RNA–Protein interactions for RNA: ENST00000583837.5

BRIP1-205, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

TSL 5

Gene BRIP1, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-205ENST00000583837 NISCHQ9Y2I1 1504 aa24.29■■□□□ 1.48
BRIP1-205ENST00000583837 CCDC180Q9P1Z9 1646 aa21.86■■□□□ 1.09
BRIP1-205ENST00000583837 ABCC9O60706 1549 aa21.85■■□□□ 1.09
BRIP1-205ENST00000583837 RB1CC1Q8TDY2 1594 aa20.8■□□□□ 0.92
BRIP1-205ENST00000583837 NACADO15069 1562 aa20.67■□□□□ 0.9
BRIP1-205ENST00000583837 DNAJC5BQ9UF47 199 aa20.66■□□□□ 0.9
BRIP1-205ENST00000583837 MYO15BQ96JP2 1530 aa20.42■□□□□ 0.86
BRIP1-205ENST00000583837 UNC13AQ9UPW8 1703 aa20.41■□□□□ 0.86
BRIP1-205ENST00000583837 DCAF8L2P0C7V8 631 aa20.35■□□□□ 0.85
BRIP1-205ENST00000583837 PABPN1Q86U42 306 aaKnown RBP eCLIP20.31■□□□□ 0.84
BRIP1-205ENST00000583837 BICRAQ9NZM4 1560 aa20.27■□□□□ 0.84
BRIP1-205ENST00000583837 ZCCHC6Q5VYS8 1495 aaKnown RBP20.12■□□□□ 0.81
BRIP1-205ENST00000583837 DCAF1Q9Y4B6 1507 aa20.11■□□□□ 0.81
BRIP1-205ENST00000583837 SHROOM4Q9ULL8 1493 aa19.98■□□□□ 0.79
BRIP1-205ENST00000583837 SCRIBQ14160 1630 aa19.83■□□□□ 0.76
BRIP1-205ENST00000583837 CC2D2AQ9P2K1 1620 aa19.79■□□□□ 0.76
BRIP1-205ENST00000583837 EIF4G1Q04637 1599 aaKnown RBP19.74■□□□□ 0.75
BRIP1-205ENST00000583837 CECR2Q9BXF3 1484 aa19.72■□□□□ 0.75
BRIP1-205ENST00000583837 NCAPD3P42695 1498 aa19.1■□□□□ 0.65
BRIP1-205ENST00000583837 DNAJC5Q9H3Z4 198 aa19.01■□□□□ 0.63
BRIP1-205ENST00000583837 ATAD2BQ9ULI0 1458 aa19.01■□□□□ 0.63
BRIP1-205ENST00000583837 SMARCA4P51532 1647 aa18.96■□□□□ 0.63
BRIP1-205ENST00000583837 HMGXB3Q12766 1538 aa18.94■□□□□ 0.62
BRIP1-205ENST00000583837 CUX2O14529 1486 aa18.92■□□□□ 0.62
BRIP1-205ENST00000583837 SMARCA2P51531 1590 aa18.92■□□□□ 0.62
BRIP1-205ENST00000583837 PEG3Q9GZU2 1588 aa18.85■□□□□ 0.61
BRIP1-205ENST00000583837 BAZ1AQ9NRL2 1556 aaPredicted RBP18.84■□□□□ 0.61
BRIP1-205ENST00000583837 ERCC6Q03468 1493 aa18.83■□□□□ 0.6
BRIP1-205ENST00000583837 NESP48681 1621 aa18.78■□□□□ 0.6
BRIP1-205ENST00000583837 BAZ1BQ9UIG0 1483 aaKnown RBP18.77■□□□□ 0.59
BRIP1-205ENST00000583837 MROH2BQ7Z745 1585 aa18.71■□□□□ 0.59
BRIP1-205ENST00000583837 THOC2Q8NI27 1593 aaKnown RBP18.66■□□□□ 0.58
BRIP1-205ENST00000583837 LAMC3Q9Y6N6 1575 aa18.65■□□□□ 0.58
BRIP1-205ENST00000583837 KIF21AQ7Z4S6 1674 aa18.56■□□□□ 0.56
BRIP1-205ENST00000583837 PDS5BQ9NTI5 1447 aa18.5■□□□□ 0.55
BRIP1-205ENST00000583837 WIZO95785 1651 aa18.47■□□□□ 0.55
BRIP1-205ENST00000583837 CADPSQ9ULU8 1353 aa18.47■□□□□ 0.55
BRIP1-205ENST00000583837 SUPT5HO00267 1087 aaKnown RBP18.42■□□□□ 0.54
BRIP1-205ENST00000583837 WDR62O43379 1518 aa18.38■□□□□ 0.53
BRIP1-205ENST00000583837 RSF1Q96T23 1441 aaPredicted RBP18.37■□□□□ 0.53
BRIP1-205ENST00000583837 MRC2Q9UBG0 1479 aa18.37■□□□□ 0.53
BRIP1-205ENST00000583837 CFTRP13569 1480 aa18.27■□□□□ 0.52
BRIP1-205ENST00000583837 CEP164Q9UPV0 1460 aa18.26■□□□□ 0.51
BRIP1-205ENST00000583837 FANCD2Q9BXW9 1451 aa18.24■□□□□ 0.51
BRIP1-205ENST00000583837 TOP2AP11388 1531 aaKnown RBP18.23■□□□□ 0.51
BRIP1-205ENST00000583837 URB2Q14146 1524 aaKnown RBP18.13■□□□□ 0.49
BRIP1-205ENST00000583837 PRDM2Q13029 1718 aa18.09■□□□□ 0.49
BRIP1-205ENST00000583837 CCDC88BA6NC98 1476 aa18.02■□□□□ 0.48
BRIP1-205ENST00000583837 TRIM41Q8WV44 630 aa18.01■□□□□ 0.47
BRIP1-205ENST00000583837 OSCARQ8IYS5 282 aa17.99■□□□□ 0.47
BRIP1-205ENST00000583837 IFT140Q96RY7 1462 aa17.92■□□□□ 0.46
BRIP1-205ENST00000583837 TOPBP1Q92547 1522 aa17.91■□□□□ 0.46
BRIP1-205ENST00000583837 ZNF608Q9ULD9 1512 aaPredicted RBP17.91■□□□□ 0.46
BRIP1-205ENST00000583837 ABCC8Q09428 1581 aa17.85■□□□□ 0.45
BRIP1-205ENST00000583837 DNMBPQ6XZF7 1577 aa17.83■□□□□ 0.45
BRIP1-205ENST00000583837 RIMBP3CA6NJZ7 1639 aa17.81■□□□□ 0.44
BRIP1-205ENST00000583837 RIMBP3BA6NNM3 1639 aa17.81■□□□□ 0.44
BRIP1-205ENST00000583837 RIMBP3Q9UFD9 1639 aa17.81■□□□□ 0.44
BRIP1-205ENST00000583837 EIF4G3O43432 1585 aaKnown RBP17.81■□□□□ 0.44
BRIP1-205ENST00000583837 TARBP1Q13395 1621 aaKnown RBP17.8■□□□□ 0.44
BRIP1-205ENST00000583837 ARHGEF11O15085 1522 aa17.74■□□□□ 0.43
BRIP1-205ENST00000583837 POLA1P09884 1462 aaPredicted RBP17.73■□□□□ 0.43
BRIP1-205ENST00000583837 AQRO60306 1485 aaKnown RBP eCLIP17.72■□□□□ 0.43
BRIP1-205ENST00000583837 CHD1O14646 1710 aa17.69■□□□□ 0.42
BRIP1-205ENST00000583837 RAD54L2Q9Y4B4 1467 aa17.64■□□□□ 0.41
BRIP1-205ENST00000583837 WDR97A6NE52 1622 aa17.61■□□□□ 0.41
BRIP1-205ENST00000583837 SOGA1O94964 1423 aa17.6■□□□□ 0.41
BRIP1-205ENST00000583837 FGD5Q6ZNL6 1462 aa17.58■□□□□ 0.41
BRIP1-205ENST00000583837 CUX1P39880 1505 aa17.57■□□□□ 0.4
BRIP1-205ENST00000583837 ARAP1Q96P48 1450 aa17.57■□□□□ 0.4
BRIP1-205ENST00000583837 TDRD9Q8NDG6 1382 aaKnown RBP17.57■□□□□ 0.4
BRIP1-205ENST00000583837 CHIC1Q5VXU3 224 aa17.55■□□□□ 0.4
BRIP1-205ENST00000583837 CYB5RLQ6IPT4 315 aa17.54■□□□□ 0.4
BRIP1-205ENST00000583837 CLASP1Q7Z460 1538 aa17.52■□□□□ 0.4
BRIP1-205ENST00000583837 SNAPC4Q5SXM2 1469 aa17.52■□□□□ 0.4
BRIP1-205ENST00000583837 MAGI1Q96QZ7 1491 aaPredicted RBP17.5■□□□□ 0.39
BRIP1-205ENST00000583837 FBLN2P98095 1184 aa17.5■□□□□ 0.39
BRIP1-205ENST00000583837 GRIN2BQ13224 1484 aa17.47■□□□□ 0.39
BRIP1-205ENST00000583837 SYNJ1O43426 1573 aa17.45■□□□□ 0.38
BRIP1-205ENST00000583837 SYNJ2O15056 1496 aa17.44■□□□□ 0.38
BRIP1-205ENST00000583837 PBRM1Q86U86 1689 aa17.42■□□□□ 0.38
BRIP1-205ENST00000583837 ABCA5Q8WWZ7 1642 aa17.41■□□□□ 0.38
BRIP1-205ENST00000583837 CHMP7Q8WUX9 453 aaPredicted RBP17.41■□□□□ 0.38
BRIP1-205ENST00000583837 ABCA10Q8WWZ4 1543 aa17.41■□□□□ 0.38
BRIP1-205ENST00000583837 GAPVD1Q14C86 1478 aa17.4■□□□□ 0.38
BRIP1-205ENST00000583837 TRHP20396 242 aaPredicted RBP17.31■□□□□ 0.36
BRIP1-205ENST00000583837 WRNQ14191 1432 aaPredicted RBP eCLIP17.3■□□□□ 0.366e-6■■■□□ 16.7
BRIP1-205ENST00000583837 BIVM-ERCC5R4GMW8 1640 aa17.29■□□□□ 0.36
BRIP1-205ENST00000583837 TOP2BQ02880 1626 aa17.28■□□□□ 0.36
BRIP1-205ENST00000583837 GRIN2AQ12879 1464 aa17.26■□□□□ 0.35
BRIP1-205ENST00000583837 ADAMTS12P58397 1594 aa17.26■□□□□ 0.35
BRIP1-205ENST00000583837 NUP160Q12769 1436 aa17.25■□□□□ 0.35
BRIP1-205ENST00000583837 CEP170Q5SW79 1584 aa17.23■□□□□ 0.35
BRIP1-205ENST00000583837 ERCC6L2Q5T890 1561 aa17.23■□□□□ 0.35
BRIP1-205ENST00000583837 SHROOM2Q13796 1616 aa17.21■□□□□ 0.35
BRIP1-205ENST00000583837 ERICH3Q5RHP9 1530 aa17.18■□□□□ 0.34
BRIP1-205ENST00000583837 FHAD1B1AJZ9 1412 aa17.18■□□□□ 0.34
BRIP1-205ENST00000583837 FAM9AQ8IZU1 332 aaPredicted RBP17.04■□□□□ 0.32
BRIP1-205ENST00000583837 RUSC2Q8N2Y8 1516 aa17.02■□□□□ 0.32
BRIP1-205ENST00000583837 PRG4Q92954 1404 aaPredicted RBP17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms