RNA–Protein interactions for RNA: ENST00000585516.1

AC006557.4-201, humanhuman

BASIC

Gene AC006557.4, Length 830 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006557.4-201ENST00000585516 NISCHQ9Y2I1 1504 aa20.43■□□□□ 0.86
AC006557.4-201ENST00000585516 CCDC180Q9P1Z9 1646 aa18.52■□□□□ 0.56
AC006557.4-201ENST00000585516 ABCC9O60706 1549 aa18.51■□□□□ 0.55
AC006557.4-201ENST00000585516 RB1CC1Q8TDY2 1594 aa17.68■□□□□ 0.42
AC006557.4-201ENST00000585516 NACADO15069 1562 aa17.52■□□□□ 0.39
AC006557.4-201ENST00000585516 DNAJC5BQ9UF47 199 aa17.42■□□□□ 0.38
AC006557.4-201ENST00000585516 MYO15BQ96JP2 1530 aa17.26■□□□□ 0.35
AC006557.4-201ENST00000585516 UNC13AQ9UPW8 1703 aa17.24■□□□□ 0.35
AC006557.4-201ENST00000585516 CHIC1Q5VXU3 224 aa17.18■□□□□ 0.34
AC006557.4-201ENST00000585516 DCAF8L2P0C7V8 631 aa17.17■□□□□ 0.34
AC006557.4-201ENST00000585516 PABPN1Q86U42 306 aaKnown RBP eCLIP17.13■□□□□ 0.33
AC006557.4-201ENST00000585516 BICRAQ9NZM4 1560 aa17.09■□□□□ 0.33
AC006557.4-201ENST00000585516 SHROOM4Q9ULL8 1493 aa17.02■□□□□ 0.32
AC006557.4-201ENST00000585516 DCAF1Q9Y4B6 1507 aa16.96■□□□□ 0.3
AC006557.4-201ENST00000585516 ZCCHC6Q5VYS8 1495 aaKnown RBP16.91■□□□□ 0.3
AC006557.4-201ENST00000585516 AEBP2Q6ZN18 517 aaPredicted RBP16.82■□□□□ 0.28
AC006557.4-201ENST00000585516 CC2D2AQ9P2K1 1620 aa16.77■□□□□ 0.27
AC006557.4-201ENST00000585516 CECR2Q9BXF3 1484 aa16.74■□□□□ 0.27
AC006557.4-201ENST00000585516 SCRIBQ14160 1630 aa16.72■□□□□ 0.27
AC006557.4-201ENST00000585516 EIF4G1Q04637 1599 aaKnown RBP16.71■□□□□ 0.27
AC006557.4-201ENST00000585516 DNAJC5Q9H3Z4 198 aa16.25■□□□□ 0.19
AC006557.4-201ENST00000585516 CUX2O14529 1486 aa16.16■□□□□ 0.18
AC006557.4-201ENST00000585516 NCAPD3P42695 1498 aa16.13■□□□□ 0.17
AC006557.4-201ENST00000585516 ERCC6Q03468 1493 aa16.07■□□□□ 0.16
AC006557.4-201ENST00000585516 SMARCA2P51531 1590 aa16.04■□□□□ 0.16
AC006557.4-201ENST00000585516 HMGXB3Q12766 1538 aa16.04■□□□□ 0.16
AC006557.4-201ENST00000585516 ATAD2BQ9ULI0 1458 aa16.02■□□□□ 0.15
AC006557.4-201ENST00000585516 SMARCA4P51532 1647 aa15.99■□□□□ 0.15
AC006557.4-201ENST00000585516 BAZ1AQ9NRL2 1556 aaPredicted RBP15.92■□□□□ 0.14
AC006557.4-201ENST00000585516 PEG3Q9GZU2 1588 aa15.89■□□□□ 0.13
AC006557.4-201ENST00000585516 BAZ1BQ9UIG0 1483 aaKnown RBP15.88■□□□□ 0.13
AC006557.4-201ENST00000585516 LAMC3Q9Y6N6 1575 aa15.84■□□□□ 0.13
AC006557.4-201ENST00000585516 NESP48681 1621 aa15.83■□□□□ 0.12
AC006557.4-201ENST00000585516 THOC2Q8NI27 1593 aaKnown RBP15.81■□□□□ 0.12
AC006557.4-201ENST00000585516 PDS5BQ9NTI5 1447 aa15.73■□□□□ 0.11
AC006557.4-201ENST00000585516 KIF21AQ7Z4S6 1674 aa15.7■□□□□ 0.1
AC006557.4-201ENST00000585516 MROH2BQ7Z745 1585 aa15.68■□□□□ 0.1
AC006557.4-201ENST00000585516 CADPSQ9ULU8 1353 aa15.61■□□□□ 0.09
AC006557.4-201ENST00000585516 MRC2Q9UBG0 1479 aa15.59■□□□□ 0.09
AC006557.4-201ENST00000585516 WDR62O43379 1518 aa15.57■□□□□ 0.08
AC006557.4-201ENST00000585516 WIZO95785 1651 aa15.5■□□□□ 0.07
AC006557.4-201ENST00000585516 CEP164Q9UPV0 1460 aa15.49■□□□□ 0.07
AC006557.4-201ENST00000585516 FANCD2Q9BXW9 1451 aa15.43■□□□□ 0.06
AC006557.4-201ENST00000585516 CFTRP13569 1480 aa15.41■□□□□ 0.06
AC006557.4-201ENST00000585516 TRIM41Q8WV44 630 aa15.38■□□□□ 0.05
AC006557.4-201ENST00000585516 TOP2AP11388 1531 aaKnown RBP15.35■□□□□ 0.05
AC006557.4-201ENST00000585516 PRDM2Q13029 1718 aa15.34■□□□□ 0.05
AC006557.4-201ENST00000585516 OSCARQ8IYS5 282 aa15.31■□□□□ 0.04
AC006557.4-201ENST00000585516 RSF1Q96T23 1441 aaPredicted RBP15.3■□□□□ 0.04
AC006557.4-201ENST00000585516 URB2Q14146 1524 aaKnown RBP15.27■□□□□ 0.04
AC006557.4-201ENST00000585516 PHF23Q9BUL5 403 aaPredicted RBP15.24■□□□□ 0.03
AC006557.4-201ENST00000585516 IFT140Q96RY7 1462 aa15.2■□□□□ 0.02
AC006557.4-201ENST00000585516 ABCC8Q09428 1581 aa15.17■□□□□ 0.02
AC006557.4-201ENST00000585516 RIMBP3CA6NJZ7 1639 aa15.14■□□□□ 0.01
AC006557.4-201ENST00000585516 RIMBP3BA6NNM3 1639 aa15.14■□□□□ 0.01
AC006557.4-201ENST00000585516 RIMBP3Q9UFD9 1639 aa15.14■□□□□ 0.01
AC006557.4-201ENST00000585516 CCDC88BA6NC98 1476 aa15.11■□□□□ 0.01
AC006557.4-201ENST00000585516 TOPBP1Q92547 1522 aa15.11■□□□□ 0.01
AC006557.4-201ENST00000585516 ZNF608Q9ULD9 1512 aaPredicted RBP15.09■□□□□ 0.01
AC006557.4-201ENST00000585516 ARHGEF11O15085 1522 aa15.08■□□□□ 0.01
AC006557.4-201ENST00000585516 EIF4G3O43432 1585 aaKnown RBP15.08■□□□□ 0
AC006557.4-201ENST00000585516 DNMBPQ6XZF7 1577 aa15.08■□□□□ 0
AC006557.4-201ENST00000585516 TARBP1Q13395 1621 aaKnown RBP15.01□□□□□ -0.01
AC006557.4-201ENST00000585516 CHD1O14646 1710 aa15□□□□□ -0.01
AC006557.4-201ENST00000585516 WDR97A6NE52 1622 aa14.98□□□□□ -0.01
AC006557.4-201ENST00000585516 POLA1P09884 1462 aaPredicted RBP14.95□□□□□ -0.02
AC006557.4-201ENST00000585516 AQRO60306 1485 aaKnown RBP eCLIP14.93□□□□□ -0.02
AC006557.4-201ENST00000585516 CYB5RLQ6IPT4 315 aa14.9□□□□□ -0.02
AC006557.4-201ENST00000585516 ARAP1Q96P48 1450 aa14.89□□□□□ -0.03
AC006557.4-201ENST00000585516 SOGA1O94964 1423 aa14.85□□□□□ -0.03
AC006557.4-201ENST00000585516 MAGI1Q96QZ7 1491 aaPredicted RBP14.85□□□□□ -0.03
AC006557.4-201ENST00000585516 FBLN2P98095 1184 aa14.85□□□□□ -0.03
AC006557.4-201ENST00000585516 SYNJ1O43426 1573 aa14.85□□□□□ -0.03
AC006557.4-201ENST00000585516 CLASP1Q7Z460 1538 aa14.83□□□□□ -0.04
AC006557.4-201ENST00000585516 RAD54L2Q9Y4B4 1467 aa14.82□□□□□ -0.04
AC006557.4-201ENST00000585516 SNAPC4Q5SXM2 1469 aa14.82□□□□□ -0.04
AC006557.4-201ENST00000585516 FGD5Q6ZNL6 1462 aa14.82□□□□□ -0.04
AC006557.4-201ENST00000585516 TRHP20396 242 aaPredicted RBP14.81□□□□□ -0.04
AC006557.4-201ENST00000585516 TDRD9Q8NDG6 1382 aaKnown RBP14.8□□□□□ -0.04
AC006557.4-201ENST00000585516 GRIN2BQ13224 1484 aa14.8□□□□□ -0.04
AC006557.4-201ENST00000585516 SYNJ2O15056 1496 aa14.78□□□□□ -0.04
AC006557.4-201ENST00000585516 CHMP7Q8WUX9 453 aaPredicted RBP14.76□□□□□ -0.05
AC006557.4-201ENST00000585516 CUX1P39880 1505 aa14.76□□□□□ -0.05
AC006557.4-201ENST00000585516 PBRM1Q86U86 1689 aa14.74□□□□□ -0.05
AC006557.4-201ENST00000585516 GAPVD1Q14C86 1478 aa14.69□□□□□ -0.06
AC006557.4-201ENST00000585516 ABCA10Q8WWZ4 1543 aa14.68□□□□□ -0.06
AC006557.4-201ENST00000585516 ABCA5Q8WWZ7 1642 aa14.68□□□□□ -0.06
AC006557.4-201ENST00000585516 GRIN2AQ12879 1464 aa14.59□□□□□ -0.07
AC006557.4-201ENST00000585516 WRNQ14191 1432 aaPredicted RBP eCLIP14.58□□□□□ -0.07
AC006557.4-201ENST00000585516 ADAMTS12P58397 1594 aa14.57□□□□□ -0.08
AC006557.4-201ENST00000585516 NUP160Q12769 1436 aa14.56□□□□□ -0.08
AC006557.4-201ENST00000585516 BIVM-ERCC5R4GMW8 1640 aa14.55□□□□□ -0.08
AC006557.4-201ENST00000585516 SHROOM2Q13796 1616 aa14.55□□□□□ -0.08
AC006557.4-201ENST00000585516 TOP2BQ02880 1626 aa14.54□□□□□ -0.08
AC006557.4-201ENST00000585516 CEP170Q5SW79 1584 aa14.53□□□□□ -0.08
AC006557.4-201ENST00000585516 ERICH3Q5RHP9 1530 aa14.52□□□□□ -0.08
AC006557.4-201ENST00000585516 FHAD1B1AJZ9 1412 aa14.52□□□□□ -0.08
AC006557.4-201ENST00000585516 ERCC6L2Q5T890 1561 aa14.48□□□□□ -0.09
AC006557.4-201ENST00000585516 KIF13AQ9H1H9 1805 aa14.43□□□□□ -0.1
AC006557.4-201ENST00000585516 PRG4Q92954 1404 aaPredicted RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms