RNA–Protein interactions for RNA: ENST00000582614.1

MIR3939-201, Transcript of microRNA 3939, humanhuman

BASIC

Gene MIR3939, Length 106 nt, Biotype miRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR3939-201ENST00000582614 NISCHQ9Y2I1 1504 aa11.14□□□□□ -0.63
MIR3939-201ENST00000582614 ABCC9O60706 1549 aa10.38□□□□□ -0.75
MIR3939-201ENST00000582614 CCDC180Q9P1Z9 1646 aa10.08□□□□□ -0.8
MIR3939-201ENST00000582614 DNAJC5BQ9UF47 199 aa9.97□□□□□ -0.81
MIR3939-201ENST00000582614 RB1CC1Q8TDY2 1594 aa9.72□□□□□ -0.85
MIR3939-201ENST00000582614 PABPN1Q86U42 306 aaKnown RBP eCLIP9.66□□□□□ -0.86
MIR3939-201ENST00000582614 DCAF8L2P0C7V8 631 aa9.64□□□□□ -0.87
MIR3939-201ENST00000582614 NACADO15069 1562 aa9.58□□□□□ -0.88
MIR3939-201ENST00000582614 UNC13AQ9UPW8 1703 aa9.57□□□□□ -0.88
MIR3939-201ENST00000582614 BICRAQ9NZM4 1560 aa9.46□□□□□ -0.89
MIR3939-201ENST00000582614 CC2D2AQ9P2K1 1620 aa9.34□□□□□ -0.91
MIR3939-201ENST00000582614 CECR2Q9BXF3 1484 aa9.34□□□□□ -0.91
MIR3939-201ENST00000582614 MYO15BQ96JP2 1530 aa9.31□□□□□ -0.92
MIR3939-201ENST00000582614 DNAJC5Q9H3Z4 198 aa9.28□□□□□ -0.92
MIR3939-201ENST00000582614 EIF4G1Q04637 1599 aaKnown RBP9.24□□□□□ -0.93
MIR3939-201ENST00000582614 SCRIBQ14160 1630 aa9.23□□□□□ -0.93
MIR3939-201ENST00000582614 SHROOM4Q9ULL8 1493 aa9.21□□□□□ -0.94
MIR3939-201ENST00000582614 ZCCHC6Q5VYS8 1495 aaKnown RBP9.16□□□□□ -0.94
MIR3939-201ENST00000582614 DCAF1Q9Y4B6 1507 aa9.13□□□□□ -0.95
MIR3939-201ENST00000582614 CUX2O14529 1486 aa8.96□□□□□ -0.98
MIR3939-201ENST00000582614 ERCC6Q03468 1493 aa8.96□□□□□ -0.98
MIR3939-201ENST00000582614 NESP48681 1621 aa8.86□□□□□ -0.99
MIR3939-201ENST00000582614 TRIM41Q8WV44 630 aa8.85□□□□□ -0.99
MIR3939-201ENST00000582614 NCAPD3P42695 1498 aa8.84□□□□□ -0.99
MIR3939-201ENST00000582614 ATAD2BQ9ULI0 1458 aa8.81□□□□□ -1
MIR3939-201ENST00000582614 SMARCA2P51531 1590 aa8.76□□□□□ -1.01
MIR3939-201ENST00000582614 THOC2Q8NI27 1593 aaKnown RBP8.76□□□□□ -1.01
MIR3939-201ENST00000582614 SMARCA4P51532 1647 aa8.76□□□□□ -1.01
MIR3939-201ENST00000582614 HMGXB3Q12766 1538 aa8.75□□□□□ -1.01
MIR3939-201ENST00000582614 KIF21AQ7Z4S6 1674 aa8.74□□□□□ -1.01
MIR3939-201ENST00000582614 BAZ1BQ9UIG0 1483 aaKnown RBP8.72□□□□□ -1.01
MIR3939-201ENST00000582614 LAMC3Q9Y6N6 1575 aa8.69□□□□□ -1.02
MIR3939-201ENST00000582614 BAZ1AQ9NRL2 1556 aaPredicted RBP8.65□□□□□ -1.02
MIR3939-201ENST00000582614 PDS5BQ9NTI5 1447 aa8.65□□□□□ -1.02
MIR3939-201ENST00000582614 MROH2BQ7Z745 1585 aa8.62□□□□□ -1.03
MIR3939-201ENST00000582614 PEG3Q9GZU2 1588 aa8.61□□□□□ -1.03
MIR3939-201ENST00000582614 MRC2Q9UBG0 1479 aa8.6□□□□□ -1.03
MIR3939-201ENST00000582614 CADPSQ9ULU8 1353 aa8.59□□□□□ -1.03
MIR3939-201ENST00000582614 OSCARQ8IYS5 282 aa8.58□□□□□ -1.04
MIR3939-201ENST00000582614 WDR62O43379 1518 aa8.57□□□□□ -1.04
MIR3939-201ENST00000582614 WIZO95785 1651 aa8.53□□□□□ -1.04
MIR3939-201ENST00000582614 CEP164Q9UPV0 1460 aa8.52□□□□□ -1.05
MIR3939-201ENST00000582614 FANCD2Q9BXW9 1451 aa8.51□□□□□ -1.05
MIR3939-201ENST00000582614 RIMBP3CA6NJZ7 1639 aa8.5□□□□□ -1.05
MIR3939-201ENST00000582614 RIMBP3BA6NNM3 1639 aa8.5□□□□□ -1.05
MIR3939-201ENST00000582614 RIMBP3Q9UFD9 1639 aa8.5□□□□□ -1.05
MIR3939-201ENST00000582614 URB2Q14146 1524 aaKnown RBP8.46□□□□□ -1.05
MIR3939-201ENST00000582614 CYB5RLQ6IPT4 315 aa8.43□□□□□ -1.06
MIR3939-201ENST00000582614 CFTRP13569 1480 aa8.43□□□□□ -1.06
MIR3939-201ENST00000582614 TRHP20396 242 aaPredicted RBP8.42□□□□□ -1.06
MIR3939-201ENST00000582614 ARHGEF11O15085 1522 aa8.42□□□□□ -1.06
MIR3939-201ENST00000582614 ZNF608Q9ULD9 1512 aaPredicted RBP8.41□□□□□ -1.06
MIR3939-201ENST00000582614 PRDM2Q13029 1718 aa8.37□□□□□ -1.07
MIR3939-201ENST00000582614 CHD1O14646 1710 aa8.36□□□□□ -1.07
MIR3939-201ENST00000582614 IFT140Q96RY7 1462 aa8.35□□□□□ -1.07
MIR3939-201ENST00000582614 FBLN2P98095 1184 aa8.35□□□□□ -1.07
MIR3939-201ENST00000582614 TOP2AP11388 1531 aaKnown RBP8.34□□□□□ -1.07
MIR3939-201ENST00000582614 AEBP2Q6ZN18 517 aaPredicted RBP8.34□□□□□ -1.07
MIR3939-201ENST00000582614 RSF1Q96T23 1441 aaPredicted RBP8.34□□□□□ -1.07
MIR3939-201ENST00000582614 EIF4G3O43432 1585 aaKnown RBP8.33□□□□□ -1.08
MIR3939-201ENST00000582614 ARAP1Q96P48 1450 aa8.32□□□□□ -1.08
MIR3939-201ENST00000582614 TOPBP1Q92547 1522 aa8.32□□□□□ -1.08
MIR3939-201ENST00000582614 AQRO60306 1485 aaKnown RBP eCLIP8.32□□□□□ -1.08
MIR3939-201ENST00000582614 CCDC88BA6NC98 1476 aa8.28□□□□□ -1.08
MIR3939-201ENST00000582614 TARBP1Q13395 1621 aaKnown RBP8.26□□□□□ -1.09
MIR3939-201ENST00000582614 DNMBPQ6XZF7 1577 aa8.26□□□□□ -1.09
MIR3939-201ENST00000582614 ABCC8Q09428 1581 aa8.24□□□□□ -1.09
MIR3939-201ENST00000582614 TDRD9Q8NDG6 1382 aaKnown RBP8.23□□□□□ -1.09
MIR3939-201ENST00000582614 RAD54L2Q9Y4B4 1467 aa8.23□□□□□ -1.09
MIR3939-201ENST00000582614 POLA1P09884 1462 aaPredicted RBP8.21□□□□□ -1.09
MIR3939-201ENST00000582614 CHMP7Q8WUX9 453 aaPredicted RBP8.21□□□□□ -1.1
MIR3939-201ENST00000582614 SNAPC4Q5SXM2 1469 aa8.19□□□□□ -1.1
MIR3939-201ENST00000582614 SOGA1O94964 1423 aa8.19□□□□□ -1.1
MIR3939-201ENST00000582614 CLASP1Q7Z460 1538 aa8.19□□□□□ -1.1
MIR3939-201ENST00000582614 SYNJ1O43426 1573 aa8.17□□□□□ -1.1
MIR3939-201ENST00000582614 GAPVD1Q14C86 1478 aa8.14□□□□□ -1.11
MIR3939-201ENST00000582614 FGD5Q6ZNL6 1462 aa8.14□□□□□ -1.11
MIR3939-201ENST00000582614 SYNJ2O15056 1496 aa8.12□□□□□ -1.11
MIR3939-201ENST00000582614 GRIN2BQ13224 1484 aa8.12□□□□□ -1.11
MIR3939-201ENST00000582614 MAGI1Q96QZ7 1491 aaPredicted RBP8.12□□□□□ -1.11
MIR3939-201ENST00000582614 PBRM1Q86U86 1689 aa8.11□□□□□ -1.11
MIR3939-201ENST00000582614 ERCC6L2Q5T890 1561 aa8.1□□□□□ -1.11
MIR3939-201ENST00000582614 CUX1P39880 1505 aa8.1□□□□□ -1.11
MIR3939-201ENST00000582614 WDR97A6NE52 1622 aa8.09□□□□□ -1.11
MIR3939-201ENST00000582614 KIF13AQ9H1H9 1805 aa8.07□□□□□ -1.12
MIR3939-201ENST00000582614 CEP170Q5SW79 1584 aa8.04□□□□□ -1.12
MIR3939-201ENST00000582614 ABCA5Q8WWZ7 1642 aa8.03□□□□□ -1.12
MIR3939-201ENST00000582614 GRIN2AQ12879 1464 aa8.02□□□□□ -1.13
MIR3939-201ENST00000582614 ABCA10Q8WWZ4 1543 aa8□□□□□ -1.13
MIR3939-201ENST00000582614 ILDR1Q86SU0 546 aaPredicted RBP8□□□□□ -1.13
MIR3939-201ENST00000582614 FAM69CQ0P6D2 419 aa7.99□□□□□ -1.13
MIR3939-201ENST00000582614 SHROOM2Q13796 1616 aa7.99□□□□□ -1.13
MIR3939-201ENST00000582614 TSPOAP1O95153 1857 aa7.98□□□□□ -1.13
MIR3939-201ENST00000582614 ADAMTS12P58397 1594 aa7.98□□□□□ -1.13
MIR3939-201ENST00000582614 NUP160Q12769 1436 aa7.98□□□□□ -1.13
MIR3939-201ENST00000582614 KDM4FA0A1W2PPD8 638 aa7.98□□□□□ -1.13
MIR3939-201ENST00000582614 PRG4Q92954 1404 aaPredicted RBP7.97□□□□□ -1.13
MIR3939-201ENST00000582614 NPM1P06748 294 aaKnown RBP eCLIP7.96□□□□□ -1.14
MIR3939-201ENST00000582614 JPH4Q96JJ6 628 aa7.95□□□□□ -1.14
MIR3939-201ENST00000582614 FHAD1B1AJZ9 1412 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms