RNA–Protein interactions for RNA: ENST00000585653.1

ROGDI-202, Transcript of rogdi homolog, humanhuman

TSL 5

Gene ROGDI, Length 728 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROGDI-202ENST00000585653 NISCHQ9Y2I1 1504 aa70.47■■■■■ 8.87
ROGDI-202ENST00000585653 CCDC180Q9P1Z9 1646 aa62.78■■■■■ 7.64
ROGDI-202ENST00000585653 ABCC9O60706 1549 aa61.22■■■■■ 7.39
ROGDI-202ENST00000585653 RB1CC1Q8TDY2 1594 aa59.02■■■■■ 7.04
ROGDI-202ENST00000585653 NACADO15069 1562 aa58.95■■■■■ 7.03
ROGDI-202ENST00000585653 DCAF8L2P0C7V8 631 aa58.83■■■■■ 7.01
ROGDI-202ENST00000585653 ZCCHC6Q5VYS8 1495 aaKnown RBP58.71■■■■■ 6.99
ROGDI-202ENST00000585653 MYO15BQ96JP2 1530 aa58.59■■■■■ 6.97
ROGDI-202ENST00000585653 DCAF1Q9Y4B6 1507 aa58.35■■■■■ 6.93
ROGDI-202ENST00000585653 UNC13AQ9UPW8 1703 aa57.76■■■■■ 6.84
ROGDI-202ENST00000585653 SCRIBQ14160 1630 aa57.17■■■■■ 6.74
ROGDI-202ENST00000585653 PABPN1Q86U42 306 aaKnown RBP eCLIP57.15■■■■■ 6.74
ROGDI-202ENST00000585653 BICRAQ9NZM4 1560 aa57.14■■■■■ 6.74
ROGDI-202ENST00000585653 SHROOM4Q9ULL8 1493 aa56.64■■■■■ 6.66
ROGDI-202ENST00000585653 DNAJC5BQ9UF47 199 aa56.04■■■■■ 6.56
ROGDI-202ENST00000585653 EIF4G1Q04637 1599 aaKnown RBP55.67■■■■■ 6.5
ROGDI-202ENST00000585653 CC2D2AQ9P2K1 1620 aa55.45■■■■■ 6.47
ROGDI-202ENST00000585653 CECR2Q9BXF3 1484 aa55.03■■■■■ 6.4
ROGDI-202ENST00000585653 SMARCA4P51532 1647 aa54.72■■■■■ 6.35
ROGDI-202ENST00000585653 BAZ1AQ9NRL2 1556 aaPredicted RBP54.67■■■■■ 6.34
ROGDI-202ENST00000585653 SMARCA2P51531 1590 aa54.37■■■■■ 6.29
ROGDI-202ENST00000585653 ATAD2BQ9ULI0 1458 aa54.35■■■■■ 6.29
ROGDI-202ENST00000585653 NCAPD3P42695 1498 aa54.32■■■■■ 6.29
ROGDI-202ENST00000585653 MROH2BQ7Z745 1585 aa54.28■■■■■ 6.28
ROGDI-202ENST00000585653 PEG3Q9GZU2 1588 aa54.18■■■■■ 6.26
ROGDI-202ENST00000585653 HMGXB3Q12766 1538 aa54.12■■■■■ 6.25
ROGDI-202ENST00000585653 BAZ1BQ9UIG0 1483 aaKnown RBP53.95■■■■■ 6.23
ROGDI-202ENST00000585653 WIZO95785 1651 aa53.76■■■■■ 6.2
ROGDI-202ENST00000585653 RSF1Q96T23 1441 aaPredicted RBP53.65■■■■■ 6.18
ROGDI-202ENST00000585653 TOP2AP11388 1531 aaKnown RBP53.19■■■■■ 6.11
ROGDI-202ENST00000585653 NESP48681 1621 aa52.97■■■■■ 6.07
ROGDI-202ENST00000585653 LAMC3Q9Y6N6 1575 aa52.97■■■■■ 6.07
ROGDI-202ENST00000585653 ERCC6Q03468 1493 aa52.82■■■■■ 6.05
ROGDI-202ENST00000585653 CADPSQ9ULU8 1353 aa52.73■■■■■ 6.03
ROGDI-202ENST00000585653 PDS5BQ9NTI5 1447 aa52.57■■■■■ 6.01
ROGDI-202ENST00000585653 CCDC88BA6NC98 1476 aa52.51■■■■■ 6
ROGDI-202ENST00000585653 KIF21AQ7Z4S6 1674 aa52.48■■■■■ 5.99
ROGDI-202ENST00000585653 CFTRP13569 1480 aa52.43■■■■■ 5.98
ROGDI-202ENST00000585653 SUPT5HO00267 1087 aaKnown RBP52.33■■■■■ 5.97
ROGDI-202ENST00000585653 PRDM2Q13029 1718 aa52.27■■■■■ 5.96
ROGDI-202ENST00000585653 CUX2O14529 1486 aa52.26■■■■■ 5.96
ROGDI-202ENST00000585653 THOC2Q8NI27 1593 aaKnown RBP52.25■■■■■ 5.95
ROGDI-202ENST00000585653 FANCD2Q9BXW9 1451 aa52.14■■■■■ 5.94
ROGDI-202ENST00000585653 CEP164Q9UPV0 1460 aa52.11■■■■■ 5.93
ROGDI-202ENST00000585653 MRC2Q9UBG0 1479 aa52.01■■■■■ 5.92
ROGDI-202ENST00000585653 WDR62O43379 1518 aa51.85■■■■■ 5.89
ROGDI-202ENST00000585653 URB2Q14146 1524 aaKnown RBP51.59■■■■■ 5.85
ROGDI-202ENST00000585653 ABCC8Q09428 1581 aa51.4■■■■■ 5.82
ROGDI-202ENST00000585653 TOPBP1Q92547 1522 aa51.33■■■■■ 5.81
ROGDI-202ENST00000585653 DNMBPQ6XZF7 1577 aa51.32■■■■■ 5.81
ROGDI-202ENST00000585653 IFT140Q96RY7 1462 aa51.01■■■■■ 5.76
ROGDI-202ENST00000585653 CUX1P39880 1505 aa50.92■■■■■ 5.74
ROGDI-202ENST00000585653 POLA1P09884 1462 aaPredicted RBP50.88■■■■■ 5.74
ROGDI-202ENST00000585653 TARBP1Q13395 1621 aaKnown RBP50.79■■■■■ 5.72
ROGDI-202ENST00000585653 FGD5Q6ZNL6 1462 aa50.78■■■■■ 5.72
ROGDI-202ENST00000585653 ZNF608Q9ULD9 1512 aaPredicted RBP50.7■■■■■ 5.71
ROGDI-202ENST00000585653 SOGA1O94964 1423 aa50.68■■■■■ 5.7
ROGDI-202ENST00000585653 WRNQ14191 1432 aaPredicted RBP eCLIP50.63■■■■■ 5.7
ROGDI-202ENST00000585653 RAD54L2Q9Y4B4 1467 aa50.63■■■■■ 5.7
ROGDI-202ENST00000585653 EIF4G3O43432 1585 aaKnown RBP50.6■■■■■ 5.69
ROGDI-202ENST00000585653 BIVM-ERCC5R4GMW8 1640 aa50.6■■■■■ 5.69
ROGDI-202ENST00000585653 TOP2BQ02880 1626 aa50.57■■■■■ 5.69
ROGDI-202ENST00000585653 DNAJC5Q9H3Z4 198 aa50.53■■■■■ 5.68
ROGDI-202ENST00000585653 SYNJ1O43426 1573 aa50.51■■■■■ 5.68
ROGDI-202ENST00000585653 WDR97A6NE52 1622 aa50.47■■■■■ 5.67
ROGDI-202ENST00000585653 AQRO60306 1485 aaKnown RBP eCLIP50.43■■■■■ 5.661e-6■■■■■ 31.5
ROGDI-202ENST00000585653 TDRD9Q8NDG6 1382 aaKnown RBP50.34■■■■■ 5.65
ROGDI-202ENST00000585653 ABCA10Q8WWZ4 1543 aa50.29■■■■■ 5.64
ROGDI-202ENST00000585653 ABCA5Q8WWZ7 1642 aa50.12■■■■■ 5.61
ROGDI-202ENST00000585653 PBRM1Q86U86 1689 aa50.12■■■■■ 5.61
ROGDI-202ENST00000585653 GAPVD1Q14C86 1478 aa50.11■■■■■ 5.61
ROGDI-202ENST00000585653 GRIN2BQ13224 1484 aa50.1■■■■■ 5.61
ROGDI-202ENST00000585653 OSCARQ8IYS5 282 aa50.07■■■■■ 5.61
ROGDI-202ENST00000585653 CHD1O14646 1710 aa50.02■■■■■ 5.6
ROGDI-202ENST00000585653 SNAPC4Q5SXM2 1469 aa50.01■■■■■ 5.6
ROGDI-202ENST00000585653 MAGI1Q96QZ7 1491 aaPredicted RBP49.99■■■■■ 5.59
ROGDI-202ENST00000585653 FBLN2P98095 1184 aa49.85■■■■■ 5.57
ROGDI-202ENST00000585653 SYNJ2O15056 1496 aa49.77■■■■■ 5.56
ROGDI-202ENST00000585653 CHMP7Q8WUX9 453 aaPredicted RBP49.74■■■■■ 5.55
ROGDI-202ENST00000585653 ERICH3Q5RHP9 1530 aa49.73■■■■■ 5.55
ROGDI-202ENST00000585653 ADAMTS12P58397 1594 aa49.64■■■■■ 5.54
ROGDI-202ENST00000585653 KIF27Q86VH2 1401 aa49.6■■■■■ 5.53
ROGDI-202ENST00000585653 FHAD1B1AJZ9 1412 aa49.52■■■■■ 5.52
ROGDI-202ENST00000585653 TRIM41Q8WV44 630 aa49.47■■■■■ 5.51
ROGDI-202ENST00000585653 GRIN2AQ12879 1464 aa49.44■■■■■ 5.51
ROGDI-202ENST00000585653 CLASP1Q7Z460 1538 aa49.39■■■■■ 5.5
ROGDI-202ENST00000585653 CUL7Q14999 1698 aa49.35■■■■■ 5.49
ROGDI-202ENST00000585653 IGF1RP08069 1367 aa49.31■■■■■ 5.48
ROGDI-202ENST00000585653 RIMBP3CA6NJZ7 1639 aa49.31■■■■■ 5.48
ROGDI-202ENST00000585653 RIMBP3BA6NNM3 1639 aa49.31■■■■■ 5.48
ROGDI-202ENST00000585653 RIMBP3Q9UFD9 1639 aa49.31■■■■■ 5.48
ROGDI-202ENST00000585653 ARHGEF11O15085 1522 aa49.26■■■■■ 5.48
ROGDI-202ENST00000585653 CEP170Q5SW79 1584 aa49.2■■■■■ 5.47
ROGDI-202ENST00000585653 NUP160Q12769 1436 aa49.2■■■■■ 5.47
ROGDI-202ENST00000585653 RUSC2Q8N2Y8 1516 aa49.08■■■■■ 5.45
ROGDI-202ENST00000585653 CARMIL1Q5VZK9 1371 aa49.06■■■■■ 5.44
ROGDI-202ENST00000585653 SHROOM2Q13796 1616 aa48.91■■■■■ 5.42
ROGDI-202ENST00000585653 ARAP1Q96P48 1450 aa48.84■■■■■ 5.41
ROGDI-202ENST00000585653 CHIC1Q5VXU3 224 aa48.83■■■■■ 5.41
ROGDI-202ENST00000585653 RAPGEF2Q9Y4G8 1499 aa48.81■■■■■ 5.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms