RNA–Protein interactions for RNA: ENST00000585348.1

GRN-202, Transcript of granulin precursor, humanhuman

TSL 2

Gene GRN, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-202ENST00000585348 NISCHQ9Y2I1 1504 aa29.58■■■□□ 2.33
GRN-202ENST00000585348 CCDC180Q9P1Z9 1646 aa26.5■■□□□ 1.83
GRN-202ENST00000585348 ABCC9O60706 1549 aa26.37■■□□□ 1.81
GRN-202ENST00000585348 RB1CC1Q8TDY2 1594 aa25.14■■□□□ 1.61
GRN-202ENST00000585348 NACADO15069 1562 aa24.98■■□□□ 1.59
GRN-202ENST00000585348 DCAF8L2P0C7V8 631 aa24.87■■□□□ 1.57
GRN-202ENST00000585348 MYO15BQ96JP2 1530 aa24.66■■□□□ 1.54
GRN-202ENST00000585348 UNC13AQ9UPW8 1703 aa24.65■■□□□ 1.54
GRN-202ENST00000585348 ZCCHC6Q5VYS8 1495 aaKnown RBP24.57■■□□□ 1.52
GRN-202ENST00000585348 DNAJC5BQ9UF47 199 aa24.55■■□□□ 1.52
GRN-202ENST00000585348 PABPN1Q86U42 306 aaKnown RBP eCLIP24.54■■□□□ 1.52
GRN-202ENST00000585348 BICRAQ9NZM4 1560 aa24.43■■□□□ 1.5
GRN-202ENST00000585348 DCAF1Q9Y4B6 1507 aa24.41■■□□□ 1.5
GRN-202ENST00000585348 SCRIBQ14160 1630 aa24.21■■□□□ 1.47
GRN-202ENST00000585348 SHROOM4Q9ULL8 1493 aa24.06■■□□□ 1.44
GRN-202ENST00000585348 CC2D2AQ9P2K1 1620 aa23.83■■□□□ 1.41
GRN-202ENST00000585348 EIF4G1Q04637 1599 aaKnown RBP23.82■■□□□ 1.4
GRN-202ENST00000585348 CECR2Q9BXF3 1484 aa23.71■■□□□ 1.39
GRN-202ENST00000585348 SMARCA4P51532 1647 aa23.08■■□□□ 1.28
GRN-202ENST00000585348 NCAPD3P42695 1498 aa23.04■■□□□ 1.28
GRN-202ENST00000585348 ATAD2BQ9ULI0 1458 aa23.02■■□□□ 1.28
GRN-202ENST00000585348 SMARCA2P51531 1590 aa22.97■■□□□ 1.27
GRN-202ENST00000585348 BAZ1AQ9NRL2 1556 aaPredicted RBP22.95■■□□□ 1.26
GRN-202ENST00000585348 HMGXB3Q12766 1538 aa22.92■■□□□ 1.26
GRN-202ENST00000585348 MROH2BQ7Z745 1585 aa22.82■■□□□ 1.24
GRN-202ENST00000585348 BAZ1BQ9UIG0 1483 aaKnown RBP22.82■■□□□ 1.24
GRN-202ENST00000585348 PEG3Q9GZU2 1588 aa22.81■■□□□ 1.24
GRN-202ENST00000585348 ERCC6Q03468 1493 aa22.74■■□□□ 1.23
GRN-202ENST00000585348 NESP48681 1621 aa22.71■■□□□ 1.23
GRN-202ENST00000585348 CUX2O14529 1486 aa22.63■■□□□ 1.21
GRN-202ENST00000585348 WIZO95785 1651 aa22.58■■□□□ 1.2
GRN-202ENST00000585348 LAMC3Q9Y6N6 1575 aa22.54■■□□□ 1.2
GRN-202ENST00000585348 THOC2Q8NI27 1593 aaKnown RBP22.46■■□□□ 1.19
GRN-202ENST00000585348 KIF21AQ7Z4S6 1674 aa22.45■■□□□ 1.18
GRN-202ENST00000585348 DNAJC5Q9H3Z4 198 aa22.44■■□□□ 1.18
GRN-202ENST00000585348 RSF1Q96T23 1441 aaPredicted RBP22.37■■□□□ 1.17
GRN-202ENST00000585348 PDS5BQ9NTI5 1447 aa22.37■■□□□ 1.17
GRN-202ENST00000585348 CADPSQ9ULU8 1353 aa22.35■■□□□ 1.17
GRN-202ENST00000585348 TOP2AP11388 1531 aaKnown RBP22.28■■□□□ 1.16
GRN-202ENST00000585348 MRC2Q9UBG0 1479 aa22.21■■□□□ 1.15
GRN-202ENST00000585348 WDR62O43379 1518 aa22.16■■□□□ 1.14
GRN-202ENST00000585348 CEP164Q9UPV0 1460 aa22.15■■□□□ 1.14
GRN-202ENST00000585348 CFTRP13569 1480 aa22.14■■□□□ 1.13
GRN-202ENST00000585348 FANCD2Q9BXW9 1451 aa22.14■■□□□ 1.13
GRN-202ENST00000585348 PRDM2Q13029 1718 aa22.02■■□□□ 1.12
GRN-202ENST00000585348 CCDC88BA6NC98 1476 aa22■■□□□ 1.11
GRN-202ENST00000585348 URB2Q14146 1524 aaKnown RBP21.96■■□□□ 1.11
GRN-202ENST00000585348 TOPBP1Q92547 1522 aa21.74■■□□□ 1.07
GRN-202ENST00000585348 IFT140Q96RY7 1462 aa21.68■■□□□ 1.06
GRN-202ENST00000585348 DNMBPQ6XZF7 1577 aa21.68■■□□□ 1.06
GRN-202ENST00000585348 ZNF608Q9ULD9 1512 aaPredicted RBP21.67■■□□□ 1.06
GRN-202ENST00000585348 ABCC8Q09428 1581 aa21.65■■□□□ 1.06
GRN-202ENST00000585348 EIF4G3O43432 1585 aaKnown RBP21.59■■□□□ 1.05
GRN-202ENST00000585348 OSCARQ8IYS5 282 aa21.56■■□□□ 1.04
GRN-202ENST00000585348 TARBP1Q13395 1621 aaKnown RBP21.55■■□□□ 1.04
GRN-202ENST00000585348 TRIM41Q8WV44 630 aa21.54■■□□□ 1.04
GRN-202ENST00000585348 POLA1P09884 1462 aaPredicted RBP21.53■■□□□ 1.04
GRN-202ENST00000585348 SUPT5HO00267 1087 aaKnown RBP21.49■■□□□ 1.03
GRN-202ENST00000585348 AQRO60306 1485 aaKnown RBP eCLIP21.46■■□□□ 1.03
GRN-202ENST00000585348 RAD54L2Q9Y4B4 1467 aa21.45■■□□□ 1.02
GRN-202ENST00000585348 CUX1P39880 1505 aa21.44■■□□□ 1.02
GRN-202ENST00000585348 FGD5Q6ZNL6 1462 aa21.42■■□□□ 1.02
GRN-202ENST00000585348 CHD1O14646 1710 aa21.41■■□□□ 1.02
GRN-202ENST00000585348 SOGA1O94964 1423 aa21.39■■□□□ 1.02
GRN-202ENST00000585348 RIMBP3CA6NJZ7 1639 aa21.37■■□□□ 1.01
GRN-202ENST00000585348 RIMBP3BA6NNM3 1639 aa21.37■■□□□ 1.01
GRN-202ENST00000585348 RIMBP3Q9UFD9 1639 aa21.37■■□□□ 1.01
GRN-202ENST00000585348 TDRD9Q8NDG6 1382 aaKnown RBP21.36■■□□□ 1.01
GRN-202ENST00000585348 WDR97A6NE52 1622 aa21.31■■□□□ 1
GRN-202ENST00000585348 ARHGEF11O15085 1522 aa21.3■■□□□ 1
GRN-202ENST00000585348 SNAPC4Q5SXM2 1469 aa21.28■■□□□ 1
GRN-202ENST00000585348 FBLN2P98095 1184 aa21.28■■□□□ 1
GRN-202ENST00000585348 PBRM1Q86U86 1689 aa21.21■□□□□ 0.99
GRN-202ENST00000585348 GRIN2BQ13224 1484 aa21.21■□□□□ 0.99
GRN-202ENST00000585348 MAGI1Q96QZ7 1491 aaPredicted RBP21.2■□□□□ 0.98
GRN-202ENST00000585348 ABCA5Q8WWZ7 1642 aa21.16■□□□□ 0.98
GRN-202ENST00000585348 ABCA10Q8WWZ4 1543 aa21.16■□□□□ 0.98
GRN-202ENST00000585348 GAPVD1Q14C86 1478 aa21.16■□□□□ 0.98
GRN-202ENST00000585348 BIVM-ERCC5R4GMW8 1640 aa21.14■□□□□ 0.97
GRN-202ENST00000585348 SYNJ1O43426 1573 aa21.13■□□□□ 0.97
GRN-202ENST00000585348 CLASP1Q7Z460 1538 aa21.13■□□□□ 0.97
GRN-202ENST00000585348 SYNJ2O15056 1496 aa21.13■□□□□ 0.97
GRN-202ENST00000585348 TOP2BQ02880 1626 aa21.12■□□□□ 0.97
GRN-202ENST00000585348 CHMP7Q8WUX9 453 aaPredicted RBP21.12■□□□□ 0.97
GRN-202ENST00000585348 ARAP1Q96P48 1450 aa21.12■□□□□ 0.97
GRN-202ENST00000585348 WRNQ14191 1432 aaPredicted RBP eCLIP21.11■□□□□ 0.97
GRN-202ENST00000585348 CYB5RLQ6IPT4 315 aa21.09■□□□□ 0.97
GRN-202ENST00000585348 ADAMTS12P58397 1594 aa21■□□□□ 0.95
GRN-202ENST00000585348 GRIN2AQ12879 1464 aa20.95■□□□□ 0.94
GRN-202ENST00000585348 CEP170Q5SW79 1584 aa20.91■□□□□ 0.94
GRN-202ENST00000585348 ERICH3Q5RHP9 1530 aa20.9■□□□□ 0.94
GRN-202ENST00000585348 FHAD1B1AJZ9 1412 aa20.88■□□□□ 0.93
GRN-202ENST00000585348 NUP160Q12769 1436 aa20.87■□□□□ 0.93
GRN-202ENST00000585348 ERCC6L2Q5T890 1561 aa20.84■□□□□ 0.93
GRN-202ENST00000585348 TRHP20396 242 aaPredicted RBP20.81■□□□□ 0.92
GRN-202ENST00000585348 SHROOM2Q13796 1616 aa20.78■□□□□ 0.92
GRN-202ENST00000585348 RUSC2Q8N2Y8 1516 aa20.71■□□□□ 0.91
GRN-202ENST00000585348 KIF27Q86VH2 1401 aa20.68■□□□□ 0.9
GRN-202ENST00000585348 CUL7Q14999 1698 aa20.66■□□□□ 0.9
GRN-202ENST00000585348 PRG4Q92954 1404 aaPredicted RBP20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms