RNA–Protein interactions for RNA: ENST00000585505.1

NBR1-203, Transcript of NBR1, autophagy cargo receptor, humanhuman

TSL 2

Gene NBR1, Length 3,295 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBR1-203ENST00000585505 NISCHQ9Y2I1 1504 aa17.04■□□□□ 0.32
NBR1-203ENST00000585505 SLC24A1O60721 1099 aa16.11■□□□□ 0.17
NBR1-203ENST00000585505 CCDC180Q9P1Z9 1646 aa15.03■□□□□ -0
NBR1-203ENST00000585505 DAXXQ9UER7 740 aaPredicted RBP14.72□□□□□ -0.05
NBR1-203ENST00000585505 EHMT2Q96KQ7 1210 aa14.7□□□□□ -0.06
NBR1-203ENST00000585505 PRKCSHP14314 528 aaPredicted RBP14.65□□□□□ -0.06
NBR1-203ENST00000585505 MYT1Q01538 1121 aa14.58□□□□□ -0.08
NBR1-203ENST00000585505 PLPPR3Q6T4P5 718 aa14.56□□□□□ -0.08
NBR1-203ENST00000585505 HRCP23327 699 aa14.44□□□□□ -0.1
NBR1-203ENST00000585505 TTBK1Q5TCY1 1321 aaPredicted RBP14.43□□□□□ -0.1
NBR1-203ENST00000585505 PELP1Q8IZL8 1130 aaKnown RBP14.4□□□□□ -0.1
NBR1-203ENST00000585505 APLP2Q06481 763 aa14.39□□□□□ -0.11
NBR1-203ENST00000585505 RTN4Q9NQC3 1192 aaKnown RBP14.37□□□□□ -0.11
NBR1-203ENST00000585505 ZCCHC6Q5VYS8 1495 aaKnown RBP14.35□□□□□ -0.11
NBR1-203ENST00000585505 PPARGC1BQ86YN6 1023 aaKnown RBP14.32□□□□□ -0.12
NBR1-203ENST00000585505 SHROOM4Q9ULL8 1493 aa14.3□□□□□ -0.12
NBR1-203ENST00000585505 SUPT5HO00267 1087 aaKnown RBP14.25□□□□□ -0.13
NBR1-203ENST00000585505 ERICH6Q7L0X2 663 aa14.25□□□□□ -0.13
NBR1-203ENST00000585505 PCGF6Q9BYE7 350 aa14.22□□□□□ -0.13
NBR1-203ENST00000585505 NCBP3Q53F19 620 aaKnown RBP14.21□□□□□ -0.13
NBR1-203ENST00000585505 DCAF1Q9Y4B6 1507 aa14.19□□□□□ -0.14
NBR1-203ENST00000585505 MYO15BQ96JP2 1530 aa14.08□□□□□ -0.16
NBR1-203ENST00000585505 CHIC1Q5VXU3 224 aa14.07□□□□□ -0.16
NBR1-203ENST00000585505 ABCC9O60706 1549 aa13.91□□□□□ -0.18
NBR1-203ENST00000585505 NACADO15069 1562 aa13.86□□□□□ -0.19
NBR1-203ENST00000585505 TIMELESSQ9UNS1 1208 aa13.8□□□□□ -0.2
NBR1-203ENST00000585505 SCAF1Q9H7N4 1312 aaKnown RBP13.77□□□□□ -0.2
NBR1-203ENST00000585505 UNC13AQ9UPW8 1703 aa13.76□□□□□ -0.21
NBR1-203ENST00000585505 LOC105371045A0A1W2PR82 267 aa13.73□□□□□ -0.21
NBR1-203ENST00000585505 RB1CC1Q8TDY2 1594 aa13.71□□□□□ -0.21
NBR1-203ENST00000585505 AMER1Q5JTC6 1135 aaPredicted RBP13.67□□□□□ -0.22
NBR1-203ENST00000585505 EIF5BO60841 1220 aaKnown RBP13.67□□□□□ -0.22
NBR1-203ENST00000585505 ARXQ96QS3 562 aa13.67□□□□□ -0.22
NBR1-203ENST00000585505 KCNA4P22459 653 aa13.65□□□□□ -0.22
NBR1-203ENST00000585505 SCRIBQ14160 1630 aa13.63□□□□□ -0.23
NBR1-203ENST00000585505 TRIM26Q12899 539 aaPredicted RBP13.61□□□□□ -0.23
NBR1-203ENST00000585505 AEBP2Q6ZN18 517 aaPredicted RBP13.6□□□□□ -0.23
NBR1-203ENST00000585505 KLHL34Q8N239 644 aa13.57□□□□□ -0.24
NBR1-203ENST00000585505 TULP1O00294 542 aaPredicted RBP13.56□□□□□ -0.24
NBR1-203ENST00000585505 DCAF8L2P0C7V8 631 aa13.53□□□□□ -0.24
NBR1-203ENST00000585505 RANGAP1P46060 587 aaPredicted RBP13.48□□□□□ -0.25
NBR1-203ENST00000585505 BICRAQ9NZM4 1560 aa13.48□□□□□ -0.25
NBR1-203ENST00000585505 PLEKHG5O94827 1062 aa13.45□□□□□ -0.26
NBR1-203ENST00000585505 ZEB1P37275 1124 aaPredicted RBP13.45□□□□□ -0.26
NBR1-203ENST00000585505 CSRNP3Q8WYN3 585 aa13.42□□□□□ -0.26
NBR1-203ENST00000585505 NEUROD1Q13562 356 aa13.38□□□□□ -0.27
NBR1-203ENST00000585505 ACIN1Q9UKV3 1341 aaKnown RBP13.36□□□□□ -0.27
NBR1-203ENST00000585505 TAOK2Q9UL54 1235 aa13.32□□□□□ -0.28
NBR1-203ENST00000585505 GTF3C3Q9Y5Q9 886 aa13.31□□□□□ -0.28
NBR1-203ENST00000585505 PODXL2Q9NZ53 605 aa13.29□□□□□ -0.28
NBR1-203ENST00000585505 HOMEZQ8IX15 550 aa13.28□□□□□ -0.28
NBR1-203ENST00000585505 FAM9AQ8IZU1 332 aaPredicted RBP13.24□□□□□ -0.29
NBR1-203ENST00000585505 BCL11AQ9H165 835 aa13.23□□□□□ -0.29
NBR1-203ENST00000585505 CECR2Q9BXF3 1484 aa13.2□□□□□ -0.3
NBR1-203ENST00000585505 TPRNQ4KMQ1 711 aa13.18□□□□□ -0.3
NBR1-203ENST00000585505 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.17□□□□□ -0.3
NBR1-203ENST00000585505 SMARCA4P51532 1647 aa13.16□□□□□ -0.3
NBR1-203ENST00000585505 MROH2BQ7Z745 1585 aa13.16□□□□□ -0.3
NBR1-203ENST00000585505 CENPBP07199 599 aaPredicted RBP13.14□□□□□ -0.31
NBR1-203ENST00000585505 RSF1Q96T23 1441 aaPredicted RBP13.14□□□□□ -0.31
NBR1-203ENST00000585505 BAZ1AQ9NRL2 1556 aaPredicted RBP13.12□□□□□ -0.31
NBR1-203ENST00000585505 DIEXFQ68CQ4 756 aaKnown RBP13.11□□□□□ -0.31
NBR1-203ENST00000585505 WIZO95785 1651 aa13.1□□□□□ -0.31
NBR1-203ENST00000585505 CCER1Q8TC90 406 aaPredicted RBP13.1□□□□□ -0.31
NBR1-203ENST00000585505 PEG3Q9GZU2 1588 aa13.09□□□□□ -0.31
NBR1-203ENST00000585505 TRIM41Q8WV44 630 aa13.07□□□□□ -0.32
NBR1-203ENST00000585505 YTHDC1Q96MU7 727 aaKnown RBP13.06□□□□□ -0.32
NBR1-203ENST00000585505 PABPN1Q86U42 306 aaKnown RBP eCLIP12.99□□□□□ -0.33
NBR1-203ENST00000585505 BCANQ96GW7 911 aa12.96□□□□□ -0.33
NBR1-203ENST00000585505 PHF23Q9BUL5 403 aaPredicted RBP12.96□□□□□ -0.33
NBR1-203ENST00000585505 EIF4G1Q04637 1599 aaKnown RBP12.94□□□□□ -0.34
NBR1-203ENST00000585505 NPM2Q86SE8 214 aaKnown RBP12.94□□□□□ -0.34
NBR1-203ENST00000585505 TOP2AP11388 1531 aaKnown RBP12.93□□□□□ -0.34
NBR1-203ENST00000585505 C14orf37Q86TY3 774 aa12.86□□□□□ -0.35
NBR1-203ENST00000585505 ATAD2BQ9ULI0 1458 aa12.85□□□□□ -0.35
NBR1-203ENST00000585505 SMARCA2P51531 1590 aa12.85□□□□□ -0.35
NBR1-203ENST00000585505 HMGXB3Q12766 1538 aa12.82□□□□□ -0.36
NBR1-203ENST00000585505 ZNF316A6NFI3 1004 aaPredicted RBP12.81□□□□□ -0.36
NBR1-203ENST00000585505 MIER1Q8N108 512 aa12.81□□□□□ -0.36
NBR1-203ENST00000585505 CC2D2AQ9P2K1 1620 aa12.77□□□□□ -0.37
NBR1-203ENST00000585505 NCAPD3P42695 1498 aa12.76□□□□□ -0.37
NBR1-203ENST00000585505 CCDC88BA6NC98 1476 aa12.73□□□□□ -0.37
NBR1-203ENST00000585505 PLCB2Q00722 1185 aa12.72□□□□□ -0.37
NBR1-203ENST00000585505 HAP1P54257 671 aaPredicted RBP12.7□□□□□ -0.38
NBR1-203ENST00000585505 BAZ1BQ9UIG0 1483 aaKnown RBP12.7□□□□□ -0.38
NBR1-203ENST00000585505 PRDM2Q13029 1718 aa12.69□□□□□ -0.38
NBR1-203ENST00000585505 PDIA4P13667 645 aaKnown RBP12.68□□□□□ -0.38
NBR1-203ENST00000585505 TMEM132AQ24JP5 1023 aa12.61□□□□□ -0.39
NBR1-203ENST00000585505 ANP32EQ9BTT0 268 aa12.61□□□□□ -0.39
NBR1-203ENST00000585505 SUPT16HQ9Y5B9 1047 aaKnown RBP12.61□□□□□ -0.39
NBR1-203ENST00000585505 TSHZ2Q9NRE2 1034 aa12.59□□□□□ -0.39
NBR1-203ENST00000585505 HNRNPUL2Q1KMD3 747 aaKnown RBP12.57□□□□□ -0.4
NBR1-203ENST00000585505 CHMP4AQ9BY43 222 aa12.53□□□□□ -0.4
NBR1-203ENST00000585505 UBE2Q2Q8WVN8 375 aa12.51□□□□□ -0.41
NBR1-203ENST00000585505 UBTFP17480 764 aaKnown RBP12.49□□□□□ -0.41
NBR1-203ENST00000585505 CEP162Q5TB80 1403 aa12.49□□□□□ -0.41
NBR1-203ENST00000585505 DHX37Q8IY37 1157 aaKnown RBP12.48□□□□□ -0.41
NBR1-203ENST00000585505 SLC4A1APQ9BWU0 796 aaKnown RBP12.48□□□□□ -0.41
NBR1-203ENST00000585505 FBXO3Q9UK99 471 aa12.48□□□□□ -0.41
NBR1-203ENST00000585505 CFTRP13569 1480 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms