RNA–Protein interactions for RNA: ENST00000582604.1

SPECC1-219, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 3

Gene SPECC1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-219ENST00000582604 NISCHQ9Y2I1 1504 aa26.16■■□□□ 1.78
SPECC1-219ENST00000582604 CCDC180Q9P1Z9 1646 aa23.11■■□□□ 1.29
SPECC1-219ENST00000582604 ABCC9O60706 1549 aa22.4■■□□□ 1.18
SPECC1-219ENST00000582604 ZCCHC6Q5VYS8 1495 aaKnown RBP21.88■■□□□ 1.09
SPECC1-219ENST00000582604 DCAF1Q9Y4B6 1507 aa21.75■■□□□ 1.07
SPECC1-219ENST00000582604 DCAF8L2P0C7V8 631 aa21.71■■□□□ 1.07
SPECC1-219ENST00000582604 MYO15BQ96JP2 1530 aa21.7■■□□□ 1.06
SPECC1-219ENST00000582604 NACADO15069 1562 aa21.64■■□□□ 1.05
SPECC1-219ENST00000582604 RB1CC1Q8TDY2 1594 aa21.54■■□□□ 1.04
SPECC1-219ENST00000582604 SCRIBQ14160 1630 aa21.01■□□□□ 0.95
SPECC1-219ENST00000582604 PABPN1Q86U42 306 aaKnown RBP eCLIP20.98■□□□□ 0.95
SPECC1-219ENST00000582604 UNC13AQ9UPW8 1703 aa20.9■□□□□ 0.94
SPECC1-219ENST00000582604 SHROOM4Q9ULL8 1493 aa20.87■□□□□ 0.93
SPECC1-219ENST00000582604 BICRAQ9NZM4 1560 aa20.8■□□□□ 0.92
SPECC1-219ENST00000582604 DNAJC5BQ9UF47 199 aa20.52■□□□□ 0.88
SPECC1-219ENST00000582604 BAZ1AQ9NRL2 1556 aaPredicted RBP20.32■□□□□ 0.84
SPECC1-219ENST00000582604 EIF4G1Q04637 1599 aaKnown RBP20.31■□□□□ 0.84
SPECC1-219ENST00000582604 CECR2Q9BXF3 1484 aa20.21■□□□□ 0.83
SPECC1-219ENST00000582604 CC2D2AQ9P2K1 1620 aa20.2■□□□□ 0.82
SPECC1-219ENST00000582604 SMARCA4P51532 1647 aa20.18■□□□□ 0.82
SPECC1-219ENST00000582604 MROH2BQ7Z745 1585 aa20.09■□□□□ 0.81
SPECC1-219ENST00000582604 RSF1Q96T23 1441 aaPredicted RBP20.08■□□□□ 0.8
SPECC1-219ENST00000582604 SMARCA2P51531 1590 aa20.05■□□□□ 0.8
SPECC1-219ENST00000582604 PEG3Q9GZU2 1588 aa20.02■□□□□ 0.8
SPECC1-219ENST00000582604 SUPT5HO00267 1087 aaKnown RBP19.97■□□□□ 0.79
SPECC1-219ENST00000582604 ATAD2BQ9ULI0 1458 aa19.96■□□□□ 0.79
SPECC1-219ENST00000582604 NCAPD3P42695 1498 aa19.92■□□□□ 0.78
SPECC1-219ENST00000582604 WIZO95785 1651 aa19.91■□□□□ 0.78
SPECC1-219ENST00000582604 HMGXB3Q12766 1538 aa19.87■□□□□ 0.77
SPECC1-219ENST00000582604 BAZ1BQ9UIG0 1483 aaKnown RBP19.87■□□□□ 0.77
SPECC1-219ENST00000582604 TOP2AP11388 1531 aaKnown RBP19.81■□□□□ 0.76
SPECC1-219ENST00000582604 CCDC88BA6NC98 1476 aa19.53■□□□□ 0.72
SPECC1-219ENST00000582604 CADPSQ9ULU8 1353 aa19.37■□□□□ 0.69
SPECC1-219ENST00000582604 NESP48681 1621 aa19.36■□□□□ 0.69
SPECC1-219ENST00000582604 LAMC3Q9Y6N6 1575 aa19.36■□□□□ 0.69
SPECC1-219ENST00000582604 ERCC6Q03468 1493 aa19.35■□□□□ 0.69
SPECC1-219ENST00000582604 CFTRP13569 1480 aa19.33■□□□□ 0.68
SPECC1-219ENST00000582604 PRDM2Q13029 1718 aa19.27■□□□□ 0.68
SPECC1-219ENST00000582604 PDS5BQ9NTI5 1447 aa19.25■□□□□ 0.67
SPECC1-219ENST00000582604 FANCD2Q9BXW9 1451 aa19.12■□□□□ 0.65
SPECC1-219ENST00000582604 CEP164Q9UPV0 1460 aa19.09■□□□□ 0.65
SPECC1-219ENST00000582604 CUX2O14529 1486 aa19.09■□□□□ 0.65
SPECC1-219ENST00000582604 ABCC8Q09428 1581 aa19.06■□□□□ 0.64
SPECC1-219ENST00000582604 KIF21AQ7Z4S6 1674 aa19.05■□□□□ 0.64
SPECC1-219ENST00000582604 MRC2Q9UBG0 1479 aa19.02■□□□□ 0.63
SPECC1-219ENST00000582604 THOC2Q8NI27 1593 aaKnown RBP19.01■□□□□ 0.63
SPECC1-219ENST00000582604 WRNQ14191 1432 aaPredicted RBP eCLIP19■□□□□ 0.63
SPECC1-219ENST00000582604 TRIM41Q8WV44 630 aa18.95■□□□□ 0.62
SPECC1-219ENST00000582604 WDR62O43379 1518 aa18.91■□□□□ 0.62
SPECC1-219ENST00000582604 CHIC1Q5VXU3 224 aa18.91■□□□□ 0.62
SPECC1-219ENST00000582604 DNMBPQ6XZF7 1577 aa18.9■□□□□ 0.62
SPECC1-219ENST00000582604 TOP2BQ02880 1626 aa18.88■□□□□ 0.61
SPECC1-219ENST00000582604 BIVM-ERCC5R4GMW8 1640 aa18.86■□□□□ 0.61
SPECC1-219ENST00000582604 URB2Q14146 1524 aaKnown RBP18.84■□□□□ 0.61
SPECC1-219ENST00000582604 TOPBP1Q92547 1522 aa18.84■□□□□ 0.61
SPECC1-219ENST00000582604 CUX1P39880 1505 aa18.84■□□□□ 0.61
SPECC1-219ENST00000582604 SYNJ1O43426 1573 aa18.81■□□□□ 0.6
SPECC1-219ENST00000582604 FGD5Q6ZNL6 1462 aa18.74■□□□□ 0.59
SPECC1-219ENST00000582604 SOGA1O94964 1423 aa18.71■□□□□ 0.59
SPECC1-219ENST00000582604 POLA1P09884 1462 aaPredicted RBP18.71■□□□□ 0.59
SPECC1-219ENST00000582604 IFT140Q96RY7 1462 aa18.69■□□□□ 0.58
SPECC1-219ENST00000582604 EEA1Q15075 1411 aa18.66■□□□□ 0.58
SPECC1-219ENST00000582604 WDR97A6NE52 1622 aa18.63■□□□□ 0.57
SPECC1-219ENST00000582604 ABCA10Q8WWZ4 1543 aa18.63■□□□□ 0.57
SPECC1-219ENST00000582604 KIF27Q86VH2 1401 aa18.62■□□□□ 0.57
SPECC1-219ENST00000582604 RAD54L2Q9Y4B4 1467 aa18.57■□□□□ 0.56
SPECC1-219ENST00000582604 TARBP1Q13395 1621 aaKnown RBP18.56■□□□□ 0.56
SPECC1-219ENST00000582604 ZNF608Q9ULD9 1512 aaPredicted RBP18.54■□□□□ 0.56
SPECC1-219ENST00000582604 DNAJC5Q9H3Z4 198 aa18.5■□□□□ 0.55
SPECC1-219ENST00000582604 GAPVD1Q14C86 1478 aa18.49■□□□□ 0.55
SPECC1-219ENST00000582604 AQRO60306 1485 aaKnown RBP eCLIP18.47■□□□□ 0.55
SPECC1-219ENST00000582604 TDRD9Q8NDG6 1382 aaKnown RBP18.47■□□□□ 0.55
SPECC1-219ENST00000582604 CSRNP3Q8WYN3 585 aa18.47■□□□□ 0.55
SPECC1-219ENST00000582604 ABCA5Q8WWZ7 1642 aa18.45■□□□□ 0.54
SPECC1-219ENST00000582604 ERICH3Q5RHP9 1530 aa18.45■□□□□ 0.54
SPECC1-219ENST00000582604 GRIN2BQ13224 1484 aa18.45■□□□□ 0.54
SPECC1-219ENST00000582604 EIF4G3O43432 1585 aaKnown RBP18.44■□□□□ 0.54
SPECC1-219ENST00000582604 FAM9AQ8IZU1 332 aaPredicted RBP18.41■□□□□ 0.54
SPECC1-219ENST00000582604 CUL7Q14999 1698 aa18.4■□□□□ 0.54
SPECC1-219ENST00000582604 PBRM1Q86U86 1689 aa18.38■□□□□ 0.53
SPECC1-219ENST00000582604 IGF1RP08069 1367 aa18.38■□□□□ 0.53
SPECC1-219ENST00000582604 OSCARQ8IYS5 282 aa18.37■□□□□ 0.53
SPECC1-219ENST00000582604 RUSC2Q8N2Y8 1516 aa18.37■□□□□ 0.53
SPECC1-219ENST00000582604 MAGI1Q96QZ7 1491 aaPredicted RBP18.36■□□□□ 0.53
SPECC1-219ENST00000582604 CARMIL1Q5VZK9 1371 aa18.34■□□□□ 0.53
SPECC1-219ENST00000582604 FBLN2P98095 1184 aa18.34■□□□□ 0.53
SPECC1-219ENST00000582604 FHAD1B1AJZ9 1412 aa18.32■□□□□ 0.52
SPECC1-219ENST00000582604 KIF21BO75037 1637 aa18.31■□□□□ 0.52
SPECC1-219ENST00000582604 RAPGEF2Q9Y4G8 1499 aa18.3■□□□□ 0.52
SPECC1-219ENST00000582604 SNAPC4Q5SXM2 1469 aa18.29■□□□□ 0.52
SPECC1-219ENST00000582604 PRXQ9BXM0 1461 aa18.29■□□□□ 0.52
SPECC1-219ENST00000582604 CHMP7Q8WUX9 453 aaPredicted RBP18.27■□□□□ 0.52
SPECC1-219ENST00000582604 GOLGA3Q08378 1498 aa18.26■□□□□ 0.51
SPECC1-219ENST00000582604 SYNJ2O15056 1496 aa18.26■□□□□ 0.51
SPECC1-219ENST00000582604 ADAMTS12P58397 1594 aa18.25■□□□□ 0.51
SPECC1-219ENST00000582604 UBTFP17480 764 aaKnown RBP18.21■□□□□ 0.51
SPECC1-219ENST00000582604 GRIN2AQ12879 1464 aa18.17■□□□□ 0.5
SPECC1-219ENST00000582604 CHD1O14646 1710 aa18.15■□□□□ 0.5
SPECC1-219ENST00000582604 TNIKQ9UKE5 1360 aa18.12■□□□□ 0.49
SPECC1-219ENST00000582604 CTTNBP2Q8WZ74 1663 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms