RNA–Protein interactions for RNA: ENST00000582050.1

EIF4A1-222, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 5

Gene EIF4A1, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-222ENST00000582050 NISCHQ9Y2I1 1504 aa42.28■■■■■ 4.36
EIF4A1-222ENST00000582050 CCDC180Q9P1Z9 1646 aa37.3■■■■□ 3.56
EIF4A1-222ENST00000582050 ABCC9O60706 1549 aa35.8■■■■□ 3.32
EIF4A1-222ENST00000582050 ZCCHC6Q5VYS8 1495 aaKnown RBP35.35■■■■□ 3.25
EIF4A1-222ENST00000582050 DCAF1Q9Y4B6 1507 aa35.06■■■■□ 3.2
EIF4A1-222ENST00000582050 DCAF8L2P0C7V8 631 aa35.04■■■■□ 3.2
EIF4A1-222ENST00000582050 MYO15BQ96JP2 1530 aa34.97■■■■□ 3.19
EIF4A1-222ENST00000582050 NACADO15069 1562 aa34.93■■■■□ 3.18
EIF4A1-222ENST00000582050 RB1CC1Q8TDY2 1594 aa34.79■■■■□ 3.16
EIF4A1-222ENST00000582050 SCRIBQ14160 1630 aa34.02■■■■□ 3.04
EIF4A1-222ENST00000582050 UNC13AQ9UPW8 1703 aa33.95■■■■□ 3.03
EIF4A1-222ENST00000582050 SHROOM4Q9ULL8 1493 aa33.74■■■□□ 2.99
EIF4A1-222ENST00000582050 BICRAQ9NZM4 1560 aa33.67■■■□□ 2.98
EIF4A1-222ENST00000582050 PABPN1Q86U42 306 aaKnown RBP eCLIP33.56■■■□□ 2.96
EIF4A1-222ENST00000582050 CECR2Q9BXF3 1484 aa32.81■■■□□ 2.84
EIF4A1-222ENST00000582050 EIF4G1Q04637 1599 aaKnown RBP32.74■■■□□ 2.83
EIF4A1-222ENST00000582050 BAZ1AQ9NRL2 1556 aaPredicted RBP32.74■■■□□ 2.83
EIF4A1-222ENST00000582050 SMARCA4P51532 1647 aa32.65■■■□□ 2.82
EIF4A1-222ENST00000582050 MROH2BQ7Z745 1585 aa32.56■■■□□ 2.8
EIF4A1-222ENST00000582050 RSF1Q96T23 1441 aaPredicted RBP32.45■■■□□ 2.79
EIF4A1-222ENST00000582050 CC2D2AQ9P2K1 1620 aa32.43■■■□□ 2.78
EIF4A1-222ENST00000582050 PEG3Q9GZU2 1588 aa32.35■■■□□ 2.77
EIF4A1-222ENST00000582050 SMARCA2P51531 1590 aa32.33■■■□□ 2.77
EIF4A1-222ENST00000582050 ATAD2BQ9ULI0 1458 aa32.31■■■□□ 2.76
EIF4A1-222ENST00000582050 WIZO95785 1651 aa32.24■■■□□ 2.75
EIF4A1-222ENST00000582050 DNAJC5BQ9UF47 199 aa32.23■■■□□ 2.75
EIF4A1-222ENST00000582050 NCAPD3P42695 1498 aa32.23■■■□□ 2.75
EIF4A1-222ENST00000582050 SUPT5HO00267 1087 aaKnown RBP32.13■■■□□ 2.73
EIF4A1-222ENST00000582050 HMGXB3Q12766 1538 aa32.11■■■□□ 2.73
EIF4A1-222ENST00000582050 BAZ1BQ9UIG0 1483 aaKnown RBP32.09■■■□□ 2.73
EIF4A1-222ENST00000582050 TOP2AP11388 1531 aaKnown RBP31.96■■■□□ 2.71
EIF4A1-222ENST00000582050 CCDC88BA6NC98 1476 aa31.59■■■□□ 2.65
EIF4A1-222ENST00000582050 CADPSQ9ULU8 1353 aa31.31■■■□□ 2.6
EIF4A1-222ENST00000582050 CFTRP13569 1480 aa31.27■■■□□ 2.6
EIF4A1-222ENST00000582050 LAMC3Q9Y6N6 1575 aa31.26■■■□□ 2.59
EIF4A1-222ENST00000582050 NESP48681 1621 aa31.16■■■□□ 2.58
EIF4A1-222ENST00000582050 PRDM2Q13029 1718 aa31.07■■■□□ 2.56
EIF4A1-222ENST00000582050 PDS5BQ9NTI5 1447 aa31.05■■■□□ 2.56
EIF4A1-222ENST00000582050 FANCD2Q9BXW9 1451 aa30.93■■■□□ 2.54
EIF4A1-222ENST00000582050 ERCC6Q03468 1493 aa30.83■■■□□ 2.53
EIF4A1-222ENST00000582050 CEP164Q9UPV0 1460 aa30.83■■■□□ 2.53
EIF4A1-222ENST00000582050 KIF21AQ7Z4S6 1674 aa30.81■■■□□ 2.52
EIF4A1-222ENST00000582050 MRC2Q9UBG0 1479 aa30.64■■■□□ 2.5
EIF4A1-222ENST00000582050 ABCC8Q09428 1581 aa30.62■■■□□ 2.49
EIF4A1-222ENST00000582050 WRNQ14191 1432 aaPredicted RBP eCLIP30.6■■■□□ 2.49
EIF4A1-222ENST00000582050 THOC2Q8NI27 1593 aaKnown RBP30.56■■■□□ 2.48
EIF4A1-222ENST00000582050 URB2Q14146 1524 aaKnown RBP30.55■■■□□ 2.48
EIF4A1-222ENST00000582050 DNMBPQ6XZF7 1577 aa30.54■■■□□ 2.48
EIF4A1-222ENST00000582050 WDR62O43379 1518 aa30.52■■■□□ 2.48
EIF4A1-222ENST00000582050 CUX1P39880 1505 aa30.51■■■□□ 2.47
EIF4A1-222ENST00000582050 TOPBP1Q92547 1522 aa30.51■■■□□ 2.47
EIF4A1-222ENST00000582050 TOP2BQ02880 1626 aa30.46■■■□□ 2.47
EIF4A1-222ENST00000582050 SYNJ1O43426 1573 aa30.44■■■□□ 2.46
EIF4A1-222ENST00000582050 BIVM-ERCC5R4GMW8 1640 aa30.44■■■□□ 2.46
EIF4A1-222ENST00000582050 CHIC1Q5VXU3 224 aa30.41■■■□□ 2.46
EIF4A1-222ENST00000582050 TRIM41Q8WV44 630 aa30.37■■■□□ 2.45
EIF4A1-222ENST00000582050 FGD5Q6ZNL6 1462 aa30.31■■■□□ 2.44
EIF4A1-222ENST00000582050 CUX2O14529 1486 aa30.29■■■□□ 2.44
EIF4A1-222ENST00000582050 POLA1P09884 1462 aaPredicted RBP30.29■■■□□ 2.44
EIF4A1-222ENST00000582050 SOGA1O94964 1423 aa30.21■■■□□ 2.43
EIF4A1-222ENST00000582050 IFT140Q96RY7 1462 aa30.17■■■□□ 2.42
EIF4A1-222ENST00000582050 RAD54L2Q9Y4B4 1467 aa30.12■■■□□ 2.41
EIF4A1-222ENST00000582050 TARBP1Q13395 1621 aaKnown RBP30.11■■■□□ 2.41
EIF4A1-222ENST00000582050 ABCA10Q8WWZ4 1543 aa30.08■■■□□ 2.41
EIF4A1-222ENST00000582050 WDR97A6NE52 1622 aa30.01■■■□□ 2.39
EIF4A1-222ENST00000582050 KIF27Q86VH2 1401 aa29.93■■■□□ 2.38
EIF4A1-222ENST00000582050 TDRD9Q8NDG6 1382 aaKnown RBP29.92■■■□□ 2.38
EIF4A1-222ENST00000582050 ZNF608Q9ULD9 1512 aaPredicted RBP29.92■■■□□ 2.38
EIF4A1-222ENST00000582050 ABCA5Q8WWZ7 1642 aa29.87■■■□□ 2.37
EIF4A1-222ENST00000582050 GAPVD1Q14C86 1478 aa29.87■■■□□ 2.37
EIF4A1-222ENST00000582050 AQRO60306 1485 aaKnown RBP eCLIP29.86■■■□□ 2.372e-8■■■□□ 19.1
EIF4A1-222ENST00000582050 EIF4G3O43432 1585 aaKnown RBP29.85■■■□□ 2.37
EIF4A1-222ENST00000582050 EEA1Q15075 1411 aa29.84■■■□□ 2.37
EIF4A1-222ENST00000582050 RUSC2Q8N2Y8 1516 aa29.79■■■□□ 2.36
EIF4A1-222ENST00000582050 GRIN2BQ13224 1484 aa29.77■■■□□ 2.36
EIF4A1-222ENST00000582050 ERICH3Q5RHP9 1530 aa29.74■■■□□ 2.35
EIF4A1-222ENST00000582050 PBRM1Q86U86 1689 aa29.72■■■□□ 2.35
EIF4A1-222ENST00000582050 IGF1RP08069 1367 aa29.71■■■□□ 2.35
EIF4A1-222ENST00000582050 CSRNP3Q8WYN3 585 aa29.67■■■□□ 2.34
EIF4A1-222ENST00000582050 FAM9AQ8IZU1 332 aaPredicted RBP29.65■■■□□ 2.34
EIF4A1-222ENST00000582050 MAGI1Q96QZ7 1491 aaPredicted RBP29.63■■■□□ 2.33
EIF4A1-222ENST00000582050 SNAPC4Q5SXM2 1469 aa29.6■■■□□ 2.33
EIF4A1-222ENST00000582050 CUL7Q14999 1698 aa29.6■■■□□ 2.33
EIF4A1-222ENST00000582050 FHAD1B1AJZ9 1412 aa29.55■■■□□ 2.32
EIF4A1-222ENST00000582050 CARMIL1Q5VZK9 1371 aa29.55■■■□□ 2.32
EIF4A1-222ENST00000582050 ADAMTS12P58397 1594 aa29.53■■■□□ 2.32
EIF4A1-222ENST00000582050 PRXQ9BXM0 1461 aa29.51■■■□□ 2.31
EIF4A1-222ENST00000582050 SYNJ2O15056 1496 aa29.5■■■□□ 2.31
EIF4A1-222ENST00000582050 RAPGEF2Q9Y4G8 1499 aa29.45■■■□□ 2.31
EIF4A1-222ENST00000582050 CHMP7Q8WUX9 453 aaPredicted RBP29.45■■■□□ 2.31
EIF4A1-222ENST00000582050 KIF21BO75037 1637 aa29.43■■■□□ 2.3
EIF4A1-222ENST00000582050 FBLN2P98095 1184 aa29.39■■■□□ 2.3
EIF4A1-222ENST00000582050 GRIN2AQ12879 1464 aa29.37■■■□□ 2.29
EIF4A1-222ENST00000582050 CHD1O14646 1710 aa29.33■■■□□ 2.29
EIF4A1-222ENST00000582050 GOLGA3Q08378 1498 aa29.31■■■□□ 2.28
EIF4A1-222ENST00000582050 NUP160Q12769 1436 aa29.22■■■□□ 2.27
EIF4A1-222ENST00000582050 UBTFP17480 764 aaKnown RBP29.19■■■□□ 2.26
EIF4A1-222ENST00000582050 OSCARQ8IYS5 282 aa29.18■■■□□ 2.26
EIF4A1-222ENST00000582050 CEP170Q5SW79 1584 aa29.17■■■□□ 2.26
EIF4A1-222ENST00000582050 EHMT2Q96KQ7 1210 aa29.16■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms