RNA–Protein interactions for RNA: ENST00000585339.5

RANBP3-204, Transcript of RAN binding protein 3, humanhuman

TSL 4

Gene RANBP3, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-204ENST00000585339 NISCHQ9Y2I1 1504 aa19.75■□□□□ 0.75
RANBP3-204ENST00000585339 ABCC9O60706 1549 aa18.13■□□□□ 0.49
RANBP3-204ENST00000585339 CCDC180Q9P1Z9 1646 aa17.98■□□□□ 0.47
RANBP3-204ENST00000585339 DNAJC5BQ9UF47 199 aa17.27■□□□□ 0.36
RANBP3-204ENST00000585339 RB1CC1Q8TDY2 1594 aa17.15■□□□□ 0.34
RANBP3-204ENST00000585339 UNC13AQ9UPW8 1703 aa17.04■□□□□ 0.32
RANBP3-204ENST00000585339 NACADO15069 1562 aa16.94■□□□□ 0.3
RANBP3-204ENST00000585339 BICRAQ9NZM4 1560 aa16.79■□□□□ 0.28
RANBP3-204ENST00000585339 PABPN1Q86U42 306 aaKnown RBP eCLIP16.74■□□□□ 0.27
RANBP3-204ENST00000585339 MYO15BQ96JP2 1530 aa16.6■□□□□ 0.25
RANBP3-204ENST00000585339 DCAF8L2P0C7V8 631 aa16.53■□□□□ 0.24
RANBP3-204ENST00000585339 CC2D2AQ9P2K1 1620 aa16.45■□□□□ 0.22
RANBP3-204ENST00000585339 SHROOM4Q9ULL8 1493 aa16.39■□□□□ 0.21
RANBP3-204ENST00000585339 CECR2Q9BXF3 1484 aa16.35■□□□□ 0.21
RANBP3-204ENST00000585339 ZCCHC6Q5VYS8 1495 aaKnown RBP16.35■□□□□ 0.21
RANBP3-204ENST00000585339 EIF4G1Q04637 1599 aaKnown RBP16.33■□□□□ 0.2
RANBP3-204ENST00000585339 SCRIBQ14160 1630 aa16.32■□□□□ 0.2
RANBP3-204ENST00000585339 DCAF1Q9Y4B6 1507 aa16.29■□□□□ 0.2
RANBP3-204ENST00000585339 DNAJC5Q9H3Z4 198 aa15.99■□□□□ 0.15
RANBP3-204ENST00000585339 CUX2O14529 1486 aa15.74■□□□□ 0.11
RANBP3-204ENST00000585339 ERCC6Q03468 1493 aa15.61■□□□□ 0.09
RANBP3-204ENST00000585339 NCAPD3P42695 1498 aa15.6■□□□□ 0.09
RANBP3-204ENST00000585339 NESP48681 1621 aa15.55■□□□□ 0.08
RANBP3-204ENST00000585339 THOC2Q8NI27 1593 aaKnown RBP15.55■□□□□ 0.08
RANBP3-204ENST00000585339 SMARCA4P51532 1647 aa15.54■□□□□ 0.08
RANBP3-204ENST00000585339 HMGXB3Q12766 1538 aa15.54■□□□□ 0.08
RANBP3-204ENST00000585339 ATAD2BQ9ULI0 1458 aa15.53■□□□□ 0.08
RANBP3-204ENST00000585339 SMARCA2P51531 1590 aa15.48■□□□□ 0.07
RANBP3-204ENST00000585339 KIF21AQ7Z4S6 1674 aa15.48■□□□□ 0.07
RANBP3-204ENST00000585339 PEG3Q9GZU2 1588 aa15.4■□□□□ 0.06
RANBP3-204ENST00000585339 LAMC3Q9Y6N6 1575 aa15.36■□□□□ 0.05
RANBP3-204ENST00000585339 BAZ1BQ9UIG0 1483 aaKnown RBP15.35■□□□□ 0.05
RANBP3-204ENST00000585339 BAZ1AQ9NRL2 1556 aaPredicted RBP15.33■□□□□ 0.05
RANBP3-204ENST00000585339 MROH2BQ7Z745 1585 aa15.24■□□□□ 0.03
RANBP3-204ENST00000585339 WDR62O43379 1518 aa15.18■□□□□ 0.02
RANBP3-204ENST00000585339 PDS5BQ9NTI5 1447 aa15.15■□□□□ 0.02
RANBP3-204ENST00000585339 MRC2Q9UBG0 1479 aa15.14■□□□□ 0.01
RANBP3-204ENST00000585339 TRIM41Q8WV44 630 aa15.13■□□□□ 0.01
RANBP3-204ENST00000585339 WIZO95785 1651 aa15.11■□□□□ 0.01
RANBP3-204ENST00000585339 CADPSQ9ULU8 1353 aa15.06■□□□□ 0
RANBP3-204ENST00000585339 CEP164Q9UPV0 1460 aa15□□□□□ -0.01
RANBP3-204ENST00000585339 PRDM2Q13029 1718 aa14.98□□□□□ -0.01
RANBP3-204ENST00000585339 FANCD2Q9BXW9 1451 aa14.95□□□□□ -0.02
RANBP3-204ENST00000585339 RIMBP3CA6NJZ7 1639 aa14.93□□□□□ -0.02
RANBP3-204ENST00000585339 RIMBP3BA6NNM3 1639 aa14.93□□□□□ -0.02
RANBP3-204ENST00000585339 RIMBP3Q9UFD9 1639 aa14.93□□□□□ -0.02
RANBP3-204ENST00000585339 URB2Q14146 1524 aaKnown RBP14.92□□□□□ -0.02
RANBP3-204ENST00000585339 CFTRP13569 1480 aa14.89□□□□□ -0.03
RANBP3-204ENST00000585339 TOP2AP11388 1531 aaKnown RBP14.84□□□□□ -0.03
RANBP3-204ENST00000585339 OSCARQ8IYS5 282 aa14.8□□□□□ -0.04
RANBP3-204ENST00000585339 ARHGEF11O15085 1522 aa14.78□□□□□ -0.04
RANBP3-204ENST00000585339 ZNF608Q9ULD9 1512 aaPredicted RBP14.78□□□□□ -0.04
RANBP3-204ENST00000585339 CHD1O14646 1710 aa14.78□□□□□ -0.04
RANBP3-204ENST00000585339 EIF4G3O43432 1585 aaKnown RBP14.76□□□□□ -0.05
RANBP3-204ENST00000585339 RSF1Q96T23 1441 aaPredicted RBP14.75□□□□□ -0.05
RANBP3-204ENST00000585339 IFT140Q96RY7 1462 aa14.69□□□□□ -0.06
RANBP3-204ENST00000585339 TOPBP1Q92547 1522 aa14.67□□□□□ -0.06
RANBP3-204ENST00000585339 TARBP1Q13395 1621 aaKnown RBP14.66□□□□□ -0.06
RANBP3-204ENST00000585339 ARAP1Q96P48 1450 aa14.63□□□□□ -0.07
RANBP3-204ENST00000585339 DNMBPQ6XZF7 1577 aa14.63□□□□□ -0.07
RANBP3-204ENST00000585339 CCDC88BA6NC98 1476 aa14.61□□□□□ -0.07
RANBP3-204ENST00000585339 AQRO60306 1485 aaKnown RBP eCLIP14.53□□□□□ -0.082e-8■■■■■ 27.6
RANBP3-204ENST00000585339 ABCC8Q09428 1581 aa14.51□□□□□ -0.09
RANBP3-204ENST00000585339 POLA1P09884 1462 aaPredicted RBP14.51□□□□□ -0.09
RANBP3-204ENST00000585339 CYB5RLQ6IPT4 315 aa14.51□□□□□ -0.09
RANBP3-204ENST00000585339 CLASP1Q7Z460 1538 aa14.51□□□□□ -0.09
RANBP3-204ENST00000585339 WDR97A6NE52 1622 aa14.47□□□□□ -0.09
RANBP3-204ENST00000585339 RAD54L2Q9Y4B4 1467 aa14.44□□□□□ -0.1
RANBP3-204ENST00000585339 PBRM1Q86U86 1689 aa14.42□□□□□ -0.1
RANBP3-204ENST00000585339 SNAPC4Q5SXM2 1469 aa14.42□□□□□ -0.1
RANBP3-204ENST00000585339 TRHP20396 242 aaPredicted RBP14.4□□□□□ -0.1
RANBP3-204ENST00000585339 SYNJ1O43426 1573 aa14.39□□□□□ -0.11
RANBP3-204ENST00000585339 FGD5Q6ZNL6 1462 aa14.37□□□□□ -0.11
RANBP3-204ENST00000585339 TDRD9Q8NDG6 1382 aaKnown RBP14.35□□□□□ -0.11
RANBP3-204ENST00000585339 FBLN2P98095 1184 aa14.35□□□□□ -0.11
RANBP3-204ENST00000585339 CUX1P39880 1505 aa14.35□□□□□ -0.11
RANBP3-204ENST00000585339 MAGI1Q96QZ7 1491 aaPredicted RBP14.34□□□□□ -0.11
RANBP3-204ENST00000585339 SOGA1O94964 1423 aa14.32□□□□□ -0.12
RANBP3-204ENST00000585339 SYNJ2O15056 1496 aa14.3□□□□□ -0.12
RANBP3-204ENST00000585339 ABCA5Q8WWZ7 1642 aa14.3□□□□□ -0.12
RANBP3-204ENST00000585339 ERCC6L2Q5T890 1561 aa14.29□□□□□ -0.12
RANBP3-204ENST00000585339 GRIN2BQ13224 1484 aa14.28□□□□□ -0.12
RANBP3-204ENST00000585339 KIF13AQ9H1H9 1805 aa14.28□□□□□ -0.12
RANBP3-204ENST00000585339 GAPVD1Q14C86 1478 aa14.26□□□□□ -0.13
RANBP3-204ENST00000585339 SHROOM2Q13796 1616 aa14.2□□□□□ -0.14
RANBP3-204ENST00000585339 CEP170Q5SW79 1584 aa14.2□□□□□ -0.14
RANBP3-204ENST00000585339 ADAMTS12P58397 1594 aa14.19□□□□□ -0.14
RANBP3-204ENST00000585339 CHMP7Q8WUX9 453 aaPredicted RBP14.19□□□□□ -0.14
RANBP3-204ENST00000585339 ABCA10Q8WWZ4 1543 aa14.17□□□□□ -0.14
RANBP3-204ENST00000585339 AEBP2Q6ZN18 517 aaPredicted RBP14.16□□□□□ -0.14
RANBP3-204ENST00000585339 GRIN2AQ12879 1464 aa14.14□□□□□ -0.15
RANBP3-204ENST00000585339 NUP160Q12769 1436 aa14.11□□□□□ -0.15
RANBP3-204ENST00000585339 BIVM-ERCC5R4GMW8 1640 aa14.11□□□□□ -0.15
RANBP3-204ENST00000585339 TOP2BQ02880 1626 aa14.04□□□□□ -0.16
RANBP3-204ENST00000585339 RUSC2Q8N2Y8 1516 aa14.02□□□□□ -0.16
RANBP3-204ENST00000585339 DIP2BQ9P265 1576 aa14□□□□□ -0.17
RANBP3-204ENST00000585339 TSPOAP1O95153 1857 aa13.99□□□□□ -0.17
RANBP3-204ENST00000585339 ERICH3Q5RHP9 1530 aa13.99□□□□□ -0.17
RANBP3-204ENST00000585339 ADCY10Q96PN6 1610 aa13.98□□□□□ -0.17
RANBP3-204ENST00000585339 FHAD1B1AJZ9 1412 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms