■■ 4.28
ZNF397-204ENST00000585800 CCDC180Q9P1Z9 1646 aa36.76■■■■□ 3.48
ZNF397-204ENST00000585800 ABCC9O60706 1549 aa35.68■■■■□ 3.3
ZNF397-204ENST00000585800 DCAF8L2P0C7V8 631 aa34.93■■■■□ 3.18
ZNF397-204ENST00000585800 ZCCHC6Q5VYS8 1495 aaKnown RBP34.9■■■■□ 3.18
ZNF397-204ENST00000585800 DCAF1Q9Y4B6 1507 aa34.51■■■■□ 3.11
ZNF397-204ENST00000585800 NACADO15069 1562 aa34.49■■■■□ 3.11
ZNF397-204ENST00000585800 MYO15BQ96JP2 1530 aa34.43■■■■□ 3.1
ZNF397-204ENST00000585800 RB1CC1Q8TDY2 1594 aa34.39■■■■□ 3.1
ZNF397-204ENST00000585800 SCRIBQ14160 1630 aa33.76■■■□□ 2.99
ZNF397-204ENST00000585800 UNC13AQ9UPW8 1703 aa33.73■■■□□ 2.99
ZNF397-204ENST00000585800 SHROOM4Q9ULL8 1493 aa33.55■■■□□ 2.96
ZNF397-204ENST00000585800 PABPN1Q86U42 306 aaKnown RBP eCLIP33.55■■■□□ 2.96
ZNF397-204ENST00000585800 BICRAQ9NZM4 1560 aa33.46■■■□□ 2.95
ZNF397-204ENST00000585800 CECR2Q9BXF3 1484 aa32.63■■■□□ 2.81
ZNF397-204ENST00000585800 EIF4G1Q04637 1599 aaKnown RBP32.49■■■□□ 2.79
ZNF397-204ENST00000585800 DNAJC5BQ9UF47 199 aa32.44■■■□□ 2.78
ZNF397-204ENST00000585800 MROH2BQ7Z745 1585 aa32.3■■■□□ 2.76
ZNF397-204ENST00000585800 BAZ1AQ9NRL2 1556 aaPredicted RBP32.3■■■□□ 2.76
ZNF397-204ENST00000585800 SMARCA4P51532 1647 aa32.29■■■□□ 2.76
ZNF397-204ENST00000585800 CC2D2AQ9P2K1 1620 aa32.24■■■□□ 2.75
ZNF397-204ENST00000585800 RSF1Q96T23 1441 aaPredicted RBP32.13■■■□□ 2.73
ZNF397-204ENST00000585800 ATAD2BQ9ULI0 1458 aa32.02■■■□□ 2.72
ZNF397-204ENST00000585800 WIZO95785 1651 aa31.97■■■□□ 2.71
ZNF397-204ENST00000585800 PEG3Q9GZU2 1588 aa31.93■■■□□ 2.7
ZNF397-204ENST00000585800 SMARCA2P51531 1590 aa31.91■■■□□ 2.7
ZNF397-204ENST00000585800 NCAPD3P42695 1498 aa31.9■■■□□ 2.7
ZNF397-204ENST00000585800 SUPT5HO00267 1087 aaKnown RBP31.87■■■□□ 2.69
ZNF397-204ENST00000585800 BAZ1BQ9UIG0 1483 aaKnown RBP31.75■■■□□ 2.67
ZNF397-204ENST00000585800 HMGXB3Q12766 1538 aa31.7■■■□□ 2.67
ZNF397-204ENST00000585800 TOP2AP11388 1531 aaKnown RBP31.54■■■□□ 2.64
ZNF397-204ENST00000585800 CCDC88BA6NC98 1476 aa31.29■■■□□ 2.6
ZNF397-204ENST00000585800 NESP48681 1621 aa31.08■■■□□ 2.57
ZNF397-204ENST00000585800 CADPSQ9ULU8 1353 aa31.03■■■□□ 2.56
ZNF397-204ENST00000585800 CFTRP13569 1480 aa30.94■■■□□ 2.54
ZNF397-204ENST00000585800 LAMC3Q9Y6N6 1575 aa30.9■■■□□ 2.54
ZNF397-204ENST00000585800 PDS5BQ9NTI5 1447 aa30.71■■■□□ 2.51
ZNF397-204ENST00000585800 FANCD2Q9BXW9 1451 aa30.66■■■□□ 2.5
ZNF397-204ENST00000585800 KIF21AQ7Z4S6 1674 aa30.63■■■□□ 2.49
ZNF397-204ENST00000585800 ERCC6Q03468 1493 aa30.63■■■□□ 2.49
ZNF397-204ENST00000585800 PRDM2Q13029 1718 aa30.62■■■□□ 2.49
ZNF397-204ENST00000585800 CEP164Q9UPV0 1460 aa30.52■■■□□ 2.48
ZNF397-204ENST00000585800 MRC2Q9UBG0 1479 aa30.35■■■□□ 2.45
ZNF397-204ENST00000585800 URB2Q14146 1524 aaKnown RBP30.35■■■□□ 2.45
ZNF397-204ENST00000585800 ABCC8Q09428 1581 aa30.35■■■□□ 2.45
ZNF397-204ENST00000585800 THOC2Q8NI27 1593 aaKnown RBP30.34■■■□□ 2.45
ZNF397-204ENST00000585800 CUX1P39880 1505 aa30.24■■■□□ 2.43
ZNF397-204ENST00000585800 WRNQ14191 1432 aaPredicted RBP eCLIP30.23■■■□□ 2.43
ZNF397-204ENST00000585800 TOPBP1Q92547 1522 aa30.23■■■□□ 2.43
ZNF397-204ENST00000585800 WDR62O43379 1518 aa30.22■■■□□ 2.43
ZNF397-204ENST00000585800 DNMBPQ6XZF7 1577 aa30.17■■■□□ 2.42
ZNF397-204ENST00000585800 SYNJ1O43426 1573 aa30.14■■■□□ 2.42
ZNF397-204ENST00000585800 TOP2BQ02880 1626 aa30.06■■■□□ 2.4
ZNF397-204ENST00000585800 CHIC1Q5VXU3 224 aa30.05■■■□□ 2.4
ZNF397-204ENST00000585800 CUX2O14529 1486 aa30.03■■■□□ 2.4
ZNF397-204ENST00000585800 POLA1P09884 1462 aaPredicted RBP30.03■■■□□ 2.4
ZNF397-204ENST00000585800 FGD5Q6ZNL6 1462 aa30.03■■■□□ 2.4
ZNF397-204ENST00000585800 BIVM-ERCC5R4GMW8 1640 aa30.02■■■□□ 2.4
ZNF397-204ENST00000585800 TRIM41Q8WV44 630 aa30■■■□□ 2.39
ZNF397-204ENST00000585800 RAD54L2Q9Y4B4 1467 aa29.96■■■□□ 2.39
ZNF397-204ENST00000585800 SOGA1O94964 1423 aa29.94■■■□□ 2.38
ZNF397-204ENST00000585800 TARBP1Q13395 1621 aaKnown RBP29.85■■■□□ 2.37
ZNF397-204ENST00000585800 IFT140Q96RY7 1462 aa29.84■■■□□ 2.37
ZNF397-204ENST00000585800 ZNF608Q9ULD9 1512 aaPredicted RBP29.81■■■□□ 2.36
ZNF397-204ENST00000585800 TDRD9Q8NDG6 1382 aaKnown RBP29.78■■■□□ 2.36
ZNF397-204ENST00000585800 ABCA10Q8WWZ4 1543 aa29.73■■■□□ 2.35
ZNF397-204ENST00000585800 AQRO60306 1485 aaKnown RBP eCLIP29.72■■■□□ 2.358e-7■■■■■ 28.7
ZNF397-204ENST00000585800 WDR97A6NE52 1622 aa29.67■■■□□ 2.34
ZNF397-204ENST00000585800 RUSC2Q8N2Y8 1516 aa29.61■■■□□ 2.33
ZNF397-204ENST00000585800 EIF4G3O43432 1585 aaKnown RBP29.59■■■□□ 2.33
ZNF397-204ENST00000585800 GAPVD1Q14C86 1478 aa29.56■■■□□ 2.32
ZNF397-204ENST00000585800 ABCA5Q8WWZ7 1642 aa29.53■■■□□ 2.32
ZNF397-204ENST00000585800 KIF27Q86VH2 1401 aa29.52■■■□□ 2.32
ZNF397-204ENST00000585800 FAM9AQ8IZU1 332 aaPredicted RBP29.47■■■□□ 2.31
ZNF397-204ENST00000585800 IGF1RP08069 1367 aa29.45■■■□□ 2.3
ZNF397-204ENST00000585800 GRIN2BQ13224 1484 aa29.44■■■□□ 2.3
ZNF397-204ENST00000585800 PBRM1Q86U86 1689 aa29.39■■■□□ 2.3
ZNF397-204ENST00000585800 SNAPC4Q5SXM2 1469 aa29.36■■■□□ 2.29
ZNF397-204ENST00000585800 ERICH3Q5RHP9 1530 aa29.34■■■□□ 2.29
ZNF397-204ENST00000585800 CSRNP3Q8WYN3 585 aa29.32■■■□□ 2.28
ZNF397-204ENST00000585800 FBLN2P98095 1184 aa29.3■■■□□ 2.28
ZNF397-204ENST00000585800 MAGI1Q96QZ7 1491 aaPredicted RBP29.28■■■□□ 2.28
ZNF397-204ENST00000585800 EEA1Q15075 1411 aa29.24■■■□□ 2.27
ZNF397-204ENST00000585800 CARMIL1Q5VZK9 1371 aa29.24■■■□□ 2.27
ZNF397-204ENST00000585800 CHMP7Q8WUX9 453 aaPredicted RBP29.23■■■□□ 2.27
ZNF397-204ENST00000585800 FHAD1B1AJZ9 1412 aa29.21■■■□□ 2.27
ZNF397-204ENST00000585800 ADAMTS12P58397 1594 aa29.2■■■□□ 2.26
ZNF397-204ENST00000585800 SYNJ2O15056 1496 aa29.19■■■□□ 2.26
ZNF397-204ENST00000585800 CUL7Q14999 1698 aa29.14■■■□□ 2.26
ZNF397-204ENST00000585800 PRXQ9BXM0 1461 aa29.13■■■□□ 2.25
ZNF397-204ENST00000585800 CHD1O14646 1710 aa29.13■■■□□ 2.25
ZNF397-204ENST00000585800 EHMT2Q96KQ7 1210 aa29.12■■■□□ 2.25
ZNF397-204ENST00000585800 GRIN2AQ12879 1464 aa29.09■■■□□ 2.25
ZNF397-204ENST00000585800 RAPGEF2Q9Y4G8 1499 aa29.07■■■□□ 2.24
ZNF397-204ENST00000585800 OSCARQ8IYS5 282 aa29.05■■■□□ 2.24
ZNF397-204ENST00000585800 CEP170Q5SW79 1584 aa28.94■■■□□ 2.22
ZNF397-204ENST00000585800 LOC105371045A0A1W2PR82 267 aa28.93■■■□□ 2.22
ZNF397-204ENST00000585800 KIF21BO75037 1637 aa28.93■■■□□ 2.22
ZNF397-204ENST00000585800 NUP160Q12769 1436 aa28.93■■■□□ 2.22
ZNF397-204ENST00000585800 UBTFP17480 764 aaKnown RBP28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms