RNA–Protein interactions for RNA: ENST00000582297.5

CYB561-216, Transcript of cytochrome b561, humanhuman

TSL 3 BASIC

Gene CYB561, Length 897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561-216ENST00000582297 NISCHQ9Y2I1 1504 aa40.97■■■■■ 4.15
CYB561-216ENST00000582297 CCDC180Q9P1Z9 1646 aa36.31■■■■□ 3.4
CYB561-216ENST00000582297 ABCC9O60706 1549 aa35.47■■■■□ 3.27
CYB561-216ENST00000582297 DCAF8L2P0C7V8 631 aa34.29■■■■□ 3.08
CYB561-216ENST00000582297 ZCCHC6Q5VYS8 1495 aaKnown RBP34.17■■■■□ 3.06
CYB561-216ENST00000582297 RB1CC1Q8TDY2 1594 aa34.07■■■■□ 3.05
CYB561-216ENST00000582297 NACADO15069 1562 aa34.04■■■■□ 3.04
CYB561-216ENST00000582297 MYO15BQ96JP2 1530 aa33.79■■■■□ 3
CYB561-216ENST00000582297 DCAF1Q9Y4B6 1507 aa33.77■■■■□ 3
CYB561-216ENST00000582297 UNC13AQ9UPW8 1703 aa33.5■■■□□ 2.95
CYB561-216ENST00000582297 SCRIBQ14160 1630 aa33.33■■■□□ 2.93
CYB561-216ENST00000582297 PABPN1Q86U42 306 aaKnown RBP eCLIP33.2■■■□□ 2.91
CYB561-216ENST00000582297 BICRAQ9NZM4 1560 aa33.13■■■□□ 2.89
CYB561-216ENST00000582297 SHROOM4Q9ULL8 1493 aa32.72■■■□□ 2.83
CYB561-216ENST00000582297 DNAJC5BQ9UF47 199 aa32.37■■■□□ 2.77
CYB561-216ENST00000582297 EIF4G1Q04637 1599 aaKnown RBP32.2■■■□□ 2.75
CYB561-216ENST00000582297 CC2D2AQ9P2K1 1620 aa32.06■■■□□ 2.72
CYB561-216ENST00000582297 CECR2Q9BXF3 1484 aa32■■■□□ 2.71
CYB561-216ENST00000582297 SMARCA4P51532 1647 aa31.8■■■□□ 2.68
CYB561-216ENST00000582297 BAZ1AQ9NRL2 1556 aaPredicted RBP31.71■■■□□ 2.67
CYB561-216ENST00000582297 MROH2BQ7Z745 1585 aa31.67■■■□□ 2.66
CYB561-216ENST00000582297 ATAD2BQ9ULI0 1458 aa31.52■■■□□ 2.64
CYB561-216ENST00000582297 SMARCA2P51531 1590 aa31.44■■■□□ 2.62
CYB561-216ENST00000582297 WIZO95785 1651 aa31.4■■■□□ 2.62
CYB561-216ENST00000582297 NCAPD3P42695 1498 aa31.39■■■□□ 2.62
CYB561-216ENST00000582297 PEG3Q9GZU2 1588 aa31.36■■■□□ 2.61
CYB561-216ENST00000582297 RSF1Q96T23 1441 aaPredicted RBP31.32■■■□□ 2.6
CYB561-216ENST00000582297 BAZ1BQ9UIG0 1483 aaKnown RBP31.29■■■□□ 2.6
CYB561-216ENST00000582297 HMGXB3Q12766 1538 aa31.29■■■□□ 2.6
CYB561-216ENST00000582297 TOP2AP11388 1531 aaKnown RBP30.95■■■□□ 2.55
CYB561-216ENST00000582297 SUPT5HO00267 1087 aaKnown RBP30.82■■■□□ 2.52
CYB561-216ENST00000582297 NESP48681 1621 aa30.79■■■□□ 2.52
CYB561-216ENST00000582297 CCDC88BA6NC98 1476 aa30.62■■■□□ 2.49
CYB561-216ENST00000582297 LAMC3Q9Y6N6 1575 aa30.58■■■□□ 2.49
CYB561-216ENST00000582297 CADPSQ9ULU8 1353 aa30.52■■■□□ 2.48
CYB561-216ENST00000582297 ERCC6Q03468 1493 aa30.5■■■□□ 2.47
CYB561-216ENST00000582297 KIF21AQ7Z4S6 1674 aa30.45■■■□□ 2.46
CYB561-216ENST00000582297 CFTRP13569 1480 aa30.38■■■□□ 2.45
CYB561-216ENST00000582297 PDS5BQ9NTI5 1447 aa30.32■■■□□ 2.44
CYB561-216ENST00000582297 PRDM2Q13029 1718 aa30.29■■■□□ 2.44
CYB561-216ENST00000582297 FANCD2Q9BXW9 1451 aa30.24■■■□□ 2.43
CYB561-216ENST00000582297 THOC2Q8NI27 1593 aaKnown RBP30.21■■■□□ 2.43
CYB561-216ENST00000582297 CEP164Q9UPV0 1460 aa30.17■■■□□ 2.42
CYB561-216ENST00000582297 MRC2Q9UBG0 1479 aa30.07■■■□□ 2.4
CYB561-216ENST00000582297 CUX2O14529 1486 aa29.97■■■□□ 2.39
CYB561-216ENST00000582297 WDR62O43379 1518 aa29.96■■■□□ 2.39
CYB561-216ENST00000582297 URB2Q14146 1524 aaKnown RBP29.96■■■□□ 2.39
CYB561-216ENST00000582297 DNAJC5Q9H3Z4 198 aa29.83■■■□□ 2.37
CYB561-216ENST00000582297 TOPBP1Q92547 1522 aa29.79■■■□□ 2.36
CYB561-216ENST00000582297 DNMBPQ6XZF7 1577 aa29.76■■■□□ 2.35
CYB561-216ENST00000582297 CUX1P39880 1505 aa29.69■■■□□ 2.34
CYB561-216ENST00000582297 ABCC8Q09428 1581 aa29.69■■■□□ 2.34
CYB561-216ENST00000582297 POLA1P09884 1462 aaPredicted RBP29.55■■■□□ 2.32
CYB561-216ENST00000582297 FGD5Q6ZNL6 1462 aa29.54■■■□□ 2.32
CYB561-216ENST00000582297 SYNJ1O43426 1573 aa29.53■■■□□ 2.32
CYB561-216ENST00000582297 WRNQ14191 1432 aaPredicted RBP eCLIP29.51■■■□□ 2.319e-6■■■■■ 50.1
CYB561-216ENST00000582297 RAD54L2Q9Y4B4 1467 aa29.49■■■□□ 2.31
CYB561-216ENST00000582297 IFT140Q96RY7 1462 aa29.48■■■□□ 2.31
CYB561-216ENST00000582297 ZNF608Q9ULD9 1512 aaPredicted RBP29.46■■■□□ 2.31
CYB561-216ENST00000582297 TARBP1Q13395 1621 aaKnown RBP29.46■■■□□ 2.31
CYB561-216ENST00000582297 BIVM-ERCC5R4GMW8 1640 aa29.45■■■□□ 2.31
CYB561-216ENST00000582297 TOP2BQ02880 1626 aa29.43■■■□□ 2.3
CYB561-216ENST00000582297 SOGA1O94964 1423 aa29.41■■■□□ 2.3
CYB561-216ENST00000582297 EIF4G3O43432 1585 aaKnown RBP29.35■■■□□ 2.29
CYB561-216ENST00000582297 WDR97A6NE52 1622 aa29.31■■■□□ 2.28
CYB561-216ENST00000582297 AQRO60306 1485 aaKnown RBP eCLIP29.3■■■□□ 2.283e-7■■■■■ 51.1
CYB561-216ENST00000582297 TDRD9Q8NDG6 1382 aaKnown RBP29.28■■■□□ 2.28
CYB561-216ENST00000582297 ABCA10Q8WWZ4 1543 aa29.18■■■□□ 2.26
CYB561-216ENST00000582297 ABCA5Q8WWZ7 1642 aa29.12■■■□□ 2.25
CYB561-216ENST00000582297 PBRM1Q86U86 1689 aa29.12■■■□□ 2.25
CYB561-216ENST00000582297 GAPVD1Q14C86 1478 aa29.08■■■□□ 2.25
CYB561-216ENST00000582297 SNAPC4Q5SXM2 1469 aa29.04■■■□□ 2.24
CYB561-216ENST00000582297 GRIN2BQ13224 1484 aa29.01■■■□□ 2.23
CYB561-216ENST00000582297 CHD1O14646 1710 aa29■■■□□ 2.23
CYB561-216ENST00000582297 TRIM41Q8WV44 630 aa28.98■■■□□ 2.23
CYB561-216ENST00000582297 FBLN2P98095 1184 aa28.94■■■□□ 2.22
CYB561-216ENST00000582297 MAGI1Q96QZ7 1491 aaPredicted RBP28.89■■■□□ 2.22
CYB561-216ENST00000582297 KIF27Q86VH2 1401 aa28.84■■■□□ 2.21
CYB561-216ENST00000582297 ADAMTS12P58397 1594 aa28.84■■■□□ 2.21
CYB561-216ENST00000582297 RUSC2Q8N2Y8 1516 aa28.83■■■□□ 2.21
CYB561-216ENST00000582297 ERICH3Q5RHP9 1530 aa28.82■■■□□ 2.2
CYB561-216ENST00000582297 SYNJ2O15056 1496 aa28.8■■■□□ 2.2
CYB561-216ENST00000582297 CHIC1Q5VXU3 224 aa28.8■■■□□ 2.2
CYB561-216ENST00000582297 OSCARQ8IYS5 282 aa28.79■■■□□ 2.2
CYB561-216ENST00000582297 CHMP7Q8WUX9 453 aaPredicted RBP28.79■■■□□ 2.2
CYB561-216ENST00000582297 IGF1RP08069 1367 aa28.71■■■□□ 2.19
CYB561-216ENST00000582297 FHAD1B1AJZ9 1412 aa28.7■■■□□ 2.19
CYB561-216ENST00000582297 GRIN2AQ12879 1464 aa28.67■■■□□ 2.18
CYB561-216ENST00000582297 CUL7Q14999 1698 aa28.64■■■□□ 2.18
CYB561-216ENST00000582297 CEP170Q5SW79 1584 aa28.59■■■□□ 2.17
CYB561-216ENST00000582297 CLASP1Q7Z460 1538 aa28.57■■■□□ 2.16
CYB561-216ENST00000582297 CARMIL1Q5VZK9 1371 aa28.55■■■□□ 2.16
CYB561-216ENST00000582297 FAM9AQ8IZU1 332 aaPredicted RBP28.55■■■□□ 2.16
CYB561-216ENST00000582297 NUP160Q12769 1436 aa28.49■■■□□ 2.15
CYB561-216ENST00000582297 RIMBP3CA6NJZ7 1639 aa28.46■■■□□ 2.15
CYB561-216ENST00000582297 RIMBP3BA6NNM3 1639 aa28.46■■■□□ 2.15
CYB561-216ENST00000582297 RIMBP3Q9UFD9 1639 aa28.46■■■□□ 2.15
CYB561-216ENST00000582297 ARHGEF11O15085 1522 aa28.42■■■□□ 2.14
CYB561-216ENST00000582297 RAPGEF2Q9Y4G8 1499 aa28.4■■■□□ 2.14
CYB561-216ENST00000582297 CSRNP3Q8WYN3 585 aa28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms