RNA–Protein interactions for RNA: ENST00000584643.1

AC005838.2-201, humanhuman

BASIC

Gene AC005838.2, Length 317 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005838.2-201ENST00000584643 AEBP2Q6ZN18 517 aaPredicted RBP26.33■■□□□ 1.81
AC005838.2-201ENST00000584643 CHIC1Q5VXU3 224 aa24.75■■□□□ 1.55
AC005838.2-201ENST00000584643 NISCHQ9Y2I1 1504 aa22.51■■□□□ 1.19
AC005838.2-201ENST00000584643 SENP3Q9H4L4 574 aaPredicted RBP22.44■■□□□ 1.18
AC005838.2-201ENST00000584643 PHF23Q9BUL5 403 aaPredicted RBP22.15■■□□□ 1.14
AC005838.2-201ENST00000584643 FOXD1Q16676 465 aa20.99■□□□□ 0.95
AC005838.2-201ENST00000584643 PLPPR3Q6T4P5 718 aa20.43■□□□□ 0.86
AC005838.2-201ENST00000584643 ABCC9O60706 1549 aa20.12■□□□□ 0.81
AC005838.2-201ENST00000584643 CCDC180Q9P1Z9 1646 aa20.09■□□□□ 0.81
AC005838.2-201ENST00000584643 MSH5O43196 834 aa19.67■□□□□ 0.74
AC005838.2-201ENST00000584643 POTEDQ86YR6 584 aa19.63■□□□□ 0.73
AC005838.2-201ENST00000584643 PIAS4Q8N2W9 510 aaPredicted RBP19.52■□□□□ 0.72
AC005838.2-201ENST00000584643 PPP6R1Q9UPN7 881 aa19.48■□□□□ 0.71
AC005838.2-201ENST00000584643 ADRA2BP18089 450 aa19.38■□□□□ 0.69
AC005838.2-201ENST00000584643 EHMT2Q96KQ7 1210 aa19.22■□□□□ 0.67
AC005838.2-201ENST00000584643 RB1CC1Q8TDY2 1594 aa19.1■□□□□ 0.65
AC005838.2-201ENST00000584643 DCAF8L2P0C7V8 631 aa19.09■□□□□ 0.65
AC005838.2-201ENST00000584643 KCNA4P22459 653 aa19.02■□□□□ 0.64
AC005838.2-201ENST00000584643 NACADO15069 1562 aa18.98■□□□□ 0.63
AC005838.2-201ENST00000584643 PABPN1Q86U42 306 aaKnown RBP eCLIP18.78■□□□□ 0.6
AC005838.2-201ENST00000584643 DNAJC5BQ9UF47 199 aa18.77■□□□□ 0.6
AC005838.2-201ENST00000584643 UNC13AQ9UPW8 1703 aa18.7■□□□□ 0.58
AC005838.2-201ENST00000584643 MYO15BQ96JP2 1530 aa18.69■□□□□ 0.58
AC005838.2-201ENST00000584643 ZCCHC6Q5VYS8 1495 aaKnown RBP18.68■□□□□ 0.58
AC005838.2-201ENST00000584643 BICRAQ9NZM4 1560 aa18.57■□□□□ 0.56
AC005838.2-201ENST00000584643 DCAF1Q9Y4B6 1507 aa18.52■□□□□ 0.56
AC005838.2-201ENST00000584643 SCRIBQ14160 1630 aa18.45■□□□□ 0.54
AC005838.2-201ENST00000584643 SLC4A1APQ9BWU0 796 aaKnown RBP18.38■□□□□ 0.53
AC005838.2-201ENST00000584643 CSRNP3Q8WYN3 585 aa18.37■□□□□ 0.53
AC005838.2-201ENST00000584643 SHROOM4Q9ULL8 1493 aa18.22■□□□□ 0.51
AC005838.2-201ENST00000584643 CC2D2AQ9P2K1 1620 aa18.13■□□□□ 0.49
AC005838.2-201ENST00000584643 PPP4R3CPQ6ZMV5 832 aa18.12■□□□□ 0.49
AC005838.2-201ENST00000584643 EIF4G1Q04637 1599 aaKnown RBP18.1■□□□□ 0.49
AC005838.2-201ENST00000584643 NCBP3Q53F19 620 aaKnown RBP18.07■□□□□ 0.48
AC005838.2-201ENST00000584643 CECR2Q9BXF3 1484 aa18.07■□□□□ 0.48
AC005838.2-201ENST00000584643 MAPK8IP2Q13387 824 aaPredicted RBP17.87■□□□□ 0.45
AC005838.2-201ENST00000584643 DMRT2Q9Y5R5 561 aa17.78■□□□□ 0.44
AC005838.2-201ENST00000584643 NPM3O75607 178 aaKnown RBP17.71■□□□□ 0.43
AC005838.2-201ENST00000584643 SCAF1Q9H7N4 1312 aaKnown RBP17.68■□□□□ 0.42
AC005838.2-201ENST00000584643 SMARCA4P51532 1647 aa17.54■□□□□ 0.4
AC005838.2-201ENST00000584643 ATAD2BQ9ULI0 1458 aa17.53■□□□□ 0.4
AC005838.2-201ENST00000584643 NCAPD3P42695 1498 aa17.52■□□□□ 0.4
AC005838.2-201ENST00000584643 SLC24A1O60721 1099 aa17.51■□□□□ 0.39
AC005838.2-201ENST00000584643 ZBTB22O15209 634 aa17.47■□□□□ 0.39
AC005838.2-201ENST00000584643 SMARCA2P51531 1590 aa17.46■□□□□ 0.39
AC005838.2-201ENST00000584643 BAZ1AQ9NRL2 1556 aaPredicted RBP17.45■□□□□ 0.38
AC005838.2-201ENST00000584643 HMGXB3Q12766 1538 aa17.41■□□□□ 0.38
AC005838.2-201ENST00000584643 MROH2BQ7Z745 1585 aa17.4■□□□□ 0.38
AC005838.2-201ENST00000584643 BAZ1BQ9UIG0 1483 aaKnown RBP17.38■□□□□ 0.37
AC005838.2-201ENST00000584643 CNKSR2Q8WXI2 1034 aa17.38■□□□□ 0.37
AC005838.2-201ENST00000584643 ERCC6Q03468 1493 aa17.34■□□□□ 0.37
AC005838.2-201ENST00000584643 NESP48681 1621 aa17.32■□□□□ 0.36
AC005838.2-201ENST00000584643 PEG3Q9GZU2 1588 aa17.31■□□□□ 0.36
AC005838.2-201ENST00000584643 AMER1Q5JTC6 1135 aaPredicted RBP17.26■□□□□ 0.35
AC005838.2-201ENST00000584643 FOXD4L1Q9NU39 408 aa17.21■□□□□ 0.35
AC005838.2-201ENST00000584643 WIZO95785 1651 aa17.2■□□□□ 0.34
AC005838.2-201ENST00000584643 CUX2O14529 1486 aa17.18■□□□□ 0.34
AC005838.2-201ENST00000584643 RTN4Q9NQC3 1192 aaKnown RBP17.17■□□□□ 0.34
AC005838.2-201ENST00000584643 LAMC3Q9Y6N6 1575 aa17.11■□□□□ 0.33
AC005838.2-201ENST00000584643 DNAJC5Q9H3Z4 198 aa17.08■□□□□ 0.32
AC005838.2-201ENST00000584643 KIF21AQ7Z4S6 1674 aa17.07■□□□□ 0.32
AC005838.2-201ENST00000584643 THOC2Q8NI27 1593 aaKnown RBP17.06■□□□□ 0.32
AC005838.2-201ENST00000584643 RSF1Q96T23 1441 aaPredicted RBP17.05■□□□□ 0.32
AC005838.2-201ENST00000584643 HOXD11P31277 338 aaPredicted RBP17.05■□□□□ 0.32
AC005838.2-201ENST00000584643 PDS5BQ9NTI5 1447 aa17.03■□□□□ 0.32
AC005838.2-201ENST00000584643 CADPSQ9ULU8 1353 aa17.02■□□□□ 0.32
AC005838.2-201ENST00000584643 CACNB1Q02641 598 aaPredicted RBP17.02■□□□□ 0.32
AC005838.2-201ENST00000584643 DCAF8L1A6NGE4 600 aa17.01■□□□□ 0.31
AC005838.2-201ENST00000584643 TOP2AP11388 1531 aaKnown RBP16.94■□□□□ 0.3
AC005838.2-201ENST00000584643 MRC2Q9UBG0 1479 aa16.9■□□□□ 0.3
AC005838.2-201ENST00000584643 FANCD2Q9BXW9 1451 aa16.86■□□□□ 0.29
AC005838.2-201ENST00000584643 CEP164Q9UPV0 1460 aa16.86■□□□□ 0.29
AC005838.2-201ENST00000584643 RNF216Q9NWF9 866 aaPredicted RBP16.85■□□□□ 0.29
AC005838.2-201ENST00000584643 CFTRP13569 1480 aa16.85■□□□□ 0.29
AC005838.2-201ENST00000584643 WDR62O43379 1518 aa16.83■□□□□ 0.28
AC005838.2-201ENST00000584643 RNF39Q9H2S5 420 aa16.8■□□□□ 0.28
AC005838.2-201ENST00000584643 CCDC88BA6NC98 1476 aa16.78■□□□□ 0.28
AC005838.2-201ENST00000584643 URB2Q14146 1524 aaKnown RBP16.73■□□□□ 0.27
AC005838.2-201ENST00000584643 PRDM2Q13029 1718 aa16.67■□□□□ 0.26
AC005838.2-201ENST00000584643 FKBP8Q14318 412 aa16.6■□□□□ 0.25
AC005838.2-201ENST00000584643 TOPBP1Q92547 1522 aa16.55■□□□□ 0.24
AC005838.2-201ENST00000584643 ZNF608Q9ULD9 1512 aaPredicted RBP16.53■□□□□ 0.24
AC005838.2-201ENST00000584643 C1QBPQ07021 282 aaKnown RBP16.52■□□□□ 0.24
AC005838.2-201ENST00000584643 ATXN8OSP0DMR3 200 aa16.51■□□□□ 0.23
AC005838.2-201ENST00000584643 IFT140Q96RY7 1462 aa16.5■□□□□ 0.23
AC005838.2-201ENST00000584643 SUPT5HO00267 1087 aaKnown RBP16.5■□□□□ 0.23
AC005838.2-201ENST00000584643 TRIM41Q8WV44 630 aa16.5■□□□□ 0.23
AC005838.2-201ENST00000584643 DNMBPQ6XZF7 1577 aa16.49■□□□□ 0.23
AC005838.2-201ENST00000584643 OSCARQ8IYS5 282 aa16.46■□□□□ 0.23
AC005838.2-201ENST00000584643 ABCC8Q09428 1581 aa16.45■□□□□ 0.22
AC005838.2-201ENST00000584643 EIF4G3O43432 1585 aaKnown RBP16.41■□□□□ 0.22
AC005838.2-201ENST00000584643 MYCNP04198 464 aaPredicted RBP16.4■□□□□ 0.22
AC005838.2-201ENST00000584643 POLA1P09884 1462 aaPredicted RBP16.4■□□□□ 0.22
AC005838.2-201ENST00000584643 SLC4A2P04920 1241 aa16.39■□□□□ 0.21
AC005838.2-201ENST00000584643 AQRO60306 1485 aaKnown RBP eCLIP16.39■□□□□ 0.21
AC005838.2-201ENST00000584643 TARBP1Q13395 1621 aaKnown RBP16.38■□□□□ 0.21
AC005838.2-201ENST00000584643 RAD54L2Q9Y4B4 1467 aa16.37■□□□□ 0.21
AC005838.2-201ENST00000584643 CUX1P39880 1505 aa16.34■□□□□ 0.21
AC005838.2-201ENST00000584643 SOGA1O94964 1423 aa16.33■□□□□ 0.2
AC005838.2-201ENST00000584643 FGD5Q6ZNL6 1462 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms