RNA–Protein interactions for RNA: ENST00000584923.1

SNORD3A-201, Transcript of small nucleolar RNA, C/D box 3A, humanhuman

BASIC

Gene SNORD3A, Length 699 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3A-201ENST00000584923 NISCHQ9Y2I1 1504 aa25.22■■□□□ 1.63
SNORD3A-201ENST00000584923 CCDC180Q9P1Z9 1646 aa22.41■■□□□ 1.18
SNORD3A-201ENST00000584923 ABCC9O60706 1549 aa22.11■■□□□ 1.13
SNORD3A-201ENST00000584923 RB1CC1Q8TDY2 1594 aa21.14■□□□□ 0.98
SNORD3A-201ENST00000584923 NACADO15069 1562 aa21.07■□□□□ 0.96
SNORD3A-201ENST00000584923 DCAF8L2P0C7V8 631 aa21.04■□□□□ 0.96
SNORD3A-201ENST00000584923 ZCCHC6Q5VYS8 1495 aaKnown RBP21.01■□□□□ 0.95
SNORD3A-201ENST00000584923 MYO15BQ96JP2 1530 aa20.99■□□□□ 0.95
SNORD3A-201ENST00000584923 DCAF1Q9Y4B6 1507 aa20.9■□□□□ 0.94
SNORD3A-201ENST00000584923 UNC13AQ9UPW8 1703 aa20.84■□□□□ 0.93
SNORD3A-201ENST00000584923 PABPN1Q86U42 306 aaKnown RBP eCLIP20.61■□□□□ 0.89
SNORD3A-201ENST00000584923 BICRAQ9NZM4 1560 aa20.59■□□□□ 0.89
SNORD3A-201ENST00000584923 DNAJC5BQ9UF47 199 aa20.52■□□□□ 0.88
SNORD3A-201ENST00000584923 SCRIBQ14160 1630 aa20.45■□□□□ 0.86
SNORD3A-201ENST00000584923 SHROOM4Q9ULL8 1493 aa20.24■□□□□ 0.83
SNORD3A-201ENST00000584923 EIF4G1Q04637 1599 aaKnown RBP20.02■□□□□ 0.8
SNORD3A-201ENST00000584923 CC2D2AQ9P2K1 1620 aa20.02■□□□□ 0.79
SNORD3A-201ENST00000584923 CECR2Q9BXF3 1484 aa19.86■□□□□ 0.77
SNORD3A-201ENST00000584923 BAZ1AQ9NRL2 1556 aaPredicted RBP19.54■□□□□ 0.72
SNORD3A-201ENST00000584923 SMARCA4P51532 1647 aa19.54■□□□□ 0.72
SNORD3A-201ENST00000584923 NCAPD3P42695 1498 aa19.46■□□□□ 0.71
SNORD3A-201ENST00000584923 ATAD2BQ9ULI0 1458 aa19.45■□□□□ 0.7
SNORD3A-201ENST00000584923 SMARCA2P51531 1590 aa19.42■□□□□ 0.7
SNORD3A-201ENST00000584923 MROH2BQ7Z745 1585 aa19.41■□□□□ 0.7
SNORD3A-201ENST00000584923 PEG3Q9GZU2 1588 aa19.39■□□□□ 0.69
SNORD3A-201ENST00000584923 HMGXB3Q12766 1538 aa19.33■□□□□ 0.68
SNORD3A-201ENST00000584923 BAZ1BQ9UIG0 1483 aaKnown RBP19.27■□□□□ 0.67
SNORD3A-201ENST00000584923 RSF1Q96T23 1441 aaPredicted RBP19.24■□□□□ 0.67
SNORD3A-201ENST00000584923 WIZO95785 1651 aa19.19■□□□□ 0.66
SNORD3A-201ENST00000584923 AEBP2Q6ZN18 517 aaPredicted RBP19.14■□□□□ 0.65
SNORD3A-201ENST00000584923 NESP48681 1621 aa19.11■□□□□ 0.65
SNORD3A-201ENST00000584923 ERCC6Q03468 1493 aa19.02■□□□□ 0.63
SNORD3A-201ENST00000584923 TOP2AP11388 1531 aaKnown RBP19.01■□□□□ 0.63
SNORD3A-201ENST00000584923 LAMC3Q9Y6N6 1575 aa18.97■□□□□ 0.63
SNORD3A-201ENST00000584923 KIF21AQ7Z4S6 1674 aa18.92■□□□□ 0.62
SNORD3A-201ENST00000584923 CUX2O14529 1486 aa18.89■□□□□ 0.61
SNORD3A-201ENST00000584923 CADPSQ9ULU8 1353 aa18.88■□□□□ 0.61
SNORD3A-201ENST00000584923 THOC2Q8NI27 1593 aaKnown RBP18.86■□□□□ 0.61
SNORD3A-201ENST00000584923 CCDC88BA6NC98 1476 aa18.8■□□□□ 0.6
SNORD3A-201ENST00000584923 PDS5BQ9NTI5 1447 aa18.8■□□□□ 0.6
SNORD3A-201ENST00000584923 CFTRP13569 1480 aa18.77■□□□□ 0.59
SNORD3A-201ENST00000584923 SUPT5HO00267 1087 aaKnown RBP18.75■□□□□ 0.59
SNORD3A-201ENST00000584923 PRDM2Q13029 1718 aa18.67■□□□□ 0.58
SNORD3A-201ENST00000584923 MRC2Q9UBG0 1479 aa18.66■□□□□ 0.58
SNORD3A-201ENST00000584923 FANCD2Q9BXW9 1451 aa18.65■□□□□ 0.58
SNORD3A-201ENST00000584923 WDR62O43379 1518 aa18.64■□□□□ 0.57
SNORD3A-201ENST00000584923 CEP164Q9UPV0 1460 aa18.63■□□□□ 0.57
SNORD3A-201ENST00000584923 CHIC1Q5VXU3 224 aa18.61■□□□□ 0.57
SNORD3A-201ENST00000584923 DNAJC5Q9H3Z4 198 aa18.57■□□□□ 0.56
SNORD3A-201ENST00000584923 URB2Q14146 1524 aaKnown RBP18.52■□□□□ 0.56
SNORD3A-201ENST00000584923 ABCC8Q09428 1581 aa18.4■□□□□ 0.54
SNORD3A-201ENST00000584923 TOPBP1Q92547 1522 aa18.35■□□□□ 0.53
SNORD3A-201ENST00000584923 DNMBPQ6XZF7 1577 aa18.32■□□□□ 0.52
SNORD3A-201ENST00000584923 ZNF608Q9ULD9 1512 aaPredicted RBP18.25■□□□□ 0.51
SNORD3A-201ENST00000584923 IFT140Q96RY7 1462 aa18.24■□□□□ 0.51
SNORD3A-201ENST00000584923 TARBP1Q13395 1621 aaKnown RBP18.2■□□□□ 0.5
SNORD3A-201ENST00000584923 CUX1P39880 1505 aa18.2■□□□□ 0.5
SNORD3A-201ENST00000584923 POLA1P09884 1462 aaPredicted RBP18.18■□□□□ 0.5
SNORD3A-201ENST00000584923 EIF4G3O43432 1585 aaKnown RBP18.17■□□□□ 0.5
SNORD3A-201ENST00000584923 FGD5Q6ZNL6 1462 aa18.14■□□□□ 0.5
SNORD3A-201ENST00000584923 SOGA1O94964 1423 aa18.14■□□□□ 0.49
SNORD3A-201ENST00000584923 WRNQ14191 1432 aaPredicted RBP eCLIP18.13■□□□□ 0.49
SNORD3A-201ENST00000584923 RAD54L2Q9Y4B4 1467 aa18.13■□□□□ 0.49
SNORD3A-201ENST00000584923 AQRO60306 1485 aaKnown RBP eCLIP18.09■□□□□ 0.49
SNORD3A-201ENST00000584923 TOP2BQ02880 1626 aa18.07■□□□□ 0.48
SNORD3A-201ENST00000584923 BIVM-ERCC5R4GMW8 1640 aa18.07■□□□□ 0.48
SNORD3A-201ENST00000584923 SYNJ1O43426 1573 aa18.04■□□□□ 0.48
SNORD3A-201ENST00000584923 CHD1O14646 1710 aa18.04■□□□□ 0.48
SNORD3A-201ENST00000584923 OSCARQ8IYS5 282 aa18.04■□□□□ 0.48
SNORD3A-201ENST00000584923 WDR97A6NE52 1622 aa18.04■□□□□ 0.48
SNORD3A-201ENST00000584923 TDRD9Q8NDG6 1382 aaKnown RBP18.01■□□□□ 0.47
SNORD3A-201ENST00000584923 ABCA10Q8WWZ4 1543 aa17.99■□□□□ 0.47
SNORD3A-201ENST00000584923 PBRM1Q86U86 1689 aa17.93■□□□□ 0.46
SNORD3A-201ENST00000584923 SNAPC4Q5SXM2 1469 aa17.92■□□□□ 0.46
SNORD3A-201ENST00000584923 GRIN2BQ13224 1484 aa17.91■□□□□ 0.46
SNORD3A-201ENST00000584923 GAPVD1Q14C86 1478 aa17.91■□□□□ 0.46
SNORD3A-201ENST00000584923 ABCA5Q8WWZ7 1642 aa17.9■□□□□ 0.46
SNORD3A-201ENST00000584923 RIMBP3CA6NJZ7 1639 aa17.89■□□□□ 0.45
SNORD3A-201ENST00000584923 RIMBP3BA6NNM3 1639 aa17.89■□□□□ 0.45
SNORD3A-201ENST00000584923 RIMBP3Q9UFD9 1639 aa17.89■□□□□ 0.45
SNORD3A-201ENST00000584923 TRIM41Q8WV44 630 aa17.87■□□□□ 0.45
SNORD3A-201ENST00000584923 FBLN2P98095 1184 aa17.86■□□□□ 0.45
SNORD3A-201ENST00000584923 MAGI1Q96QZ7 1491 aaPredicted RBP17.86■□□□□ 0.45
SNORD3A-201ENST00000584923 ARHGEF11O15085 1522 aa17.82■□□□□ 0.44
SNORD3A-201ENST00000584923 CHMP7Q8WUX9 453 aaPredicted RBP17.79■□□□□ 0.44
SNORD3A-201ENST00000584923 SYNJ2O15056 1496 aa17.79■□□□□ 0.44
SNORD3A-201ENST00000584923 ERICH3Q5RHP9 1530 aa17.78■□□□□ 0.44
SNORD3A-201ENST00000584923 CLASP1Q7Z460 1538 aa17.77■□□□□ 0.44
SNORD3A-201ENST00000584923 KIF27Q86VH2 1401 aa17.76■□□□□ 0.43
SNORD3A-201ENST00000584923 ADAMTS12P58397 1594 aa17.74■□□□□ 0.43
SNORD3A-201ENST00000584923 FHAD1B1AJZ9 1412 aa17.72■□□□□ 0.43
SNORD3A-201ENST00000584923 IGF1RP08069 1367 aa17.7■□□□□ 0.42
SNORD3A-201ENST00000584923 ARAP1Q96P48 1450 aa17.69■□□□□ 0.42
SNORD3A-201ENST00000584923 GRIN2AQ12879 1464 aa17.67■□□□□ 0.42
SNORD3A-201ENST00000584923 CYB5RLQ6IPT4 315 aa17.64■□□□□ 0.41
SNORD3A-201ENST00000584923 CEP170Q5SW79 1584 aa17.64■□□□□ 0.41
SNORD3A-201ENST00000584923 CUL7Q14999 1698 aa17.61■□□□□ 0.41
SNORD3A-201ENST00000584923 NUP160Q12769 1436 aa17.6■□□□□ 0.41
SNORD3A-201ENST00000584923 RUSC2Q8N2Y8 1516 aa17.58■□□□□ 0.41
SNORD3A-201ENST00000584923 CARMIL1Q5VZK9 1371 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms