RNA–Protein interactions for RNA: ENST00000583399.5

CNDP2-222, Transcript of carnosine dipeptidase 2, humanhuman

TSL 2

Gene CNDP2, Length 601 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNDP2-222ENST00000583399 NISCHQ9Y2I1 1504 aa32.8■■■□□ 2.84
CNDP2-222ENST00000583399 CCDC180Q9P1Z9 1646 aa29.31■■■□□ 2.28
CNDP2-222ENST00000583399 ABCC9O60706 1549 aa28.91■■■□□ 2.22
CNDP2-222ENST00000583399 DNAJC5BQ9UF47 199 aa27.51■■□□□ 1.99
CNDP2-222ENST00000583399 RB1CC1Q8TDY2 1594 aa27.48■■□□□ 1.99
CNDP2-222ENST00000583399 NACADO15069 1562 aa27.42■■□□□ 1.98
CNDP2-222ENST00000583399 ZCCHC6Q5VYS8 1495 aaKnown RBP27.33■■□□□ 1.97
CNDP2-222ENST00000583399 DCAF8L2P0C7V8 631 aa27.32■■□□□ 1.96
CNDP2-222ENST00000583399 MYO15BQ96JP2 1530 aa27.21■■□□□ 1.95
CNDP2-222ENST00000583399 DCAF1Q9Y4B6 1507 aa27.14■■□□□ 1.94
CNDP2-222ENST00000583399 UNC13AQ9UPW8 1703 aa27.1■■□□□ 1.93
CNDP2-222ENST00000583399 PABPN1Q86U42 306 aaKnown RBP eCLIP26.94■■□□□ 1.92e-6■□□□□ 11
CNDP2-222ENST00000583399 SCRIBQ14160 1630 aa26.69■■□□□ 1.86
CNDP2-222ENST00000583399 BICRAQ9NZM4 1560 aa26.63■■□□□ 1.85
CNDP2-222ENST00000583399 SHROOM4Q9ULL8 1493 aa26.3■■□□□ 1.8
CNDP2-222ENST00000583399 CECR2Q9BXF3 1484 aa26.12■■□□□ 1.77
CNDP2-222ENST00000583399 CC2D2AQ9P2K1 1620 aa26.06■■□□□ 1.76
CNDP2-222ENST00000583399 EIF4G1Q04637 1599 aaKnown RBP25.97■■□□□ 1.75
CNDP2-222ENST00000583399 SMARCA4P51532 1647 aa25.53■■□□□ 1.68
CNDP2-222ENST00000583399 DNAJC5Q9H3Z4 198 aa25.51■■□□□ 1.67
CNDP2-222ENST00000583399 BAZ1AQ9NRL2 1556 aaPredicted RBP25.45■■□□□ 1.66
CNDP2-222ENST00000583399 SMARCA2P51531 1590 aa25.3■■□□□ 1.64
CNDP2-222ENST00000583399 MROH2BQ7Z745 1585 aa25.29■■□□□ 1.64
CNDP2-222ENST00000583399 ATAD2BQ9ULI0 1458 aa25.26■■□□□ 1.63
CNDP2-222ENST00000583399 PEG3Q9GZU2 1588 aa25.22■■□□□ 1.63
CNDP2-222ENST00000583399 NCAPD3P42695 1498 aa25.21■■□□□ 1.63
CNDP2-222ENST00000583399 HMGXB3Q12766 1538 aa25.19■■□□□ 1.62
CNDP2-222ENST00000583399 WIZO95785 1651 aa25.13■■□□□ 1.61
CNDP2-222ENST00000583399 CUX2O14529 1486 aa25.09■■□□□ 1.61
CNDP2-222ENST00000583399 BAZ1BQ9UIG0 1483 aaKnown RBP25.09■■□□□ 1.61
CNDP2-222ENST00000583399 ERCC6Q03468 1493 aa24.98■■□□□ 1.59
CNDP2-222ENST00000583399 RSF1Q96T23 1441 aaPredicted RBP24.95■■□□□ 1.58
CNDP2-222ENST00000583399 TOP2AP11388 1531 aaKnown RBP24.79■■□□□ 1.56
CNDP2-222ENST00000583399 NESP48681 1621 aa24.75■■□□□ 1.55
CNDP2-222ENST00000583399 LAMC3Q9Y6N6 1575 aa24.67■■□□□ 1.54
CNDP2-222ENST00000583399 KIF21AQ7Z4S6 1674 aa24.56■■□□□ 1.52
CNDP2-222ENST00000583399 PRDM2Q13029 1718 aa24.54■■□□□ 1.52
CNDP2-222ENST00000583399 THOC2Q8NI27 1593 aaKnown RBP24.5■■□□□ 1.51
CNDP2-222ENST00000583399 PDS5BQ9NTI5 1447 aa24.48■■□□□ 1.51
CNDP2-222ENST00000583399 CADPSQ9ULU8 1353 aa24.46■■□□□ 1.51
CNDP2-222ENST00000583399 CCDC88BA6NC98 1476 aa24.44■■□□□ 1.5
CNDP2-222ENST00000583399 CFTRP13569 1480 aa24.36■■□□□ 1.49
CNDP2-222ENST00000583399 SUPT5HO00267 1087 aaKnown RBP24.34■■□□□ 1.49
CNDP2-222ENST00000583399 FANCD2Q9BXW9 1451 aa24.25■■□□□ 1.47
CNDP2-222ENST00000583399 MRC2Q9UBG0 1479 aa24.24■■□□□ 1.47
CNDP2-222ENST00000583399 CEP164Q9UPV0 1460 aa24.24■■□□□ 1.47
CNDP2-222ENST00000583399 WDR62O43379 1518 aa24.18■■□□□ 1.46
CNDP2-222ENST00000583399 TRIM41Q8WV44 630 aa24.14■■□□□ 1.45
CNDP2-222ENST00000583399 URB2Q14146 1524 aaKnown RBP24.02■■□□□ 1.44
CNDP2-222ENST00000583399 OSCARQ8IYS5 282 aa23.97■■□□□ 1.43
CNDP2-222ENST00000583399 DNMBPQ6XZF7 1577 aa23.91■■□□□ 1.42
CNDP2-222ENST00000583399 TOPBP1Q92547 1522 aa23.89■■□□□ 1.41
CNDP2-222ENST00000583399 ABCC8Q09428 1581 aa23.87■■□□□ 1.41
CNDP2-222ENST00000583399 CUX1P39880 1505 aa23.74■■□□□ 1.39
CNDP2-222ENST00000583399 IFT140Q96RY7 1462 aa23.69■■□□□ 1.38
CNDP2-222ENST00000583399 TARBP1Q13395 1621 aaKnown RBP23.69■■□□□ 1.38
CNDP2-222ENST00000583399 POLA1P09884 1462 aaPredicted RBP23.67■■□□□ 1.38
CNDP2-222ENST00000583399 BIVM-ERCC5R4GMW8 1640 aa23.65■■□□□ 1.38
CNDP2-222ENST00000583399 FGD5Q6ZNL6 1462 aa23.63■■□□□ 1.37
CNDP2-222ENST00000583399 EIF4G3O43432 1585 aaKnown RBP23.61■■□□□ 1.37
CNDP2-222ENST00000583399 ZNF608Q9ULD9 1512 aaPredicted RBP23.6■■□□□ 1.37
CNDP2-222ENST00000583399 WDR97A6NE52 1622 aa23.6■■□□□ 1.37
CNDP2-222ENST00000583399 TOP2BQ02880 1626 aa23.59■■□□□ 1.37
CNDP2-222ENST00000583399 SYNJ1O43426 1573 aa23.59■■□□□ 1.37
CNDP2-222ENST00000583399 RAD54L2Q9Y4B4 1467 aa23.56■■□□□ 1.36
CNDP2-222ENST00000583399 WRNQ14191 1432 aaPredicted RBP eCLIP23.55■■□□□ 1.36
CNDP2-222ENST00000583399 SOGA1O94964 1423 aa23.53■■□□□ 1.36
CNDP2-222ENST00000583399 RIMBP3CA6NJZ7 1639 aa23.5■■□□□ 1.35
CNDP2-222ENST00000583399 RIMBP3BA6NNM3 1639 aa23.5■■□□□ 1.35
CNDP2-222ENST00000583399 RIMBP3Q9UFD9 1639 aa23.5■■□□□ 1.35
CNDP2-222ENST00000583399 ARHGEF11O15085 1522 aa23.48■■□□□ 1.35
CNDP2-222ENST00000583399 PBRM1Q86U86 1689 aa23.48■■□□□ 1.35
CNDP2-222ENST00000583399 AQRO60306 1485 aaKnown RBP eCLIP23.44■■□□□ 1.34
CNDP2-222ENST00000583399 CHD1O14646 1710 aa23.42■■□□□ 1.34
CNDP2-222ENST00000583399 CYB5RLQ6IPT4 315 aa23.39■■□□□ 1.33
CNDP2-222ENST00000583399 ABCA5Q8WWZ7 1642 aa23.39■■□□□ 1.33
CNDP2-222ENST00000583399 ABCA10Q8WWZ4 1543 aa23.38■■□□□ 1.33
CNDP2-222ENST00000583399 TDRD9Q8NDG6 1382 aaKnown RBP23.38■■□□□ 1.33
CNDP2-222ENST00000583399 GAPVD1Q14C86 1478 aa23.3■■□□□ 1.32
CNDP2-222ENST00000583399 GRIN2BQ13224 1484 aa23.28■■□□□ 1.32
CNDP2-222ENST00000583399 SNAPC4Q5SXM2 1469 aa23.27■■□□□ 1.32
CNDP2-222ENST00000583399 FBLN2P98095 1184 aa23.26■■□□□ 1.31
CNDP2-222ENST00000583399 ARAP1Q96P48 1450 aa23.24■■□□□ 1.31
CNDP2-222ENST00000583399 MAGI1Q96QZ7 1491 aaPredicted RBP23.23■■□□□ 1.31
CNDP2-222ENST00000583399 TRHP20396 242 aaPredicted RBP23.18■■□□□ 1.3
CNDP2-222ENST00000583399 ADAMTS12P58397 1594 aa23.15■■□□□ 1.3
CNDP2-222ENST00000583399 ERICH3Q5RHP9 1530 aa23.14■■□□□ 1.3
CNDP2-222ENST00000583399 SYNJ2O15056 1496 aa23.13■■□□□ 1.29
CNDP2-222ENST00000583399 CHMP7Q8WUX9 453 aaPredicted RBP23.09■■□□□ 1.29
CNDP2-222ENST00000583399 CLASP1Q7Z460 1538 aa23.04■■□□□ 1.28
CNDP2-222ENST00000583399 CUL7Q14999 1698 aa23.04■■□□□ 1.28
CNDP2-222ENST00000583399 KIF27Q86VH2 1401 aa23.04■■□□□ 1.28
CNDP2-222ENST00000583399 FHAD1B1AJZ9 1412 aa23■■□□□ 1.27
CNDP2-222ENST00000583399 GRIN2AQ12879 1464 aa23■■□□□ 1.27
CNDP2-222ENST00000583399 CEP170Q5SW79 1584 aa22.95■■□□□ 1.26
CNDP2-222ENST00000583399 IGF1RP08069 1367 aa22.89■■□□□ 1.25
CNDP2-222ENST00000583399 RUSC2Q8N2Y8 1516 aa22.88■■□□□ 1.25
CNDP2-222ENST00000583399 NUP160Q12769 1436 aa22.85■■□□□ 1.25
CNDP2-222ENST00000583399 SHROOM2Q13796 1616 aa22.81■■□□□ 1.24
CNDP2-222ENST00000583399 CARMIL1Q5VZK9 1371 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms