RNA–Protein interactions for RNA: ENST00000582402.1

CDC6-205, Transcript of cell division cycle 6, humanhuman

TSL 3

Gene CDC6, Length 353 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6-205ENST00000582402 DNAJC5BQ9UF47 199 aa11.39□□□□□ -0.59
CDC6-205ENST00000582402 ABCC9O60706 1549 aa11.38□□□□□ -0.59
CDC6-205ENST00000582402 NISCHQ9Y2I1 1504 aa11.18□□□□□ -0.62
CDC6-205ENST00000582402 DNAJC5Q9H3Z4 198 aa10.94□□□□□ -0.66
CDC6-205ENST00000582402 PABPN1Q86U42 306 aaKnown RBP eCLIP10.44□□□□□ -0.74
CDC6-205ENST00000582402 CCDC180Q9P1Z9 1646 aa10.43□□□□□ -0.74
CDC6-205ENST00000582402 RB1CC1Q8TDY2 1594 aa10.33□□□□□ -0.76
CDC6-205ENST00000582402 TRIM41Q8WV44 630 aa10.32□□□□□ -0.76
CDC6-205ENST00000582402 UNC13AQ9UPW8 1703 aa10.28□□□□□ -0.76
CDC6-205ENST00000582402 CECR2Q9BXF3 1484 aa10.26□□□□□ -0.77
CDC6-205ENST00000582402 CC2D2AQ9P2K1 1620 aa10.21□□□□□ -0.78
CDC6-205ENST00000582402 BICRAQ9NZM4 1560 aa10.13□□□□□ -0.79
CDC6-205ENST00000582402 CUX2O14529 1486 aa9.99□□□□□ -0.81
CDC6-205ENST00000582402 NACADO15069 1562 aa9.99□□□□□ -0.81
CDC6-205ENST00000582402 DCAF8L2P0C7V8 631 aa9.94□□□□□ -0.82
CDC6-205ENST00000582402 EIF4G1Q04637 1599 aaKnown RBP9.93□□□□□ -0.82
CDC6-205ENST00000582402 AEBP2Q6ZN18 517 aaPredicted RBP9.86□□□□□ -0.83
CDC6-205ENST00000582402 ERCC6Q03468 1493 aa9.84□□□□□ -0.83
CDC6-205ENST00000582402 SHROOM4Q9ULL8 1493 aa9.66□□□□□ -0.86
CDC6-205ENST00000582402 ILDR1Q86SU0 546 aaPredicted RBP9.65□□□□□ -0.86
CDC6-205ENST00000582402 SCRIBQ14160 1630 aa9.61□□□□□ -0.87
CDC6-205ENST00000582402 THOC2Q8NI27 1593 aaKnown RBP9.59□□□□□ -0.87
CDC6-205ENST00000582402 NESP48681 1621 aa9.55□□□□□ -0.88
CDC6-205ENST00000582402 TRHP20396 242 aaPredicted RBP9.54□□□□□ -0.88
CDC6-205ENST00000582402 BAZ1AQ9NRL2 1556 aaPredicted RBP9.53□□□□□ -0.88
CDC6-205ENST00000582402 RIMBP3CA6NJZ7 1639 aa9.53□□□□□ -0.88
CDC6-205ENST00000582402 RIMBP3BA6NNM3 1639 aa9.53□□□□□ -0.88
CDC6-205ENST00000582402 RIMBP3Q9UFD9 1639 aa9.53□□□□□ -0.88
CDC6-205ENST00000582402 SMARCA2P51531 1590 aa9.52□□□□□ -0.89
CDC6-205ENST00000582402 MYO15BQ96JP2 1530 aa9.44□□□□□ -0.9
CDC6-205ENST00000582402 KIF21AQ7Z4S6 1674 aa9.44□□□□□ -0.9
CDC6-205ENST00000582402 OSCARQ8IYS5 282 aa9.37□□□□□ -0.91
CDC6-205ENST00000582402 ARHGEF11O15085 1522 aa9.35□□□□□ -0.91
CDC6-205ENST00000582402 CYB5RLQ6IPT4 315 aa9.32□□□□□ -0.92
CDC6-205ENST00000582402 ARAP1Q96P48 1450 aa9.21□□□□□ -0.93
CDC6-205ENST00000582402 LAMC3Q9Y6N6 1575 aa9.2□□□□□ -0.94
CDC6-205ENST00000582402 NCAPD3P42695 1498 aa9.2□□□□□ -0.94
CDC6-205ENST00000582402 WDR62O43379 1518 aa9.18□□□□□ -0.94
CDC6-205ENST00000582402 MRC2Q9UBG0 1479 aa9.17□□□□□ -0.94
CDC6-205ENST00000582402 ATAD2BQ9ULI0 1458 aa9.13□□□□□ -0.95
CDC6-205ENST00000582402 PDS5BQ9NTI5 1447 aa9.13□□□□□ -0.95
CDC6-205ENST00000582402 HMGXB3Q12766 1538 aa9.1□□□□□ -0.95
CDC6-205ENST00000582402 ZCCHC6Q5VYS8 1495 aaKnown RBP9.09□□□□□ -0.95
CDC6-205ENST00000582402 LMTK3Q96Q04 1460 aa9.09□□□□□ -0.95
CDC6-205ENST00000582402 DCAF1Q9Y4B6 1507 aa9.05□□□□□ -0.96
CDC6-205ENST00000582402 CHD1O14646 1710 aa9.05□□□□□ -0.96
CDC6-205ENST00000582402 BAZ1BQ9UIG0 1483 aaKnown RBP9.03□□□□□ -0.96
CDC6-205ENST00000582402 KDM4FA0A1W2PPD8 638 aa9.02□□□□□ -0.97
CDC6-205ENST00000582402 ILDR2Q71H61 639 aa9.02□□□□□ -0.97
CDC6-205ENST00000582402 SMARCA4P51532 1647 aa9.01□□□□□ -0.97
CDC6-205ENST00000582402 HECW2Q9P2P5 1572 aa8.99□□□□□ -0.97
CDC6-205ENST00000582402 CEP164Q9UPV0 1460 aa8.98□□□□□ -0.97
CDC6-205ENST00000582402 SOCS7O14512 581 aa8.98□□□□□ -0.97
CDC6-205ENST00000582402 ERCC6L2Q5T890 1561 aa8.98□□□□□ -0.97
CDC6-205ENST00000582402 ZNF608Q9ULD9 1512 aaPredicted RBP8.97□□□□□ -0.97
CDC6-205ENST00000582402 FBXO41Q8TF61 875 aa8.95□□□□□ -0.98
CDC6-205ENST00000582402 URB2Q14146 1524 aaKnown RBP8.91□□□□□ -0.98
CDC6-205ENST00000582402 EIF4G3O43432 1585 aaKnown RBP8.9□□□□□ -0.98
CDC6-205ENST00000582402 RSF1Q96T23 1441 aaPredicted RBP8.9□□□□□ -0.98
CDC6-205ENST00000582402 CADPSQ9ULU8 1353 aa8.9□□□□□ -0.98
CDC6-205ENST00000582402 FANCD2Q9BXW9 1451 aa8.89□□□□□ -0.99
CDC6-205ENST00000582402 KIF13AQ9H1H9 1805 aa8.89□□□□□ -0.99
CDC6-205ENST00000582402 FBLN2P98095 1184 aa8.89□□□□□ -0.99
CDC6-205ENST00000582402 DISP3Q9P2K9 1392 aa8.88□□□□□ -0.99
CDC6-205ENST00000582402 SYNJ2O15056 1496 aa8.81□□□□□ -1
CDC6-205ENST00000582402 KDM6BO15054 1643 aa8.8□□□□□ -1
CDC6-205ENST00000582402 CLASP1Q7Z460 1538 aa8.8□□□□□ -1
CDC6-205ENST00000582402 ADGRL1O94910 1474 aa8.79□□□□□ -1
CDC6-205ENST00000582402 PEG3Q9GZU2 1588 aa8.78□□□□□ -1
CDC6-205ENST00000582402 GAPVD1Q14C86 1478 aa8.77□□□□□ -1
CDC6-205ENST00000582402 IFT140Q96RY7 1462 aa8.77□□□□□ -1
CDC6-205ENST00000582402 SPATA31D1Q6ZQQ2 1576 aa8.75□□□□□ -1.01
CDC6-205ENST00000582402 AQRO60306 1485 aaKnown RBP eCLIP8.75□□□□□ -1.013e-7■■■□□ 18.8
CDC6-205ENST00000582402 TSPOAP1O95153 1857 aa8.74□□□□□ -1.01
CDC6-205ENST00000582402 SYNJ1O43426 1573 aa8.7□□□□□ -1.02
CDC6-205ENST00000582402 MROH2BQ7Z745 1585 aa8.69□□□□□ -1.02
CDC6-205ENST00000582402 SNAPC4Q5SXM2 1469 aa8.65□□□□□ -1.02
CDC6-205ENST00000582402 FAM69CQ0P6D2 419 aa8.64□□□□□ -1.03
CDC6-205ENST00000582402 TARBP1Q13395 1621 aaKnown RBP8.64□□□□□ -1.03
CDC6-205ENST00000582402 TOPBP1Q92547 1522 aa8.64□□□□□ -1.03
CDC6-205ENST00000582402 CFTRP13569 1480 aa8.64□□□□□ -1.03
CDC6-205ENST00000582402 PRDM2Q13029 1718 aa8.63□□□□□ -1.03
CDC6-205ENST00000582402 DIP2BQ9P265 1576 aa8.62□□□□□ -1.03
CDC6-205ENST00000582402 WIZO95785 1651 aa8.62□□□□□ -1.03
CDC6-205ENST00000582402 CHMP7Q8WUX9 453 aaPredicted RBP8.58□□□□□ -1.04
CDC6-205ENST00000582402 ABCC10Q5T3U5 1492 aa8.57□□□□□ -1.04
CDC6-205ENST00000582402 TDRD9Q8NDG6 1382 aaKnown RBP8.55□□□□□ -1.04
CDC6-205ENST00000582402 RAD54L2Q9Y4B4 1467 aa8.54□□□□□ -1.04
CDC6-205ENST00000582402 DNMBPQ6XZF7 1577 aa8.52□□□□□ -1.04
CDC6-205ENST00000582402 CEP170Q5SW79 1584 aa8.52□□□□□ -1.05
CDC6-205ENST00000582402 POLA1P09884 1462 aaPredicted RBP8.49□□□□□ -1.05
CDC6-205ENST00000582402 PPRC1Q5VV67 1664 aaKnown RBP8.49□□□□□ -1.05
CDC6-205ENST00000582402 PBRM1Q86U86 1689 aa8.49□□□□□ -1.05
CDC6-205ENST00000582402 CERKQ8TCT0 537 aa8.48□□□□□ -1.05
CDC6-205ENST00000582402 MAGI1Q96QZ7 1491 aaPredicted RBP8.48□□□□□ -1.05
CDC6-205ENST00000582402 TOP2BQ02880 1626 aa8.47□□□□□ -1.05
CDC6-205ENST00000582402 MAPKBP1O60336 1514 aa8.46□□□□□ -1.05
CDC6-205ENST00000582402 KIF21BO75037 1637 aa8.44□□□□□ -1.06
CDC6-205ENST00000582402 ADCY10Q96PN6 1610 aa8.43□□□□□ -1.06
CDC6-205ENST00000582402 COL17A1Q9UMD9 1497 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms