RNA–Protein interactions for RNA: ENST00000585265.1

PSMD11-211, Transcript of proteasome 26S subunit, non-ATPase 11, humanhuman

TSL 2

Gene PSMD11, Length 670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11-211ENST00000585265 NISCHQ9Y2I1 1504 aa28.64■■■□□ 2.18
PSMD11-211ENST00000585265 CCDC180Q9P1Z9 1646 aa25.61■■□□□ 1.69
PSMD11-211ENST00000585265 ABCC9O60706 1549 aa25.4■■□□□ 1.66
PSMD11-211ENST00000585265 RB1CC1Q8TDY2 1594 aa24.26■■□□□ 1.47
PSMD11-211ENST00000585265 NACADO15069 1562 aa24.14■■□□□ 1.45
PSMD11-211ENST00000585265 DCAF8L2P0C7V8 631 aa24.11■■□□□ 1.45
PSMD11-211ENST00000585265 MYO15BQ96JP2 1530 aa23.86■■□□□ 1.41
PSMD11-211ENST00000585265 UNC13AQ9UPW8 1703 aa23.8■■□□□ 1.4
PSMD11-211ENST00000585265 ZCCHC6Q5VYS8 1495 aaKnown RBP23.78■■□□□ 1.4
PSMD11-211ENST00000585265 PABPN1Q86U42 306 aaKnown RBP eCLIP23.69■■□□□ 1.38
PSMD11-211ENST00000585265 DCAF1Q9Y4B6 1507 aa23.65■■□□□ 1.38
PSMD11-211ENST00000585265 DNAJC5BQ9UF47 199 aa23.65■■□□□ 1.38
PSMD11-211ENST00000585265 BICRAQ9NZM4 1560 aa23.57■■□□□ 1.36
PSMD11-211ENST00000585265 SCRIBQ14160 1630 aa23.37■■□□□ 1.33
PSMD11-211ENST00000585265 SHROOM4Q9ULL8 1493 aa23.2■■□□□ 1.3
PSMD11-211ENST00000585265 CC2D2AQ9P2K1 1620 aa22.97■■□□□ 1.27
PSMD11-211ENST00000585265 EIF4G1Q04637 1599 aaKnown RBP22.96■■□□□ 1.27
PSMD11-211ENST00000585265 CECR2Q9BXF3 1484 aa22.84■■□□□ 1.25
PSMD11-211ENST00000585265 SMARCA4P51532 1647 aa22.31■■□□□ 1.16
PSMD11-211ENST00000585265 NCAPD3P42695 1498 aa22.28■■□□□ 1.16
PSMD11-211ENST00000585265 ATAD2BQ9ULI0 1458 aa22.26■■□□□ 1.15
PSMD11-211ENST00000585265 BAZ1AQ9NRL2 1556 aaPredicted RBP22.21■■□□□ 1.15
PSMD11-211ENST00000585265 SMARCA2P51531 1590 aa22.2■■□□□ 1.14
PSMD11-211ENST00000585265 HMGXB3Q12766 1538 aa22.14■■□□□ 1.13
PSMD11-211ENST00000585265 MROH2BQ7Z745 1585 aa22.09■■□□□ 1.13
PSMD11-211ENST00000585265 PEG3Q9GZU2 1588 aa22.08■■□□□ 1.12
PSMD11-211ENST00000585265 BAZ1BQ9UIG0 1483 aaKnown RBP22.05■■□□□ 1.12
PSMD11-211ENST00000585265 NESP48681 1621 aa21.9■■□□□ 1.1
PSMD11-211ENST00000585265 ERCC6Q03468 1493 aa21.89■■□□□ 1.09
PSMD11-211ENST00000585265 WIZO95785 1651 aa21.87■■□□□ 1.09
PSMD11-211ENST00000585265 CUX2O14529 1486 aa21.77■■□□□ 1.07
PSMD11-211ENST00000585265 LAMC3Q9Y6N6 1575 aa21.76■■□□□ 1.07
PSMD11-211ENST00000585265 RSF1Q96T23 1441 aaPredicted RBP21.7■■□□□ 1.06
PSMD11-211ENST00000585265 KIF21AQ7Z4S6 1674 aa21.66■■□□□ 1.06
PSMD11-211ENST00000585265 THOC2Q8NI27 1593 aaKnown RBP21.62■■□□□ 1.05
PSMD11-211ENST00000585265 CADPSQ9ULU8 1353 aa21.61■■□□□ 1.05
PSMD11-211ENST00000585265 PDS5BQ9NTI5 1447 aa21.6■■□□□ 1.05
PSMD11-211ENST00000585265 TOP2AP11388 1531 aaKnown RBP21.55■■□□□ 1.04
PSMD11-211ENST00000585265 DNAJC5Q9H3Z4 198 aa21.51■■□□□ 1.03
PSMD11-211ENST00000585265 CFTRP13569 1480 aa21.42■■□□□ 1.02
PSMD11-211ENST00000585265 MRC2Q9UBG0 1479 aa21.41■■□□□ 1.02
PSMD11-211ENST00000585265 FANCD2Q9BXW9 1451 aa21.38■■□□□ 1.01
PSMD11-211ENST00000585265 CEP164Q9UPV0 1460 aa21.38■■□□□ 1.01
PSMD11-211ENST00000585265 WDR62O43379 1518 aa21.36■■□□□ 1.01
PSMD11-211ENST00000585265 CCDC88BA6NC98 1476 aa21.32■■□□□ 1
PSMD11-211ENST00000585265 SUPT5HO00267 1087 aaKnown RBP21.31■■□□□ 1
PSMD11-211ENST00000585265 PRDM2Q13029 1718 aa21.29■■□□□ 1
PSMD11-211ENST00000585265 URB2Q14146 1524 aaKnown RBP21.2■□□□□ 0.98
PSMD11-211ENST00000585265 TOPBP1Q92547 1522 aa21.01■□□□□ 0.95
PSMD11-211ENST00000585265 ABCC8Q09428 1581 aa20.95■□□□□ 0.94
PSMD11-211ENST00000585265 DNMBPQ6XZF7 1577 aa20.95■□□□□ 0.94
PSMD11-211ENST00000585265 IFT140Q96RY7 1462 aa20.93■□□□□ 0.94
PSMD11-211ENST00000585265 ZNF608Q9ULD9 1512 aaPredicted RBP20.91■□□□□ 0.94
PSMD11-211ENST00000585265 TARBP1Q13395 1621 aaKnown RBP20.82■□□□□ 0.92
PSMD11-211ENST00000585265 OSCARQ8IYS5 282 aa20.82■□□□□ 0.92
PSMD11-211ENST00000585265 POLA1P09884 1462 aaPredicted RBP20.81■□□□□ 0.92
PSMD11-211ENST00000585265 EIF4G3O43432 1585 aaKnown RBP20.8■□□□□ 0.92
PSMD11-211ENST00000585265 AQRO60306 1485 aaKnown RBP eCLIP20.75■□□□□ 0.912e-6■□□□□ 8.5
PSMD11-211ENST00000585265 RAD54L2Q9Y4B4 1467 aa20.75■□□□□ 0.91
PSMD11-211ENST00000585265 CUX1P39880 1505 aa20.73■□□□□ 0.91
PSMD11-211ENST00000585265 SOGA1O94964 1423 aa20.71■□□□□ 0.91
PSMD11-211ENST00000585265 FGD5Q6ZNL6 1462 aa20.71■□□□□ 0.91
PSMD11-211ENST00000585265 TRIM41Q8WV44 630 aa20.69■□□□□ 0.9
PSMD11-211ENST00000585265 TDRD9Q8NDG6 1382 aaKnown RBP20.65■□□□□ 0.9
PSMD11-211ENST00000585265 CHD1O14646 1710 aa20.64■□□□□ 0.9
PSMD11-211ENST00000585265 WDR97A6NE52 1622 aa20.58■□□□□ 0.89
PSMD11-211ENST00000585265 RIMBP3CA6NJZ7 1639 aa20.56■□□□□ 0.88
PSMD11-211ENST00000585265 RIMBP3BA6NNM3 1639 aa20.56■□□□□ 0.88
PSMD11-211ENST00000585265 RIMBP3Q9UFD9 1639 aa20.56■□□□□ 0.88
PSMD11-211ENST00000585265 FBLN2P98095 1184 aa20.56■□□□□ 0.88
PSMD11-211ENST00000585265 SNAPC4Q5SXM2 1469 aa20.53■□□□□ 0.88
PSMD11-211ENST00000585265 GRIN2BQ13224 1484 aa20.5■□□□□ 0.87
PSMD11-211ENST00000585265 ARHGEF11O15085 1522 aa20.49■□□□□ 0.87
PSMD11-211ENST00000585265 PBRM1Q86U86 1689 aa20.48■□□□□ 0.87
PSMD11-211ENST00000585265 BIVM-ERCC5R4GMW8 1640 aa20.48■□□□□ 0.87
PSMD11-211ENST00000585265 ABCA10Q8WWZ4 1543 aa20.48■□□□□ 0.87
PSMD11-211ENST00000585265 SYNJ1O43426 1573 aa20.46■□□□□ 0.87
PSMD11-211ENST00000585265 TOP2BQ02880 1626 aa20.46■□□□□ 0.87
PSMD11-211ENST00000585265 GAPVD1Q14C86 1478 aa20.46■□□□□ 0.87
PSMD11-211ENST00000585265 MAGI1Q96QZ7 1491 aaPredicted RBP20.46■□□□□ 0.87
PSMD11-211ENST00000585265 WRNQ14191 1432 aaPredicted RBP eCLIP20.45■□□□□ 0.86
PSMD11-211ENST00000585265 ABCA5Q8WWZ7 1642 aa20.45■□□□□ 0.86
PSMD11-211ENST00000585265 CHMP7Q8WUX9 453 aaPredicted RBP20.43■□□□□ 0.86
PSMD11-211ENST00000585265 SYNJ2O15056 1496 aa20.4■□□□□ 0.86
PSMD11-211ENST00000585265 CLASP1Q7Z460 1538 aa20.37■□□□□ 0.85
PSMD11-211ENST00000585265 CYB5RLQ6IPT4 315 aa20.34■□□□□ 0.85
PSMD11-211ENST00000585265 ARAP1Q96P48 1450 aa20.31■□□□□ 0.84
PSMD11-211ENST00000585265 CHIC1Q5VXU3 224 aa20.31■□□□□ 0.84
PSMD11-211ENST00000585265 ADAMTS12P58397 1594 aa20.26■□□□□ 0.83
PSMD11-211ENST00000585265 GRIN2AQ12879 1464 aa20.24■□□□□ 0.83
PSMD11-211ENST00000585265 ERICH3Q5RHP9 1530 aa20.22■□□□□ 0.83
PSMD11-211ENST00000585265 FHAD1B1AJZ9 1412 aa20.19■□□□□ 0.82
PSMD11-211ENST00000585265 CEP170Q5SW79 1584 aa20.18■□□□□ 0.82
PSMD11-211ENST00000585265 NUP160Q12769 1436 aa20.16■□□□□ 0.82
PSMD11-211ENST00000585265 ERCC6L2Q5T890 1561 aa20.1■□□□□ 0.81
PSMD11-211ENST00000585265 SHROOM2Q13796 1616 aa20.07■□□□□ 0.8
PSMD11-211ENST00000585265 KIF27Q86VH2 1401 aa20.04■□□□□ 0.8
PSMD11-211ENST00000585265 TRHP20396 242 aaPredicted RBP20.03■□□□□ 0.8
PSMD11-211ENST00000585265 IGF1RP08069 1367 aa20.03■□□□□ 0.8
PSMD11-211ENST00000585265 CUL7Q14999 1698 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms