RNA–Protein interactions for RNA: ENST00000584620.5

PGAP3-209, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 3

Gene PGAP3, Length 804 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-209ENST00000584620 NISCHQ9Y2I1 1504 aa27.16■■□□□ 1.94
PGAP3-209ENST00000584620 ABCC9O60706 1549 aa25.15■■□□□ 1.62
PGAP3-209ENST00000584620 CCDC180Q9P1Z9 1646 aa24.32■■□□□ 1.48
PGAP3-209ENST00000584620 DNAJC5BQ9UF47 199 aa24.28■■□□□ 1.48
PGAP3-209ENST00000584620 RB1CC1Q8TDY2 1594 aa23.52■■□□□ 1.36
PGAP3-209ENST00000584620 PABPN1Q86U42 306 aaKnown RBP eCLIP23.38■■□□□ 1.33
PGAP3-209ENST00000584620 NACADO15069 1562 aa23.18■■□□□ 1.3
PGAP3-209ENST00000584620 DCAF8L2P0C7V8 631 aa23.15■■□□□ 1.3
PGAP3-209ENST00000584620 UNC13AQ9UPW8 1703 aa23.04■■□□□ 1.28
PGAP3-209ENST00000584620 BICRAQ9NZM4 1560 aa22.91■■□□□ 1.26
PGAP3-209ENST00000584620 DNAJC5Q9H3Z4 198 aa22.73■■□□□ 1.23
PGAP3-209ENST00000584620 MYO15BQ96JP2 1530 aa22.72■■□□□ 1.23
PGAP3-209ENST00000584620 CECR2Q9BXF3 1484 aa22.69■■□□□ 1.22
PGAP3-209ENST00000584620 CC2D2AQ9P2K1 1620 aa22.64■■□□□ 1.21
PGAP3-209ENST00000584620 ZCCHC6Q5VYS8 1495 aaKnown RBP22.52■■□□□ 1.2
PGAP3-209ENST00000584620 DCAF1Q9Y4B6 1507 aa22.42■■□□□ 1.18
PGAP3-209ENST00000584620 EIF4G1Q04637 1599 aaKnown RBP22.39■■□□□ 1.18
PGAP3-209ENST00000584620 SHROOM4Q9ULL8 1493 aa22.38■■□□□ 1.17
PGAP3-209ENST00000584620 SCRIBQ14160 1630 aa22.23■■□□□ 1.15
PGAP3-209ENST00000584620 CUX2O14529 1486 aa21.85■■□□□ 1.09
PGAP3-209ENST00000584620 ERCC6Q03468 1493 aa21.73■■□□□ 1.07
PGAP3-209ENST00000584620 TRIM41Q8WV44 630 aa21.54■■□□□ 1.04
PGAP3-209ENST00000584620 NCAPD3P42695 1498 aa21.44■■□□□ 1.02
PGAP3-209ENST00000584620 NESP48681 1621 aa21.42■■□□□ 1.02
PGAP3-209ENST00000584620 ATAD2BQ9ULI0 1458 aa21.3■■□□□ 1
PGAP3-209ENST00000584620 THOC2Q8NI27 1593 aaKnown RBP21.25■□□□□ 0.99
PGAP3-209ENST00000584620 HMGXB3Q12766 1538 aa21.17■□□□□ 0.98
PGAP3-209ENST00000584620 SMARCA2P51531 1590 aa21.15■□□□□ 0.98
PGAP3-209ENST00000584620 SMARCA4P51532 1647 aa21.14■□□□□ 0.97
PGAP3-209ENST00000584620 KIF21AQ7Z4S6 1674 aa21.07■□□□□ 0.96
PGAP3-209ENST00000584620 BAZ1BQ9UIG0 1483 aaKnown RBP21.06■□□□□ 0.96
PGAP3-209ENST00000584620 BAZ1AQ9NRL2 1556 aaPredicted RBP21.04■□□□□ 0.96
PGAP3-209ENST00000584620 LAMC3Q9Y6N6 1575 aa21.04■□□□□ 0.96
PGAP3-209ENST00000584620 PDS5BQ9NTI5 1447 aa20.97■□□□□ 0.95
PGAP3-209ENST00000584620 PEG3Q9GZU2 1588 aa20.96■□□□□ 0.95
PGAP3-209ENST00000584620 MROH2BQ7Z745 1585 aa20.95■□□□□ 0.94
PGAP3-209ENST00000584620 MRC2Q9UBG0 1479 aa20.85■□□□□ 0.93
PGAP3-209ENST00000584620 OSCARQ8IYS5 282 aa20.84■□□□□ 0.93
PGAP3-209ENST00000584620 WDR62O43379 1518 aa20.79■□□□□ 0.92
PGAP3-209ENST00000584620 CADPSQ9ULU8 1353 aa20.79■□□□□ 0.92
PGAP3-209ENST00000584620 WIZO95785 1651 aa20.64■□□□□ 0.89
PGAP3-209ENST00000584620 CEP164Q9UPV0 1460 aa20.62■□□□□ 0.89
PGAP3-209ENST00000584620 RIMBP3CA6NJZ7 1639 aa20.6■□□□□ 0.89
PGAP3-209ENST00000584620 RIMBP3BA6NNM3 1639 aa20.6■□□□□ 0.89
PGAP3-209ENST00000584620 RIMBP3Q9UFD9 1639 aa20.6■□□□□ 0.89
PGAP3-209ENST00000584620 FANCD2Q9BXW9 1451 aa20.56■□□□□ 0.88
PGAP3-209ENST00000584620 RSF1Q96T23 1441 aaPredicted RBP20.54■□□□□ 0.88
PGAP3-209ENST00000584620 ARHGEF11O15085 1522 aa20.47■□□□□ 0.87
PGAP3-209ENST00000584620 TRHP20396 242 aaPredicted RBP20.46■□□□□ 0.87
PGAP3-209ENST00000584620 CYB5RLQ6IPT4 315 aa20.45■□□□□ 0.86
PGAP3-209ENST00000584620 URB2Q14146 1524 aaKnown RBP20.44■□□□□ 0.86
PGAP3-209ENST00000584620 CFTRP13569 1480 aa20.41■□□□□ 0.86
PGAP3-209ENST00000584620 TOP2AP11388 1531 aaKnown RBP20.39■□□□□ 0.85
PGAP3-209ENST00000584620 AEBP2Q6ZN18 517 aaPredicted RBP20.35■□□□□ 0.85
PGAP3-209ENST00000584620 ZNF608Q9ULD9 1512 aaPredicted RBP20.33■□□□□ 0.85
PGAP3-209ENST00000584620 ARAP1Q96P48 1450 aa20.23■□□□□ 0.83
PGAP3-209ENST00000584620 IFT140Q96RY7 1462 aa20.22■□□□□ 0.83
PGAP3-209ENST00000584620 CCDC88BA6NC98 1476 aa20.2■□□□□ 0.82
PGAP3-209ENST00000584620 FBLN2P98095 1184 aa20.14■□□□□ 0.81
PGAP3-209ENST00000584620 CHD1O14646 1710 aa20.13■□□□□ 0.81
PGAP3-209ENST00000584620 EIF4G3O43432 1585 aaKnown RBP20.12■□□□□ 0.81
PGAP3-209ENST00000584620 TOPBP1Q92547 1522 aa20.08■□□□□ 0.81
PGAP3-209ENST00000584620 AQRO60306 1485 aaKnown RBP eCLIP20.08■□□□□ 0.81
PGAP3-209ENST00000584620 PRDM2Q13029 1718 aa20.07■□□□□ 0.8
PGAP3-209ENST00000584620 TARBP1Q13395 1621 aaKnown RBP19.94■□□□□ 0.78
PGAP3-209ENST00000584620 ABCC8Q09428 1581 aa19.93■□□□□ 0.78
PGAP3-209ENST00000584620 DNMBPQ6XZF7 1577 aa19.91■□□□□ 0.78
PGAP3-209ENST00000584620 TDRD9Q8NDG6 1382 aaKnown RBP19.85■□□□□ 0.77
PGAP3-209ENST00000584620 CLASP1Q7Z460 1538 aa19.85■□□□□ 0.77
PGAP3-209ENST00000584620 POLA1P09884 1462 aaPredicted RBP19.84■□□□□ 0.77
PGAP3-209ENST00000584620 RAD54L2Q9Y4B4 1467 aa19.84■□□□□ 0.77
PGAP3-209ENST00000584620 CHMP7Q8WUX9 453 aaPredicted RBP19.82■□□□□ 0.76
PGAP3-209ENST00000584620 SNAPC4Q5SXM2 1469 aa19.8■□□□□ 0.76
PGAP3-209ENST00000584620 SYNJ1O43426 1573 aa19.76■□□□□ 0.75
PGAP3-209ENST00000584620 SOGA1O94964 1423 aa19.76■□□□□ 0.75
PGAP3-209ENST00000584620 GAPVD1Q14C86 1478 aa19.73■□□□□ 0.75
PGAP3-209ENST00000584620 CUX1P39880 1505 aa19.67■□□□□ 0.74
PGAP3-209ENST00000584620 FGD5Q6ZNL6 1462 aa19.67■□□□□ 0.74
PGAP3-209ENST00000584620 MAGI1Q96QZ7 1491 aaPredicted RBP19.67■□□□□ 0.74
PGAP3-209ENST00000584620 SYNJ2O15056 1496 aa19.64■□□□□ 0.73
PGAP3-209ENST00000584620 GRIN2BQ13224 1484 aa19.62■□□□□ 0.73
PGAP3-209ENST00000584620 SUPT5HO00267 1087 aaKnown RBP19.62■□□□□ 0.73
PGAP3-209ENST00000584620 WDR97A6NE52 1622 aa19.58■□□□□ 0.73
PGAP3-209ENST00000584620 ILDR1Q86SU0 546 aaPredicted RBP19.58■□□□□ 0.72
PGAP3-209ENST00000584620 ERCC6L2Q5T890 1561 aa19.57■□□□□ 0.72
PGAP3-209ENST00000584620 PBRM1Q86U86 1689 aa19.49■□□□□ 0.71
PGAP3-209ENST00000584620 KIF13AQ9H1H9 1805 aa19.48■□□□□ 0.71
PGAP3-209ENST00000584620 ABCA10Q8WWZ4 1543 aa19.46■□□□□ 0.71
PGAP3-209ENST00000584620 KDM4FA0A1W2PPD8 638 aa19.43■□□□□ 0.7
PGAP3-209ENST00000584620 CEP170Q5SW79 1584 aa19.42■□□□□ 0.7
PGAP3-209ENST00000584620 GRIN2AQ12879 1464 aa19.38■□□□□ 0.69
PGAP3-209ENST00000584620 ABCA5Q8WWZ7 1642 aa19.38■□□□□ 0.69
PGAP3-209ENST00000584620 WRNQ14191 1432 aaPredicted RBP eCLIP19.37■□□□□ 0.69
PGAP3-209ENST00000584620 FAM69CQ0P6D2 419 aa19.37■□□□□ 0.69
PGAP3-209ENST00000584620 NUP160Q12769 1436 aa19.33■□□□□ 0.68
PGAP3-209ENST00000584620 TOP2BQ02880 1626 aa19.31■□□□□ 0.68
PGAP3-209ENST00000584620 SHROOM2Q13796 1616 aa19.3■□□□□ 0.68
PGAP3-209ENST00000584620 BIVM-ERCC5R4GMW8 1640 aa19.29■□□□□ 0.68
PGAP3-209ENST00000584620 ABCC10Q5T3U5 1492 aa19.27■□□□□ 0.67
PGAP3-209ENST00000584620 ADAMTS12P58397 1594 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 161 ms