RNA–Protein interactions for RNA: ENST00000583850.5

ACADVL-236, Transcript of acyl-CoA dehydrogenase very long chain, humanhuman

TSL 2

Gene ACADVL, Length 903 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACADVL-236ENST00000583850 NISCHQ9Y2I1 1504 aa40.97■■■■■ 4.15
ACADVL-236ENST00000583850 CCDC180Q9P1Z9 1646 aa36.11■■■■□ 3.37
ACADVL-236ENST00000583850 ABCC9O60706 1549 aa35.84■■■■□ 3.33
ACADVL-236ENST00000583850 DNAJC5BQ9UF47 199 aa35.02■■■■□ 3.2
ACADVL-236ENST00000583850 ZCCHC6Q5VYS8 1495 aaKnown RBP34.34■■■■□ 3.09
ACADVL-236ENST00000583850 DCAF1Q9Y4B6 1507 aa33.94■■■■□ 3.02
ACADVL-236ENST00000583850 DCAF8L2P0C7V8 631 aa33.92■■■■□ 3.02
ACADVL-236ENST00000583850 MYO15BQ96JP2 1530 aa33.68■■■□□ 2.98
ACADVL-236ENST00000583850 NACADO15069 1562 aa33.63■■■□□ 2.97
ACADVL-236ENST00000583850 RB1CC1Q8TDY2 1594 aa33.47■■■□□ 2.95
ACADVL-236ENST00000583850 PABPN1Q86U42 306 aaKnown RBP eCLIP33.29■■■□□ 2.925e-9■■■■■ 35
ACADVL-236ENST00000583850 SHROOM4Q9ULL8 1493 aa33.08■■■□□ 2.89
ACADVL-236ENST00000583850 SCRIBQ14160 1630 aa33.02■■■□□ 2.88
ACADVL-236ENST00000583850 DNAJC5Q9H3Z4 198 aa32.98■■■□□ 2.87
ACADVL-236ENST00000583850 UNC13AQ9UPW8 1703 aa32.79■■■□□ 2.84
ACADVL-236ENST00000583850 BICRAQ9NZM4 1560 aa32.65■■■□□ 2.82
ACADVL-236ENST00000583850 CECR2Q9BXF3 1484 aa32.41■■■□□ 2.78
ACADVL-236ENST00000583850 CC2D2AQ9P2K1 1620 aa32.27■■■□□ 2.76
ACADVL-236ENST00000583850 EIF4G1Q04637 1599 aaKnown RBP31.89■■■□□ 2.7
ACADVL-236ENST00000583850 BAZ1AQ9NRL2 1556 aaPredicted RBP31.76■■■□□ 2.67
ACADVL-236ENST00000583850 SUPT5HO00267 1087 aaKnown RBP31.65■■■□□ 2.66
ACADVL-236ENST00000583850 SMARCA4P51532 1647 aa31.64■■■□□ 2.66
ACADVL-236ENST00000583850 MROH2BQ7Z745 1585 aa31.58■■■□□ 2.65
ACADVL-236ENST00000583850 RSF1Q96T23 1441 aaPredicted RBP31.56■■■□□ 2.64
ACADVL-236ENST00000583850 WIZO95785 1651 aa31.39■■■□□ 2.62
ACADVL-236ENST00000583850 CUX2O14529 1486 aa31.34■■■□□ 2.61
ACADVL-236ENST00000583850 PEG3Q9GZU2 1588 aa31.25■■■□□ 2.59
ACADVL-236ENST00000583850 SMARCA2P51531 1590 aa31.23■■■□□ 2.59
ACADVL-236ENST00000583850 ATAD2BQ9ULI0 1458 aa31.12■■■□□ 2.57
ACADVL-236ENST00000583850 TOP2AP11388 1531 aaKnown RBP31.09■■■□□ 2.57
ACADVL-236ENST00000583850 BAZ1BQ9UIG0 1483 aaKnown RBP31.01■■■□□ 2.56
ACADVL-236ENST00000583850 HMGXB3Q12766 1538 aa30.96■■■□□ 2.55
ACADVL-236ENST00000583850 ERCC6Q03468 1493 aa30.94■■■□□ 2.54
ACADVL-236ENST00000583850 TRIM41Q8WV44 630 aa30.92■■■□□ 2.54
ACADVL-236ENST00000583850 NCAPD3P42695 1498 aa30.92■■■□□ 2.54
ACADVL-236ENST00000583850 CCDC88BA6NC98 1476 aa30.66■■■□□ 2.5
ACADVL-236ENST00000583850 NESP48681 1621 aa30.47■■■□□ 2.47
ACADVL-236ENST00000583850 THOC2Q8NI27 1593 aaKnown RBP30.29■■■□□ 2.44
ACADVL-236ENST00000583850 PRDM2Q13029 1718 aa30.26■■■□□ 2.43
ACADVL-236ENST00000583850 CFTRP13569 1480 aa30.13■■■□□ 2.41
ACADVL-236ENST00000583850 CADPSQ9ULU8 1353 aa30.1■■■□□ 2.41
ACADVL-236ENST00000583850 LAMC3Q9Y6N6 1575 aa30.07■■■□□ 2.4
ACADVL-236ENST00000583850 CHIC1Q5VXU3 224 aa30.05■■■□□ 2.4
ACADVL-236ENST00000583850 ABCC8Q09428 1581 aa29.93■■■□□ 2.38
ACADVL-236ENST00000583850 KIF21AQ7Z4S6 1674 aa29.88■■■□□ 2.37
ACADVL-236ENST00000583850 PDS5BQ9NTI5 1447 aa29.84■■■□□ 2.37
ACADVL-236ENST00000583850 OSCARQ8IYS5 282 aa29.83■■■□□ 2.37
ACADVL-236ENST00000583850 FANCD2Q9BXW9 1451 aa29.81■■■□□ 2.36
ACADVL-236ENST00000583850 WRNQ14191 1432 aaPredicted RBP eCLIP29.8■■■□□ 2.36
ACADVL-236ENST00000583850 CEP164Q9UPV0 1460 aa29.72■■■□□ 2.35
ACADVL-236ENST00000583850 SYNJ1O43426 1573 aa29.69■■■□□ 2.34
ACADVL-236ENST00000583850 BIVM-ERCC5R4GMW8 1640 aa29.68■■■□□ 2.34
ACADVL-236ENST00000583850 TOP2BQ02880 1626 aa29.67■■■□□ 2.34
ACADVL-236ENST00000583850 MRC2Q9UBG0 1479 aa29.64■■■□□ 2.34
ACADVL-236ENST00000583850 WDR62O43379 1518 aa29.61■■■□□ 2.33
ACADVL-236ENST00000583850 CUX1P39880 1505 aa29.59■■■□□ 2.33
ACADVL-236ENST00000583850 DNMBPQ6XZF7 1577 aa29.55■■■□□ 2.32
ACADVL-236ENST00000583850 RIMBP3CA6NJZ7 1639 aa29.46■■■□□ 2.31
ACADVL-236ENST00000583850 RIMBP3BA6NNM3 1639 aa29.46■■■□□ 2.31
ACADVL-236ENST00000583850 RIMBP3Q9UFD9 1639 aa29.46■■■□□ 2.31
ACADVL-236ENST00000583850 TOPBP1Q92547 1522 aa29.45■■■□□ 2.3
ACADVL-236ENST00000583850 URB2Q14146 1524 aaKnown RBP29.41■■■□□ 2.3
ACADVL-236ENST00000583850 FGD5Q6ZNL6 1462 aa29.36■■■□□ 2.29
ACADVL-236ENST00000583850 AEBP2Q6ZN18 517 aaPredicted RBP29.29■■■□□ 2.28
ACADVL-236ENST00000583850 EEA1Q15075 1411 aa29.27■■■□□ 2.28
ACADVL-236ENST00000583850 ARHGEF11O15085 1522 aa29.26■■■□□ 2.27
ACADVL-236ENST00000583850 TRHP20396 242 aaPredicted RBP29.26■■■□□ 2.27
ACADVL-236ENST00000583850 CYB5RLQ6IPT4 315 aa29.25■■■□□ 2.27
ACADVL-236ENST00000583850 POLA1P09884 1462 aaPredicted RBP29.24■■■□□ 2.27
ACADVL-236ENST00000583850 FAM9AQ8IZU1 332 aaPredicted RBP29.22■■■□□ 2.27
ACADVL-236ENST00000583850 SOGA1O94964 1423 aa29.2■■■□□ 2.27
ACADVL-236ENST00000583850 WDR97A6NE52 1622 aa29.12■■■□□ 2.25
ACADVL-236ENST00000583850 KIF27Q86VH2 1401 aa29.12■■■□□ 2.25
ACADVL-236ENST00000583850 RAD54L2Q9Y4B4 1467 aa29.1■■■□□ 2.25
ACADVL-236ENST00000583850 ABCA10Q8WWZ4 1543 aa29.1■■■□□ 2.25
ACADVL-236ENST00000583850 RUSC2Q8N2Y8 1516 aa29.09■■■□□ 2.25
ACADVL-236ENST00000583850 TARBP1Q13395 1621 aaKnown RBP29.05■■■□□ 2.24
ACADVL-236ENST00000583850 CSRNP3Q8WYN3 585 aa29.01■■■□□ 2.23
ACADVL-236ENST00000583850 IFT140Q96RY7 1462 aa29.01■■■□□ 2.23
ACADVL-236ENST00000583850 ABCA5Q8WWZ7 1642 aa28.94■■■□□ 2.22
ACADVL-236ENST00000583850 ARAP1Q96P48 1450 aa28.92■■■□□ 2.22
ACADVL-236ENST00000583850 KIF21BO75037 1637 aa28.91■■■□□ 2.22
ACADVL-236ENST00000583850 ZNF608Q9ULD9 1512 aaPredicted RBP28.91■■■□□ 2.22
ACADVL-236ENST00000583850 PBRM1Q86U86 1689 aa28.88■■■□□ 2.21
ACADVL-236ENST00000583850 GAPVD1Q14C86 1478 aa28.86■■■□□ 2.21
ACADVL-236ENST00000583850 TDRD9Q8NDG6 1382 aaKnown RBP28.84■■■□□ 2.21
ACADVL-236ENST00000583850 CUL7Q14999 1698 aa28.83■■■□□ 2.21
ACADVL-236ENST00000583850 LOC105371045A0A1W2PR82 267 aa28.83■■■□□ 2.21
ACADVL-236ENST00000583850 GOLGA3Q08378 1498 aa28.82■■■□□ 2.2
ACADVL-236ENST00000583850 ERICH3Q5RHP9 1530 aa28.8■■■□□ 2.2
ACADVL-236ENST00000583850 EHMT2Q96KQ7 1210 aa28.8■■■□□ 2.2
ACADVL-236ENST00000583850 EIF4G3O43432 1585 aaKnown RBP28.79■■■□□ 2.2
ACADVL-236ENST00000583850 IGF1RP08069 1367 aa28.75■■■□□ 2.19
ACADVL-236ENST00000583850 PRXQ9BXM0 1461 aa28.74■■■□□ 2.19
ACADVL-236ENST00000583850 AQRO60306 1485 aaKnown RBP eCLIP28.73■■■□□ 2.19
ACADVL-236ENST00000583850 GRIN2BQ13224 1484 aa28.72■■■□□ 2.19
ACADVL-236ENST00000583850 CARMIL1Q5VZK9 1371 aa28.69■■■□□ 2.18
ACADVL-236ENST00000583850 RAPGEF2Q9Y4G8 1499 aa28.67■■■□□ 2.18
ACADVL-236ENST00000583850 UBTFP17480 764 aaKnown RBP28.67■■■□□ 2.18
ACADVL-236ENST00000583850 ADAMTS12P58397 1594 aa28.6■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms