RNA–Protein interactions for RNA: ENST00000584171.1

TMEM104-206, Transcript of transmembrane protein 104, humanhuman

TSL 2

Gene TMEM104, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM104-206ENST00000584171 NISCHQ9Y2I1 1504 aa31.27■■■□□ 2.6
TMEM104-206ENST00000584171 ABCC9O60706 1549 aa28.95■■■□□ 2.23
TMEM104-206ENST00000584171 CCDC180Q9P1Z9 1646 aa28.27■■■□□ 2.12
TMEM104-206ENST00000584171 DNAJC5BQ9UF47 199 aa27.91■■■□□ 2.06
TMEM104-206ENST00000584171 RB1CC1Q8TDY2 1594 aa27.26■■□□□ 1.95
TMEM104-206ENST00000584171 NACADO15069 1562 aa26.96■■□□□ 1.91
TMEM104-206ENST00000584171 PABPN1Q86U42 306 aaKnown RBP eCLIP26.89■■□□□ 1.9
TMEM104-206ENST00000584171 DCAF8L2P0C7V8 631 aa26.58■■□□□ 1.85
TMEM104-206ENST00000584171 UNC13AQ9UPW8 1703 aa26.56■■□□□ 1.84
TMEM104-206ENST00000584171 BICRAQ9NZM4 1560 aa26.55■■□□□ 1.84
TMEM104-206ENST00000584171 MYO15BQ96JP2 1530 aa26.45■■□□□ 1.83
TMEM104-206ENST00000584171 CECR2Q9BXF3 1484 aa26.19■■□□□ 1.78
TMEM104-206ENST00000584171 SHROOM4Q9ULL8 1493 aa26.16■■□□□ 1.78
TMEM104-206ENST00000584171 DNAJC5Q9H3Z4 198 aa26.13■■□□□ 1.77
TMEM104-206ENST00000584171 CC2D2AQ9P2K1 1620 aa26.12■■□□□ 1.77
TMEM104-206ENST00000584171 EIF4G1Q04637 1599 aaKnown RBP25.92■■□□□ 1.74
TMEM104-206ENST00000584171 DCAF1Q9Y4B6 1507 aa25.83■■□□□ 1.73
TMEM104-206ENST00000584171 ZCCHC6Q5VYS8 1495 aaKnown RBP25.77■■□□□ 1.72
TMEM104-206ENST00000584171 SCRIBQ14160 1630 aa25.66■■□□□ 1.7
TMEM104-206ENST00000584171 CUX2O14529 1486 aa25.29■■□□□ 1.64
TMEM104-206ENST00000584171 ERCC6Q03468 1493 aa25.02■■□□□ 1.6
TMEM104-206ENST00000584171 NCAPD3P42695 1498 aa24.97■■□□□ 1.59
TMEM104-206ENST00000584171 ATAD2BQ9ULI0 1458 aa24.76■■□□□ 1.55
TMEM104-206ENST00000584171 NESP48681 1621 aa24.7■■□□□ 1.54
TMEM104-206ENST00000584171 HMGXB3Q12766 1538 aa24.65■■□□□ 1.54
TMEM104-206ENST00000584171 SMARCA2P51531 1590 aa24.59■■□□□ 1.53
TMEM104-206ENST00000584171 THOC2Q8NI27 1593 aaKnown RBP24.57■■□□□ 1.52
TMEM104-206ENST00000584171 TRIM41Q8WV44 630 aa24.54■■□□□ 1.52
TMEM104-206ENST00000584171 SMARCA4P51532 1647 aa24.48■■□□□ 1.51
TMEM104-206ENST00000584171 LAMC3Q9Y6N6 1575 aa24.42■■□□□ 1.5
TMEM104-206ENST00000584171 BAZ1BQ9UIG0 1483 aaKnown RBP24.41■■□□□ 1.5
TMEM104-206ENST00000584171 PEG3Q9GZU2 1588 aa24.33■■□□□ 1.49
TMEM104-206ENST00000584171 PDS5BQ9NTI5 1447 aa24.33■■□□□ 1.49
TMEM104-206ENST00000584171 BAZ1AQ9NRL2 1556 aaPredicted RBP24.28■■□□□ 1.48
TMEM104-206ENST00000584171 KIF21AQ7Z4S6 1674 aa24.27■■□□□ 1.48
TMEM104-206ENST00000584171 CADPSQ9ULU8 1353 aa24.16■■□□□ 1.46
TMEM104-206ENST00000584171 MRC2Q9UBG0 1479 aa24.14■■□□□ 1.46
TMEM104-206ENST00000584171 WDR62O43379 1518 aa24.11■■□□□ 1.45
TMEM104-206ENST00000584171 MROH2BQ7Z745 1585 aa24.07■■□□□ 1.44
TMEM104-206ENST00000584171 OSCARQ8IYS5 282 aa24.04■■□□□ 1.44
TMEM104-206ENST00000584171 CEP164Q9UPV0 1460 aa23.87■■□□□ 1.41
TMEM104-206ENST00000584171 FANCD2Q9BXW9 1451 aa23.82■■□□□ 1.4
TMEM104-206ENST00000584171 CFTRP13569 1480 aa23.74■■□□□ 1.39
TMEM104-206ENST00000584171 RIMBP3CA6NJZ7 1639 aa23.71■■□□□ 1.39
TMEM104-206ENST00000584171 RIMBP3BA6NNM3 1639 aa23.71■■□□□ 1.39
TMEM104-206ENST00000584171 RIMBP3Q9UFD9 1639 aa23.71■■□□□ 1.39
TMEM104-206ENST00000584171 URB2Q14146 1524 aaKnown RBP23.69■■□□□ 1.38
TMEM104-206ENST00000584171 WIZO95785 1651 aa23.67■■□□□ 1.38
TMEM104-206ENST00000584171 ARHGEF11O15085 1522 aa23.61■■□□□ 1.37
TMEM104-206ENST00000584171 ZNF608Q9ULD9 1512 aaPredicted RBP23.49■■□□□ 1.35
TMEM104-206ENST00000584171 CYB5RLQ6IPT4 315 aa23.49■■□□□ 1.35
TMEM104-206ENST00000584171 IFT140Q96RY7 1462 aa23.48■■□□□ 1.35
TMEM104-206ENST00000584171 TRHP20396 242 aaPredicted RBP23.38■■□□□ 1.33
TMEM104-206ENST00000584171 RSF1Q96T23 1441 aaPredicted RBP23.37■■□□□ 1.33
TMEM104-206ENST00000584171 TOP2AP11388 1531 aaKnown RBP23.37■■□□□ 1.33
TMEM104-206ENST00000584171 ARAP1Q96P48 1450 aa23.35■■□□□ 1.33
TMEM104-206ENST00000584171 TOPBP1Q92547 1522 aa23.29■■□□□ 1.32
TMEM104-206ENST00000584171 EIF4G3O43432 1585 aaKnown RBP23.26■■□□□ 1.31
TMEM104-206ENST00000584171 PRDM2Q13029 1718 aa23.24■■□□□ 1.31
TMEM104-206ENST00000584171 ABCC8Q09428 1581 aa23.22■■□□□ 1.31
TMEM104-206ENST00000584171 AQRO60306 1485 aaKnown RBP eCLIP23.21■■□□□ 1.31
TMEM104-206ENST00000584171 AEBP2Q6ZN18 517 aaPredicted RBP23.19■■□□□ 1.3
TMEM104-206ENST00000584171 CCDC88BA6NC98 1476 aa23.16■■□□□ 1.3
TMEM104-206ENST00000584171 CHD1O14646 1710 aa23.16■■□□□ 1.3
TMEM104-206ENST00000584171 TARBP1Q13395 1621 aaKnown RBP23.14■■□□□ 1.29
TMEM104-206ENST00000584171 FBLN2P98095 1184 aa23.12■■□□□ 1.29
TMEM104-206ENST00000584171 DNMBPQ6XZF7 1577 aa23.12■■□□□ 1.29
TMEM104-206ENST00000584171 POLA1P09884 1462 aaPredicted RBP23.03■■□□□ 1.28
TMEM104-206ENST00000584171 CLASP1Q7Z460 1538 aa23.01■■□□□ 1.27
TMEM104-206ENST00000584171 TDRD9Q8NDG6 1382 aaKnown RBP22.96■■□□□ 1.27
TMEM104-206ENST00000584171 RAD54L2Q9Y4B4 1467 aa22.94■■□□□ 1.26
TMEM104-206ENST00000584171 SOGA1O94964 1423 aa22.91■■□□□ 1.26
TMEM104-206ENST00000584171 SNAPC4Q5SXM2 1469 aa22.9■■□□□ 1.26
TMEM104-206ENST00000584171 CHMP7Q8WUX9 453 aaPredicted RBP22.89■■□□□ 1.25
TMEM104-206ENST00000584171 SYNJ1O43426 1573 aa22.86■■□□□ 1.25
TMEM104-206ENST00000584171 WDR97A6NE52 1622 aa22.85■■□□□ 1.25
TMEM104-206ENST00000584171 MAGI1Q96QZ7 1491 aaPredicted RBP22.85■■□□□ 1.25
TMEM104-206ENST00000584171 GAPVD1Q14C86 1478 aa22.8■■□□□ 1.24
TMEM104-206ENST00000584171 SYNJ2O15056 1496 aa22.79■■□□□ 1.24
TMEM104-206ENST00000584171 GRIN2BQ13224 1484 aa22.78■■□□□ 1.24
TMEM104-206ENST00000584171 FGD5Q6ZNL6 1462 aa22.75■■□□□ 1.23
TMEM104-206ENST00000584171 CUX1P39880 1505 aa22.64■■□□□ 1.21
TMEM104-206ENST00000584171 ERCC6L2Q5T890 1561 aa22.57■■□□□ 1.2
TMEM104-206ENST00000584171 PBRM1Q86U86 1689 aa22.51■■□□□ 1.19
TMEM104-206ENST00000584171 ABCA10Q8WWZ4 1543 aa22.51■■□□□ 1.19
TMEM104-206ENST00000584171 NUP160Q12769 1436 aa22.48■■□□□ 1.19
TMEM104-206ENST00000584171 GRIN2AQ12879 1464 aa22.48■■□□□ 1.19
TMEM104-206ENST00000584171 CEP170Q5SW79 1584 aa22.47■■□□□ 1.19
TMEM104-206ENST00000584171 ABCA5Q8WWZ7 1642 aa22.47■■□□□ 1.19
TMEM104-206ENST00000584171 KIF13AQ9H1H9 1805 aa22.41■■□□□ 1.18
TMEM104-206ENST00000584171 SHROOM2Q13796 1616 aa22.41■■□□□ 1.18
TMEM104-206ENST00000584171 KDM4FA0A1W2PPD8 638 aa22.35■■□□□ 1.17
TMEM104-206ENST00000584171 ILDR1Q86SU0 546 aaPredicted RBP22.34■■□□□ 1.17
TMEM104-206ENST00000584171 ADAMTS12P58397 1594 aa22.33■■□□□ 1.17
TMEM104-206ENST00000584171 ABCC10Q5T3U5 1492 aa22.33■■□□□ 1.16
TMEM104-206ENST00000584171 FHAD1B1AJZ9 1412 aa22.31■■□□□ 1.16
TMEM104-206ENST00000584171 FAM69CQ0P6D2 419 aa22.31■■□□□ 1.16
TMEM104-206ENST00000584171 PRG4Q92954 1404 aaPredicted RBP22.28■■□□□ 1.16
TMEM104-206ENST00000584171 WRNQ14191 1432 aaPredicted RBP eCLIP22.27■■□□□ 1.16
TMEM104-206ENST00000584171 JPH4Q96JJ6 628 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms