RNA–Protein interactions for RNA: ENST00000582357.5

NCOR1-221, Transcript of nuclear receptor corepressor 1, humanhuman

TSL 1 (best)

Gene NCOR1, Length 1,877 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOR1-221ENST00000582357 NISCHQ9Y2I1 1504 aa45.84■■■■■ 4.93
NCOR1-221ENST00000582357 CCDC180Q9P1Z9 1646 aa40.14■■■■■ 4.02
NCOR1-221ENST00000582357 ABCC9O60706 1549 aa38.62■■■■□ 3.77
NCOR1-221ENST00000582357 ZCCHC6Q5VYS8 1495 aaKnown RBP38.38■■■■□ 3.73
NCOR1-221ENST00000582357 DCAF8L2P0C7V8 631 aa38.14■■■■□ 3.7
NCOR1-221ENST00000582357 DCAF1Q9Y4B6 1507 aa37.84■■■■□ 3.65
NCOR1-221ENST00000582357 MYO15BQ96JP2 1530 aa37.6■■■■□ 3.61
NCOR1-221ENST00000582357 NACADO15069 1562 aa37.55■■■■□ 3.6
NCOR1-221ENST00000582357 RB1CC1Q8TDY2 1594 aa37.38■■■■□ 3.57
NCOR1-221ENST00000582357 SHROOM4Q9ULL8 1493 aa37.09■■■■□ 3.53
NCOR1-221ENST00000582357 SCRIBQ14160 1630 aa36.94■■■■□ 3.5
NCOR1-221ENST00000582357 UNC13AQ9UPW8 1703 aa36.61■■■■□ 3.45
NCOR1-221ENST00000582357 PABPN1Q86U42 306 aaKnown RBP eCLIP36.37■■■■□ 3.41
NCOR1-221ENST00000582357 BICRAQ9NZM4 1560 aa36.33■■■■□ 3.41
NCOR1-221ENST00000582357 CECR2Q9BXF3 1484 aa35.74■■■■□ 3.31
NCOR1-221ENST00000582357 SUPT5HO00267 1087 aaKnown RBP35.54■■■■□ 3.28
NCOR1-221ENST00000582357 MROH2BQ7Z745 1585 aa35.43■■■■□ 3.26
NCOR1-221ENST00000582357 BAZ1AQ9NRL2 1556 aaPredicted RBP35.4■■■■□ 3.26
NCOR1-221ENST00000582357 RSF1Q96T23 1441 aaPredicted RBP35.38■■■■□ 3.25
NCOR1-221ENST00000582357 SMARCA4P51532 1647 aa35.34■■■■□ 3.25
NCOR1-221ENST00000582357 EIF4G1Q04637 1599 aaKnown RBP35.26■■■■□ 3.24
NCOR1-221ENST00000582357 WIZO95785 1651 aa35.09■■■■□ 3.21
NCOR1-221ENST00000582357 ATAD2BQ9ULI0 1458 aa34.94■■■■□ 3.18
NCOR1-221ENST00000582357 PEG3Q9GZU2 1588 aa34.91■■■■□ 3.18
NCOR1-221ENST00000582357 CC2D2AQ9P2K1 1620 aa34.89■■■■□ 3.18
NCOR1-221ENST00000582357 SMARCA2P51531 1590 aa34.83■■■■□ 3.17
NCOR1-221ENST00000582357 NCAPD3P42695 1498 aa34.72■■■■□ 3.15
NCOR1-221ENST00000582357 DNAJC5BQ9UF47 199 aa34.69■■■■□ 3.14
NCOR1-221ENST00000582357 BAZ1BQ9UIG0 1483 aaKnown RBP34.69■■■■□ 3.14
NCOR1-221ENST00000582357 TOP2AP11388 1531 aaKnown RBP34.66■■■■□ 3.14
NCOR1-221ENST00000582357 HMGXB3Q12766 1538 aa34.58■■■■□ 3.13
NCOR1-221ENST00000582357 CCDC88BA6NC98 1476 aa34.36■■■■□ 3.09
NCOR1-221ENST00000582357 CHIC1Q5VXU3 224 aa34.25■■■■□ 3.07
NCOR1-221ENST00000582357 CADPSQ9ULU8 1353 aa33.8■■■■□ 3
NCOR1-221ENST00000582357 CFTRP13569 1480 aa33.8■■■■□ 3
NCOR1-221ENST00000582357 NESP48681 1621 aa33.75■■■□□ 2.99
NCOR1-221ENST00000582357 LAMC3Q9Y6N6 1575 aa33.58■■■□□ 2.97
NCOR1-221ENST00000582357 ABCC8Q09428 1581 aa33.47■■■□□ 2.95
NCOR1-221ENST00000582357 PRDM2Q13029 1718 aa33.45■■■□□ 2.95
NCOR1-221ENST00000582357 FANCD2Q9BXW9 1451 aa33.43■■■□□ 2.94
NCOR1-221ENST00000582357 PDS5BQ9NTI5 1447 aa33.37■■■□□ 2.93
NCOR1-221ENST00000582357 TRIM41Q8WV44 630 aa33.35■■■□□ 2.93
NCOR1-221ENST00000582357 WRNQ14191 1432 aaPredicted RBP eCLIP33.29■■■□□ 2.92
NCOR1-221ENST00000582357 KIF21AQ7Z4S6 1674 aa33.25■■■□□ 2.91
NCOR1-221ENST00000582357 CEP164Q9UPV0 1460 aa33.25■■■□□ 2.91
NCOR1-221ENST00000582357 SYNJ1O43426 1573 aa33.19■■■□□ 2.9
NCOR1-221ENST00000582357 CUX1P39880 1505 aa33.16■■■□□ 2.9
NCOR1-221ENST00000582357 ERCC6Q03468 1493 aa33.12■■■□□ 2.89
NCOR1-221ENST00000582357 URB2Q14146 1524 aaKnown RBP33.07■■■□□ 2.88
NCOR1-221ENST00000582357 TOP2BQ02880 1626 aa33.05■■■□□ 2.88
NCOR1-221ENST00000582357 BIVM-ERCC5R4GMW8 1640 aa33■■■□□ 2.87
NCOR1-221ENST00000582357 TOPBP1Q92547 1522 aa33■■■□□ 2.87
NCOR1-221ENST00000582357 MRC2Q9UBG0 1479 aa32.98■■■□□ 2.87
NCOR1-221ENST00000582357 DNMBPQ6XZF7 1577 aa32.97■■■□□ 2.87
NCOR1-221ENST00000582357 LOC105371045A0A1W2PR82 267 aa32.97■■■□□ 2.87
NCOR1-221ENST00000582357 FGD5Q6ZNL6 1462 aa32.87■■■□□ 2.85
NCOR1-221ENST00000582357 THOC2Q8NI27 1593 aaKnown RBP32.86■■■□□ 2.85
NCOR1-221ENST00000582357 WDR62O43379 1518 aa32.83■■■□□ 2.85
NCOR1-221ENST00000582357 POLA1P09884 1462 aaPredicted RBP32.8■■■□□ 2.84
NCOR1-221ENST00000582357 FAM9AQ8IZU1 332 aaPredicted RBP32.8■■■□□ 2.84
NCOR1-221ENST00000582357 SOGA1O94964 1423 aa32.75■■■□□ 2.83
NCOR1-221ENST00000582357 RAD54L2Q9Y4B4 1467 aa32.73■■■□□ 2.83
NCOR1-221ENST00000582357 RUSC2Q8N2Y8 1516 aa32.68■■■□□ 2.82
NCOR1-221ENST00000582357 CUX2O14529 1486 aa32.65■■■□□ 2.82
NCOR1-221ENST00000582357 ABCA10Q8WWZ4 1543 aa32.54■■■□□ 2.8
NCOR1-221ENST00000582357 TARBP1Q13395 1621 aaKnown RBP32.54■■■□□ 2.8
NCOR1-221ENST00000582357 TDRD9Q8NDG6 1382 aaKnown RBP32.48■■■□□ 2.79
NCOR1-221ENST00000582357 KIF27Q86VH2 1401 aa32.48■■■□□ 2.79
NCOR1-221ENST00000582357 IFT140Q96RY7 1462 aa32.48■■■□□ 2.79
NCOR1-221ENST00000582357 EEA1Q15075 1411 aa32.47■■■□□ 2.79
NCOR1-221ENST00000582357 WDR97A6NE52 1622 aa32.45■■■□□ 2.79
NCOR1-221ENST00000582357 ZNF608Q9ULD9 1512 aaPredicted RBP32.41■■■□□ 2.78
NCOR1-221ENST00000582357 CSRNP3Q8WYN3 585 aa32.4■■■□□ 2.78
NCOR1-221ENST00000582357 AQRO60306 1485 aaKnown RBP eCLIP32.36■■■□□ 2.775e-8■■■□□ 17.4
NCOR1-221ENST00000582357 EHMT2Q96KQ7 1210 aa32.33■■■□□ 2.77
NCOR1-221ENST00000582357 ABCA5Q8WWZ7 1642 aa32.32■■■□□ 2.76
NCOR1-221ENST00000582357 IGF1RP08069 1367 aa32.31■■■□□ 2.76
NCOR1-221ENST00000582357 GAPVD1Q14C86 1478 aa32.31■■■□□ 2.76
NCOR1-221ENST00000582357 EIF4G3O43432 1585 aaKnown RBP32.21■■■□□ 2.75
NCOR1-221ENST00000582357 PRXQ9BXM0 1461 aa32.13■■■□□ 2.73
NCOR1-221ENST00000582357 ERICH3Q5RHP9 1530 aa32.13■■■□□ 2.73
NCOR1-221ENST00000582357 GRIN2BQ13224 1484 aa32.12■■■□□ 2.73
NCOR1-221ENST00000582357 KIF21BO75037 1637 aa32.11■■■□□ 2.73
NCOR1-221ENST00000582357 CARMIL1Q5VZK9 1371 aa32.11■■■□□ 2.73
NCOR1-221ENST00000582357 PBRM1Q86U86 1689 aa32.1■■■□□ 2.73
NCOR1-221ENST00000582357 RAPGEF2Q9Y4G8 1499 aa32.08■■■□□ 2.73
NCOR1-221ENST00000582357 GOLGA3Q08378 1498 aa32.08■■■□□ 2.73
NCOR1-221ENST00000582357 TNIKQ9UKE5 1360 aa32.04■■■□□ 2.72
NCOR1-221ENST00000582357 SNAPC4Q5SXM2 1469 aa32.01■■■□□ 2.72
NCOR1-221ENST00000582357 CUL7Q14999 1698 aa31.99■■■□□ 2.71
NCOR1-221ENST00000582357 UBTFP17480 764 aaKnown RBP31.95■■■□□ 2.7
NCOR1-221ENST00000582357 ADAMTS12P58397 1594 aa31.93■■■□□ 2.7
NCOR1-221ENST00000582357 FHAD1B1AJZ9 1412 aa31.93■■■□□ 2.7
NCOR1-221ENST00000582357 CEP162Q5TB80 1403 aa31.92■■■□□ 2.7
NCOR1-221ENST00000582357 MAGI1Q96QZ7 1491 aaPredicted RBP31.9■■■□□ 2.7
NCOR1-221ENST00000582357 PCGF6Q9BYE7 350 aa31.86■■■□□ 2.69
NCOR1-221ENST00000582357 FBLN2P98095 1184 aa31.82■■■□□ 2.69
NCOR1-221ENST00000582357 SYNJ2O15056 1496 aa31.81■■■□□ 2.68
NCOR1-221ENST00000582357 CHMP7Q8WUX9 453 aaPredicted RBP31.8■■■□□ 2.68
NCOR1-221ENST00000582357 TRIM26Q12899 539 aaPredicted RBP31.75■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms