RNA–Protein interactions for RNA: ENST00000583161.1

AC006441.4-201, humanhuman

TSL 3 BASIC

Gene AC006441.4, Length 636 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006441.4-201ENST00000583161 NISCHQ9Y2I1 1504 aa22.11■■□□□ 1.13
AC006441.4-201ENST00000583161 CCDC180Q9P1Z9 1646 aa19.41■□□□□ 0.7
AC006441.4-201ENST00000583161 ABCC9O60706 1549 aa19.25■□□□□ 0.67
AC006441.4-201ENST00000583161 ZCCHC6Q5VYS8 1495 aaKnown RBP18.58■□□□□ 0.56
AC006441.4-201ENST00000583161 DCAF1Q9Y4B6 1507 aa18.4■□□□□ 0.54
AC006441.4-201ENST00000583161 RB1CC1Q8TDY2 1594 aa18.27■□□□□ 0.52
AC006441.4-201ENST00000583161 DCAF8L2P0C7V8 631 aa18.24■□□□□ 0.51
AC006441.4-201ENST00000583161 MYO15BQ96JP2 1530 aa18.21■□□□□ 0.51
AC006441.4-201ENST00000583161 NACADO15069 1562 aa18.1■□□□□ 0.49
AC006441.4-201ENST00000583161 DNAJC5BQ9UF47 199 aa18.08■□□□□ 0.48
AC006441.4-201ENST00000583161 UNC13AQ9UPW8 1703 aa18.01■□□□□ 0.47
AC006441.4-201ENST00000583161 SHROOM4Q9ULL8 1493 aa17.91■□□□□ 0.46
AC006441.4-201ENST00000583161 PABPN1Q86U42 306 aaKnown RBP eCLIP17.85■□□□□ 0.45
AC006441.4-201ENST00000583161 BICRAQ9NZM4 1560 aa17.77■□□□□ 0.44
AC006441.4-201ENST00000583161 SCRIBQ14160 1630 aa17.67■□□□□ 0.42
AC006441.4-201ENST00000583161 CC2D2AQ9P2K1 1620 aa17.41■□□□□ 0.38
AC006441.4-201ENST00000583161 SUPT5HO00267 1087 aaKnown RBP17.37■□□□□ 0.37
AC006441.4-201ENST00000583161 EIF4G1Q04637 1599 aaKnown RBP17.33■□□□□ 0.37
AC006441.4-201ENST00000583161 CECR2Q9BXF3 1484 aa17.32■□□□□ 0.36
AC006441.4-201ENST00000583161 BAZ1AQ9NRL2 1556 aaPredicted RBP17.17■□□□□ 0.34
AC006441.4-201ENST00000583161 RSF1Q96T23 1441 aaPredicted RBP17.11■□□□□ 0.33
AC006441.4-201ENST00000583161 SMARCA4P51532 1647 aa16.99■□□□□ 0.31
AC006441.4-201ENST00000583161 MROH2BQ7Z745 1585 aa16.98■□□□□ 0.31
AC006441.4-201ENST00000583161 WIZO95785 1651 aa16.87■□□□□ 0.29
AC006441.4-201ENST00000583161 SMARCA2P51531 1590 aa16.82■□□□□ 0.28
AC006441.4-201ENST00000583161 PEG3Q9GZU2 1588 aa16.82■□□□□ 0.28
AC006441.4-201ENST00000583161 TOP2AP11388 1531 aaKnown RBP16.81■□□□□ 0.28
AC006441.4-201ENST00000583161 ATAD2BQ9ULI0 1458 aa16.67■□□□□ 0.26
AC006441.4-201ENST00000583161 NCAPD3P42695 1498 aa16.67■□□□□ 0.26
AC006441.4-201ENST00000583161 BAZ1BQ9UIG0 1483 aaKnown RBP16.67■□□□□ 0.26
AC006441.4-201ENST00000583161 DNAJC5Q9H3Z4 198 aa16.64■□□□□ 0.25
AC006441.4-201ENST00000583161 CHIC1Q5VXU3 224 aa16.63■□□□□ 0.25
AC006441.4-201ENST00000583161 ERCC6Q03468 1493 aa16.61■□□□□ 0.25
AC006441.4-201ENST00000583161 HMGXB3Q12766 1538 aa16.6■□□□□ 0.25
AC006441.4-201ENST00000583161 CUX2O14529 1486 aa16.6■□□□□ 0.25
AC006441.4-201ENST00000583161 CCDC88BA6NC98 1476 aa16.55■□□□□ 0.24
AC006441.4-201ENST00000583161 NESP48681 1621 aa16.52■□□□□ 0.23
AC006441.4-201ENST00000583161 TRIM41Q8WV44 630 aa16.46■□□□□ 0.23
AC006441.4-201ENST00000583161 THOC2Q8NI27 1593 aaKnown RBP16.42■□□□□ 0.22
AC006441.4-201ENST00000583161 KIF21AQ7Z4S6 1674 aa16.38■□□□□ 0.21
AC006441.4-201ENST00000583161 LAMC3Q9Y6N6 1575 aa16.37■□□□□ 0.21
AC006441.4-201ENST00000583161 PRDM2Q13029 1718 aa16.26■□□□□ 0.19
AC006441.4-201ENST00000583161 PDS5BQ9NTI5 1447 aa16.21■□□□□ 0.19
AC006441.4-201ENST00000583161 WRNQ14191 1432 aaPredicted RBP eCLIP16.2■□□□□ 0.18
AC006441.4-201ENST00000583161 CFTRP13569 1480 aa16.2■□□□□ 0.18
AC006441.4-201ENST00000583161 EEA1Q15075 1411 aa16.18■□□□□ 0.18
AC006441.4-201ENST00000583161 ABCC8Q09428 1581 aa16.16■□□□□ 0.18
AC006441.4-201ENST00000583161 CADPSQ9ULU8 1353 aa16.15■□□□□ 0.18
AC006441.4-201ENST00000583161 MRC2Q9UBG0 1479 aa16.14■□□□□ 0.17
AC006441.4-201ENST00000583161 WDR62O43379 1518 aa16.12■□□□□ 0.17
AC006441.4-201ENST00000583161 TOP2BQ02880 1626 aa16.07■□□□□ 0.16
AC006441.4-201ENST00000583161 BIVM-ERCC5R4GMW8 1640 aa16.06■□□□□ 0.16
AC006441.4-201ENST00000583161 CEP164Q9UPV0 1460 aa16.05■□□□□ 0.16
AC006441.4-201ENST00000583161 FANCD2Q9BXW9 1451 aa16.02■□□□□ 0.15
AC006441.4-201ENST00000583161 SYNJ1O43426 1573 aa16.01■□□□□ 0.15
AC006441.4-201ENST00000583161 FAM9AQ8IZU1 332 aaPredicted RBP15.97■□□□□ 0.15
AC006441.4-201ENST00000583161 CSRNP3Q8WYN3 585 aa15.92■□□□□ 0.14
AC006441.4-201ENST00000583161 URB2Q14146 1524 aaKnown RBP15.91■□□□□ 0.14
AC006441.4-201ENST00000583161 CUX1P39880 1505 aa15.9■□□□□ 0.14
AC006441.4-201ENST00000583161 LOC105371045A0A1W2PR82 267 aa15.89■□□□□ 0.13
AC006441.4-201ENST00000583161 DNMBPQ6XZF7 1577 aa15.87■□□□□ 0.13
AC006441.4-201ENST00000583161 KIF27Q86VH2 1401 aa15.86■□□□□ 0.13
AC006441.4-201ENST00000583161 SOGA1O94964 1423 aa15.85■□□□□ 0.13
AC006441.4-201ENST00000583161 GOLGA3Q08378 1498 aa15.84■□□□□ 0.13
AC006441.4-201ENST00000583161 KIF21BO75037 1637 aa15.83■□□□□ 0.13
AC006441.4-201ENST00000583161 TOPBP1Q92547 1522 aa15.78■□□□□ 0.12
AC006441.4-201ENST00000583161 TNIKQ9UKE5 1360 aa15.77■□□□□ 0.12
AC006441.4-201ENST00000583161 FGD5Q6ZNL6 1462 aa15.77■□□□□ 0.11
AC006441.4-201ENST00000583161 UBTFP17480 764 aaKnown RBP15.76■□□□□ 0.11
AC006441.4-201ENST00000583161 ERICH3Q5RHP9 1530 aa15.75■□□□□ 0.11
AC006441.4-201ENST00000583161 OSCARQ8IYS5 282 aa15.74■□□□□ 0.11
AC006441.4-201ENST00000583161 ZNF608Q9ULD9 1512 aaPredicted RBP15.73■□□□□ 0.11
AC006441.4-201ENST00000583161 RUSC2Q8N2Y8 1516 aa15.72■□□□□ 0.11
AC006441.4-201ENST00000583161 IFT140Q96RY7 1462 aa15.71■□□□□ 0.1
AC006441.4-201ENST00000583161 RIMBP3CA6NJZ7 1639 aa15.7■□□□□ 0.1
AC006441.4-201ENST00000583161 RIMBP3BA6NNM3 1639 aa15.7■□□□□ 0.1
AC006441.4-201ENST00000583161 RIMBP3Q9UFD9 1639 aa15.7■□□□□ 0.1
AC006441.4-201ENST00000583161 EIF4G3O43432 1585 aaKnown RBP15.7■□□□□ 0.1
AC006441.4-201ENST00000583161 ABCA10Q8WWZ4 1543 aa15.69■□□□□ 0.1
AC006441.4-201ENST00000583161 POLA1P09884 1462 aaPredicted RBP15.67■□□□□ 0.1
AC006441.4-201ENST00000583161 EHMT2Q96KQ7 1210 aa15.66■□□□□ 0.1
AC006441.4-201ENST00000583161 CHD1O14646 1710 aa15.65■□□□□ 0.1
AC006441.4-201ENST00000583161 PRXQ9BXM0 1461 aa15.65■□□□□ 0.1
AC006441.4-201ENST00000583161 CEP162Q5TB80 1403 aa15.63■□□□□ 0.09
AC006441.4-201ENST00000583161 CUL7Q14999 1698 aa15.63■□□□□ 0.09
AC006441.4-201ENST00000583161 WDR97A6NE52 1622 aa15.62■□□□□ 0.09
AC006441.4-201ENST00000583161 ARHGEF11O15085 1522 aa15.61■□□□□ 0.09
AC006441.4-201ENST00000583161 TARBP1Q13395 1621 aaKnown RBP15.61■□□□□ 0.09
AC006441.4-201ENST00000583161 RAPGEF2Q9Y4G8 1499 aa15.59■□□□□ 0.09
AC006441.4-201ENST00000583161 IGF1RP08069 1367 aa15.57■□□□□ 0.08
AC006441.4-201ENST00000583161 CARMIL1Q5VZK9 1371 aa15.57■□□□□ 0.08
AC006441.4-201ENST00000583161 AQRO60306 1485 aaKnown RBP eCLIP15.54■□□□□ 0.08
AC006441.4-201ENST00000583161 RAD54L2Q9Y4B4 1467 aa15.54■□□□□ 0.08
AC006441.4-201ENST00000583161 CLIP1P30622 1438 aa15.53■□□□□ 0.08
AC006441.4-201ENST00000583161 GAPVD1Q14C86 1478 aa15.52■□□□□ 0.08
AC006441.4-201ENST00000583161 ABCA5Q8WWZ7 1642 aa15.52■□□□□ 0.08
AC006441.4-201ENST00000583161 APLP2Q06481 763 aa15.5■□□□□ 0.07
AC006441.4-201ENST00000583161 TRIM26Q12899 539 aaPredicted RBP15.5■□□□□ 0.07
AC006441.4-201ENST00000583161 ARAP1Q96P48 1450 aa15.45■□□□□ 0.06
AC006441.4-201ENST00000583161 PBRM1Q86U86 1689 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms