RNA–Protein interactions for RNA: ENST00000582520.1

ARHGDIA-210, Transcript of Rho GDP dissociation inhibitor alpha, humanhuman

TSL 3

Gene ARHGDIA, Length 245 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGDIA-210ENST00000582520 NISCHQ9Y2I1 1504 aa23.49■■□□□ 1.35
ARHGDIA-210ENST00000582520 ABCC9O60706 1549 aa21.58■■□□□ 1.04
ARHGDIA-210ENST00000582520 CCDC180Q9P1Z9 1646 aa21.19■□□□□ 0.98
ARHGDIA-210ENST00000582520 DNAJC5BQ9UF47 199 aa20.49■□□□□ 0.87
ARHGDIA-210ENST00000582520 RB1CC1Q8TDY2 1594 aa20.38■□□□□ 0.85
ARHGDIA-210ENST00000582520 DCAF8L2P0C7V8 631 aa20.16■□□□□ 0.82
ARHGDIA-210ENST00000582520 NACADO15069 1562 aa20.15■□□□□ 0.82
ARHGDIA-210ENST00000582520 PABPN1Q86U42 306 aaKnown RBP eCLIP20.08■□□□□ 0.81
ARHGDIA-210ENST00000582520 UNC13AQ9UPW8 1703 aa19.82■□□□□ 0.76
ARHGDIA-210ENST00000582520 MYO15BQ96JP2 1530 aa19.73■□□□□ 0.75
ARHGDIA-210ENST00000582520 BICRAQ9NZM4 1560 aa19.71■□□□□ 0.75
ARHGDIA-210ENST00000582520 CECR2Q9BXF3 1484 aa19.48■□□□□ 0.71
ARHGDIA-210ENST00000582520 SHROOM4Q9ULL8 1493 aa19.47■□□□□ 0.71
ARHGDIA-210ENST00000582520 CC2D2AQ9P2K1 1620 aa19.43■□□□□ 0.7
ARHGDIA-210ENST00000582520 ZCCHC6Q5VYS8 1495 aaKnown RBP19.38■□□□□ 0.69
ARHGDIA-210ENST00000582520 DCAF1Q9Y4B6 1507 aa19.35■□□□□ 0.69
ARHGDIA-210ENST00000582520 SCRIBQ14160 1630 aa19.33■□□□□ 0.69
ARHGDIA-210ENST00000582520 EIF4G1Q04637 1599 aaKnown RBP19.31■□□□□ 0.68
ARHGDIA-210ENST00000582520 DNAJC5Q9H3Z4 198 aa19.1■□□□□ 0.65
ARHGDIA-210ENST00000582520 CUX2O14529 1486 aa18.71■□□□□ 0.59
ARHGDIA-210ENST00000582520 ERCC6Q03468 1493 aa18.71■□□□□ 0.59
ARHGDIA-210ENST00000582520 NCAPD3P42695 1498 aa18.6■□□□□ 0.57
ARHGDIA-210ENST00000582520 ATAD2BQ9ULI0 1458 aa18.5■□□□□ 0.55
ARHGDIA-210ENST00000582520 SMARCA2P51531 1590 aa18.45■□□□□ 0.54
ARHGDIA-210ENST00000582520 NESP48681 1621 aa18.41■□□□□ 0.54
ARHGDIA-210ENST00000582520 HMGXB3Q12766 1538 aa18.41■□□□□ 0.54
ARHGDIA-210ENST00000582520 SMARCA4P51532 1647 aa18.38■□□□□ 0.53
ARHGDIA-210ENST00000582520 BAZ1BQ9UIG0 1483 aaKnown RBP18.34■□□□□ 0.53
ARHGDIA-210ENST00000582520 BAZ1AQ9NRL2 1556 aaPredicted RBP18.28■□□□□ 0.52
ARHGDIA-210ENST00000582520 THOC2Q8NI27 1593 aaKnown RBP18.24■□□□□ 0.51
ARHGDIA-210ENST00000582520 LAMC3Q9Y6N6 1575 aa18.24■□□□□ 0.51
ARHGDIA-210ENST00000582520 TRIM41Q8WV44 630 aa18.21■□□□□ 0.51
ARHGDIA-210ENST00000582520 PDS5BQ9NTI5 1447 aa18.2■□□□□ 0.5
ARHGDIA-210ENST00000582520 PEG3Q9GZU2 1588 aa18.17■□□□□ 0.5
ARHGDIA-210ENST00000582520 KIF21AQ7Z4S6 1674 aa18.13■□□□□ 0.49
ARHGDIA-210ENST00000582520 MROH2BQ7Z745 1585 aa18.09■□□□□ 0.49
ARHGDIA-210ENST00000582520 CADPSQ9ULU8 1353 aa18.05■□□□□ 0.48
ARHGDIA-210ENST00000582520 MRC2Q9UBG0 1479 aa18.02■□□□□ 0.48
ARHGDIA-210ENST00000582520 WDR62O43379 1518 aa17.95■□□□□ 0.46
ARHGDIA-210ENST00000582520 CEP164Q9UPV0 1460 aa17.91■□□□□ 0.46
ARHGDIA-210ENST00000582520 OSCARQ8IYS5 282 aa17.9■□□□□ 0.46
ARHGDIA-210ENST00000582520 WIZO95785 1651 aa17.86■□□□□ 0.45
ARHGDIA-210ENST00000582520 FANCD2Q9BXW9 1451 aa17.85■□□□□ 0.45
ARHGDIA-210ENST00000582520 CFTRP13569 1480 aa17.75■□□□□ 0.43
ARHGDIA-210ENST00000582520 URB2Q14146 1524 aaKnown RBP17.68■□□□□ 0.42
ARHGDIA-210ENST00000582520 RSF1Q96T23 1441 aaPredicted RBP17.62■□□□□ 0.41
ARHGDIA-210ENST00000582520 TOP2AP11388 1531 aaKnown RBP17.62■□□□□ 0.41
ARHGDIA-210ENST00000582520 RIMBP3CA6NJZ7 1639 aa17.58■□□□□ 0.41
ARHGDIA-210ENST00000582520 RIMBP3BA6NNM3 1639 aa17.58■□□□□ 0.41
ARHGDIA-210ENST00000582520 RIMBP3Q9UFD9 1639 aa17.58■□□□□ 0.41
ARHGDIA-210ENST00000582520 IFT140Q96RY7 1462 aa17.56■□□□□ 0.4
ARHGDIA-210ENST00000582520 ZNF608Q9ULD9 1512 aaPredicted RBP17.52■□□□□ 0.4
ARHGDIA-210ENST00000582520 ARHGEF11O15085 1522 aa17.52■□□□□ 0.39
ARHGDIA-210ENST00000582520 CYB5RLQ6IPT4 315 aa17.5■□□□□ 0.39
ARHGDIA-210ENST00000582520 PRDM2Q13029 1718 aa17.5■□□□□ 0.39
ARHGDIA-210ENST00000582520 TRHP20396 242 aaPredicted RBP17.46■□□□□ 0.39
ARHGDIA-210ENST00000582520 TOPBP1Q92547 1522 aa17.46■□□□□ 0.39
ARHGDIA-210ENST00000582520 ABCC8Q09428 1581 aa17.44■□□□□ 0.38
ARHGDIA-210ENST00000582520 CCDC88BA6NC98 1476 aa17.44■□□□□ 0.38
ARHGDIA-210ENST00000582520 FBLN2P98095 1184 aa17.43■□□□□ 0.38
ARHGDIA-210ENST00000582520 EIF4G3O43432 1585 aaKnown RBP17.4■□□□□ 0.38
ARHGDIA-210ENST00000582520 AQRO60306 1485 aaKnown RBP eCLIP17.37■□□□□ 0.37
ARHGDIA-210ENST00000582520 DNMBPQ6XZF7 1577 aa17.36■□□□□ 0.37
ARHGDIA-210ENST00000582520 CHD1O14646 1710 aa17.33■□□□□ 0.36
ARHGDIA-210ENST00000582520 ARAP1Q96P48 1450 aa17.31■□□□□ 0.36
ARHGDIA-210ENST00000582520 TARBP1Q13395 1621 aaKnown RBP17.28■□□□□ 0.36
ARHGDIA-210ENST00000582520 POLA1P09884 1462 aaPredicted RBP17.25■□□□□ 0.35
ARHGDIA-210ENST00000582520 TDRD9Q8NDG6 1382 aaKnown RBP17.23■□□□□ 0.35
ARHGDIA-210ENST00000582520 SOGA1O94964 1423 aa17.22■□□□□ 0.35
ARHGDIA-210ENST00000582520 AEBP2Q6ZN18 517 aaPredicted RBP17.22■□□□□ 0.35
ARHGDIA-210ENST00000582520 CHMP7Q8WUX9 453 aaPredicted RBP17.22■□□□□ 0.35
ARHGDIA-210ENST00000582520 RAD54L2Q9Y4B4 1467 aa17.21■□□□□ 0.35
ARHGDIA-210ENST00000582520 SNAPC4Q5SXM2 1469 aa17.17■□□□□ 0.34
ARHGDIA-210ENST00000582520 SYNJ1O43426 1573 aa17.14■□□□□ 0.33
ARHGDIA-210ENST00000582520 FGD5Q6ZNL6 1462 aa17.12■□□□□ 0.33
ARHGDIA-210ENST00000582520 MAGI1Q96QZ7 1491 aaPredicted RBP17.11■□□□□ 0.33
ARHGDIA-210ENST00000582520 CLASP1Q7Z460 1538 aa17.11■□□□□ 0.33
ARHGDIA-210ENST00000582520 WDR97A6NE52 1622 aa17.1■□□□□ 0.33
ARHGDIA-210ENST00000582520 GRIN2BQ13224 1484 aa17.09■□□□□ 0.33
ARHGDIA-210ENST00000582520 SYNJ2O15056 1496 aa17.05■□□□□ 0.32
ARHGDIA-210ENST00000582520 CUX1P39880 1505 aa17.01■□□□□ 0.31
ARHGDIA-210ENST00000582520 GAPVD1Q14C86 1478 aa17.01■□□□□ 0.31
ARHGDIA-210ENST00000582520 PBRM1Q86U86 1689 aa16.94■□□□□ 0.3
ARHGDIA-210ENST00000582520 ABCA10Q8WWZ4 1543 aa16.88■□□□□ 0.29
ARHGDIA-210ENST00000582520 ABCA5Q8WWZ7 1642 aa16.85■□□□□ 0.29
ARHGDIA-210ENST00000582520 GRIN2AQ12879 1464 aa16.85■□□□□ 0.29
ARHGDIA-210ENST00000582520 ERCC6L2Q5T890 1561 aa16.82■□□□□ 0.28
ARHGDIA-210ENST00000582520 WRNQ14191 1432 aaPredicted RBP eCLIP16.81■□□□□ 0.28
ARHGDIA-210ENST00000582520 CEP170Q5SW79 1584 aa16.8■□□□□ 0.28
ARHGDIA-210ENST00000582520 NUP160Q12769 1436 aa16.79■□□□□ 0.28
ARHGDIA-210ENST00000582520 ADAMTS12P58397 1594 aa16.77■□□□□ 0.27
ARHGDIA-210ENST00000582520 FHAD1B1AJZ9 1412 aa16.76■□□□□ 0.27
ARHGDIA-210ENST00000582520 SUPT5HO00267 1087 aaKnown RBP16.74■□□□□ 0.27
ARHGDIA-210ENST00000582520 NPM1P06748 294 aaKnown RBP eCLIP16.72■□□□□ 0.27
ARHGDIA-210ENST00000582520 SHROOM2Q13796 1616 aa16.71■□□□□ 0.27
ARHGDIA-210ENST00000582520 PRG4Q92954 1404 aaPredicted RBP16.7■□□□□ 0.26
ARHGDIA-210ENST00000582520 JPH4Q96JJ6 628 aa16.7■□□□□ 0.26
ARHGDIA-210ENST00000582520 FAM69CQ0P6D2 419 aa16.68■□□□□ 0.26
ARHGDIA-210ENST00000582520 ERICH3Q5RHP9 1530 aa16.67■□□□□ 0.26
ARHGDIA-210ENST00000582520 KIF13AQ9H1H9 1805 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms