RNA–Protein interactions for RNA: ENST00000583525.1

KSR1-218, Transcript of kinase suppressor of ras 1, humanhuman

TSL 2

Gene KSR1, Length 428 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KSR1-218ENST00000583525 NISCHQ9Y2I1 1504 aa26.67■■□□□ 1.86
KSR1-218ENST00000583525 CCDC180Q9P1Z9 1646 aa23.56■■□□□ 1.36
KSR1-218ENST00000583525 ABCC9O60706 1549 aa22.49■■□□□ 1.19
KSR1-218ENST00000583525 ZCCHC6Q5VYS8 1495 aaKnown RBP22.34■■□□□ 1.17
KSR1-218ENST00000583525 DCAF1Q9Y4B6 1507 aa22.13■■□□□ 1.13
KSR1-218ENST00000583525 MYO15BQ96JP2 1530 aa22.06■■□□□ 1.12
KSR1-218ENST00000583525 NACADO15069 1562 aa22.01■■□□□ 1.11
KSR1-218ENST00000583525 DCAF8L2P0C7V8 631 aa22.01■■□□□ 1.11
KSR1-218ENST00000583525 RB1CC1Q8TDY2 1594 aa21.91■■□□□ 1.1
KSR1-218ENST00000583525 SCRIBQ14160 1630 aa21.49■■□□□ 1.03
KSR1-218ENST00000583525 UNC13AQ9UPW8 1703 aa21.4■■□□□ 1.02
KSR1-218ENST00000583525 SHROOM4Q9ULL8 1493 aa21.31■■□□□ 1
KSR1-218ENST00000583525 BICRAQ9NZM4 1560 aa21.17■□□□□ 0.98
KSR1-218ENST00000583525 PABPN1Q86U42 306 aaKnown RBP eCLIP21.08■□□□□ 0.97
KSR1-218ENST00000583525 CECR2Q9BXF3 1484 aa20.67■□□□□ 0.9
KSR1-218ENST00000583525 BAZ1AQ9NRL2 1556 aaPredicted RBP20.67■□□□□ 0.9
KSR1-218ENST00000583525 SMARCA4P51532 1647 aa20.6■□□□□ 0.89
KSR1-218ENST00000583525 EIF4G1Q04637 1599 aaKnown RBP20.6■□□□□ 0.89
KSR1-218ENST00000583525 MROH2BQ7Z745 1585 aa20.53■□□□□ 0.88
KSR1-218ENST00000583525 RSF1Q96T23 1441 aaPredicted RBP20.48■□□□□ 0.87
KSR1-218ENST00000583525 PEG3Q9GZU2 1588 aa20.41■□□□□ 0.86
KSR1-218ENST00000583525 SMARCA2P51531 1590 aa20.4■□□□□ 0.86
KSR1-218ENST00000583525 CC2D2AQ9P2K1 1620 aa20.39■□□□□ 0.86
KSR1-218ENST00000583525 ATAD2BQ9ULI0 1458 aa20.35■□□□□ 0.85
KSR1-218ENST00000583525 WIZO95785 1651 aa20.35■□□□□ 0.85
KSR1-218ENST00000583525 SUPT5HO00267 1087 aaKnown RBP20.31■□□□□ 0.84
KSR1-218ENST00000583525 NCAPD3P42695 1498 aa20.26■□□□□ 0.83
KSR1-218ENST00000583525 DNAJC5BQ9UF47 199 aa20.26■□□□□ 0.83
KSR1-218ENST00000583525 HMGXB3Q12766 1538 aa20.26■□□□□ 0.83
KSR1-218ENST00000583525 BAZ1BQ9UIG0 1483 aaKnown RBP20.24■□□□□ 0.83
KSR1-218ENST00000583525 TOP2AP11388 1531 aaKnown RBP20.21■□□□□ 0.83
KSR1-218ENST00000583525 CCDC88BA6NC98 1476 aa19.92■□□□□ 0.78
KSR1-218ENST00000583525 AEBP2Q6ZN18 517 aaPredicted RBP19.77■□□□□ 0.76
KSR1-218ENST00000583525 CADPSQ9ULU8 1353 aa19.7■□□□□ 0.74
KSR1-218ENST00000583525 CFTRP13569 1480 aa19.69■□□□□ 0.74
KSR1-218ENST00000583525 LAMC3Q9Y6N6 1575 aa19.69■□□□□ 0.74
KSR1-218ENST00000583525 PRDM2Q13029 1718 aa19.66■□□□□ 0.74
KSR1-218ENST00000583525 NESP48681 1621 aa19.58■□□□□ 0.73
KSR1-218ENST00000583525 PDS5BQ9NTI5 1447 aa19.53■□□□□ 0.72
KSR1-218ENST00000583525 FANCD2Q9BXW9 1451 aa19.48■□□□□ 0.71
KSR1-218ENST00000583525 CEP164Q9UPV0 1460 aa19.43■□□□□ 0.7
KSR1-218ENST00000583525 KIF21AQ7Z4S6 1674 aa19.43■□□□□ 0.7
KSR1-218ENST00000583525 ERCC6Q03468 1493 aa19.4■□□□□ 0.7
KSR1-218ENST00000583525 ABCC8Q09428 1581 aa19.34■□□□□ 0.69
KSR1-218ENST00000583525 WRNQ14191 1432 aaPredicted RBP eCLIP19.33■□□□□ 0.68
KSR1-218ENST00000583525 CHIC1Q5VXU3 224 aa19.31■□□□□ 0.68
KSR1-218ENST00000583525 MRC2Q9UBG0 1479 aa19.3■□□□□ 0.68
KSR1-218ENST00000583525 DNMBPQ6XZF7 1577 aa19.27■□□□□ 0.68
KSR1-218ENST00000583525 CUX1P39880 1505 aa19.25■□□□□ 0.67
KSR1-218ENST00000583525 TOP2BQ02880 1626 aa19.25■□□□□ 0.67
KSR1-218ENST00000583525 BIVM-ERCC5R4GMW8 1640 aa19.25■□□□□ 0.67
KSR1-218ENST00000583525 SYNJ1O43426 1573 aa19.24■□□□□ 0.67
KSR1-218ENST00000583525 THOC2Q8NI27 1593 aaKnown RBP19.24■□□□□ 0.67
KSR1-218ENST00000583525 URB2Q14146 1524 aaKnown RBP19.24■□□□□ 0.67
KSR1-218ENST00000583525 TOPBP1Q92547 1522 aa19.22■□□□□ 0.67
KSR1-218ENST00000583525 WDR62O43379 1518 aa19.21■□□□□ 0.67
KSR1-218ENST00000583525 TRIM41Q8WV44 630 aa19.18■□□□□ 0.66
KSR1-218ENST00000583525 FGD5Q6ZNL6 1462 aa19.12■□□□□ 0.65
KSR1-218ENST00000583525 POLA1P09884 1462 aaPredicted RBP19.09■□□□□ 0.65
KSR1-218ENST00000583525 CUX2O14529 1486 aa19.03■□□□□ 0.64
KSR1-218ENST00000583525 SOGA1O94964 1423 aa19.01■□□□□ 0.63
KSR1-218ENST00000583525 IFT140Q96RY7 1462 aa19.01■□□□□ 0.63
KSR1-218ENST00000583525 ABCA10Q8WWZ4 1543 aa18.98■□□□□ 0.63
KSR1-218ENST00000583525 TARBP1Q13395 1621 aaKnown RBP18.97■□□□□ 0.63
KSR1-218ENST00000583525 RAD54L2Q9Y4B4 1467 aa18.97■□□□□ 0.63
KSR1-218ENST00000583525 WDR97A6NE52 1622 aa18.96■□□□□ 0.63
KSR1-218ENST00000583525 EEA1Q15075 1411 aa18.91■□□□□ 0.62
KSR1-218ENST00000583525 KIF27Q86VH2 1401 aa18.91■□□□□ 0.62
KSR1-218ENST00000583525 ABCA5Q8WWZ7 1642 aa18.86■□□□□ 0.61
KSR1-218ENST00000583525 RUSC2Q8N2Y8 1516 aa18.83■□□□□ 0.6
KSR1-218ENST00000583525 EIF4G3O43432 1585 aaKnown RBP18.82■□□□□ 0.6
KSR1-218ENST00000583525 ZNF608Q9ULD9 1512 aaPredicted RBP18.82■□□□□ 0.6
KSR1-218ENST00000583525 GAPVD1Q14C86 1478 aa18.82■□□□□ 0.6
KSR1-218ENST00000583525 TDRD9Q8NDG6 1382 aaKnown RBP18.81■□□□□ 0.6
KSR1-218ENST00000583525 PBRM1Q86U86 1689 aa18.78■□□□□ 0.6
KSR1-218ENST00000583525 ERICH3Q5RHP9 1530 aa18.78■□□□□ 0.6
KSR1-218ENST00000583525 AQRO60306 1485 aaKnown RBP eCLIP18.77■□□□□ 0.592e-12■■■■□ 26.1
KSR1-218ENST00000583525 FAM9AQ8IZU1 332 aaPredicted RBP18.76■□□□□ 0.59
KSR1-218ENST00000583525 GRIN2BQ13224 1484 aa18.76■□□□□ 0.59
KSR1-218ENST00000583525 CUL7Q14999 1698 aa18.73■□□□□ 0.59
KSR1-218ENST00000583525 IGF1RP08069 1367 aa18.72■□□□□ 0.59
KSR1-218ENST00000583525 CSRNP3Q8WYN3 585 aa18.72■□□□□ 0.59
KSR1-218ENST00000583525 MAGI1Q96QZ7 1491 aaPredicted RBP18.68■□□□□ 0.58
KSR1-218ENST00000583525 SNAPC4Q5SXM2 1469 aa18.65■□□□□ 0.58
KSR1-218ENST00000583525 ADAMTS12P58397 1594 aa18.65■□□□□ 0.58
KSR1-218ENST00000583525 KIF21BO75037 1637 aa18.65■□□□□ 0.58
KSR1-218ENST00000583525 CARMIL1Q5VZK9 1371 aa18.64■□□□□ 0.57
KSR1-218ENST00000583525 FHAD1B1AJZ9 1412 aa18.64■□□□□ 0.57
KSR1-218ENST00000583525 PRXQ9BXM0 1461 aa18.64■□□□□ 0.57
KSR1-218ENST00000583525 RAPGEF2Q9Y4G8 1499 aa18.6■□□□□ 0.57
KSR1-218ENST00000583525 SYNJ2O15056 1496 aa18.58■□□□□ 0.57
KSR1-218ENST00000583525 GOLGA3Q08378 1498 aa18.58■□□□□ 0.56
KSR1-218ENST00000583525 LOC105371045A0A1W2PR82 267 aa18.55■□□□□ 0.56
KSR1-218ENST00000583525 CHMP7Q8WUX9 453 aaPredicted RBP18.51■□□□□ 0.55
KSR1-218ENST00000583525 GRIN2AQ12879 1464 aa18.51■□□□□ 0.55
KSR1-218ENST00000583525 CHD1O14646 1710 aa18.49■□□□□ 0.55
KSR1-218ENST00000583525 EHMT2Q96KQ7 1210 aa18.47■□□□□ 0.55
KSR1-218ENST00000583525 FBLN2P98095 1184 aa18.46■□□□□ 0.55
KSR1-218ENST00000583525 UBTFP17480 764 aaKnown RBP18.43■□□□□ 0.54
KSR1-218ENST00000583525 CTTNBP2Q8WZ74 1663 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms