RNA–Protein interactions for RNA: ENST00000581641.1

TWSG1-202, Transcript of twisted gastrulation BMP signaling modulator 1, humanhuman

TSL 2 BASIC

Gene TWSG1, Length 1,119 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TWSG1-202ENST00000581641 NISCHQ9Y2I1 1504 aa42.81■■■■■ 4.44
TWSG1-202ENST00000581641 CCDC180Q9P1Z9 1646 aa38.57■■■■□ 3.77
TWSG1-202ENST00000581641 ABCC9O60706 1549 aa38.26■■■■□ 3.72
TWSG1-202ENST00000581641 RB1CC1Q8TDY2 1594 aa36.53■■■■□ 3.44
TWSG1-202ENST00000581641 NACADO15069 1562 aa36.29■■■■□ 3.4
TWSG1-202ENST00000581641 UNC13AQ9UPW8 1703 aa35.99■■■■□ 3.35
TWSG1-202ENST00000581641 MYO15BQ96JP2 1530 aa35.86■■■■□ 3.33
TWSG1-202ENST00000581641 DNAJC5BQ9UF47 199 aa35.8■■■■□ 3.32
TWSG1-202ENST00000581641 DCAF8L2P0C7V8 631 aa35.65■■■■□ 3.3
TWSG1-202ENST00000581641 BICRAQ9NZM4 1560 aa35.6■■■■□ 3.29
TWSG1-202ENST00000581641 ZCCHC6Q5VYS8 1495 aaKnown RBP35.56■■■■□ 3.28
TWSG1-202ENST00000581641 PABPN1Q86U42 306 aaKnown RBP eCLIP35.47■■■■□ 3.27
TWSG1-202ENST00000581641 DCAF1Q9Y4B6 1507 aa35.42■■■■□ 3.26
TWSG1-202ENST00000581641 SHROOM4Q9ULL8 1493 aa35.04■■■■□ 3.2
TWSG1-202ENST00000581641 SCRIBQ14160 1630 aa35.03■■■■□ 3.2
TWSG1-202ENST00000581641 CC2D2AQ9P2K1 1620 aa34.7■■■■□ 3.14
TWSG1-202ENST00000581641 EIF4G1Q04637 1599 aaKnown RBP34.64■■■■□ 3.14
TWSG1-202ENST00000581641 CECR2Q9BXF3 1484 aa34.46■■■■□ 3.11
TWSG1-202ENST00000581641 SMARCA4P51532 1647 aa33.46■■■□□ 2.95
TWSG1-202ENST00000581641 NCAPD3P42695 1498 aa33.45■■■□□ 2.95
TWSG1-202ENST00000581641 ATAD2BQ9ULI0 1458 aa33.37■■■□□ 2.93
TWSG1-202ENST00000581641 HMGXB3Q12766 1538 aa33.33■■■□□ 2.93
TWSG1-202ENST00000581641 SMARCA2P51531 1590 aa33.3■■■□□ 2.92
TWSG1-202ENST00000581641 BAZ1AQ9NRL2 1556 aaPredicted RBP33.22■■■□□ 2.91
TWSG1-202ENST00000581641 PEG3Q9GZU2 1588 aa33.18■■■□□ 2.9
TWSG1-202ENST00000581641 BAZ1BQ9UIG0 1483 aaKnown RBP33.02■■■□□ 2.88
TWSG1-202ENST00000581641 MROH2BQ7Z745 1585 aa33■■■□□ 2.87
TWSG1-202ENST00000581641 CUX2O14529 1486 aa32.99■■■□□ 2.87
TWSG1-202ENST00000581641 NESP48681 1621 aa32.95■■■□□ 2.87
TWSG1-202ENST00000581641 ERCC6Q03468 1493 aa32.95■■■□□ 2.87
TWSG1-202ENST00000581641 THOC2Q8NI27 1593 aaKnown RBP32.77■■■□□ 2.84
TWSG1-202ENST00000581641 LAMC3Q9Y6N6 1575 aa32.76■■■□□ 2.84
TWSG1-202ENST00000581641 DNAJC5Q9H3Z4 198 aa32.75■■■□□ 2.83
TWSG1-202ENST00000581641 KIF21AQ7Z4S6 1674 aa32.69■■■□□ 2.82
TWSG1-202ENST00000581641 WIZO95785 1651 aa32.66■■■□□ 2.82
TWSG1-202ENST00000581641 PDS5BQ9NTI5 1447 aa32.39■■■□□ 2.78
TWSG1-202ENST00000581641 CADPSQ9ULU8 1353 aa32.35■■■□□ 2.77
TWSG1-202ENST00000581641 RSF1Q96T23 1441 aaPredicted RBP32.26■■■□□ 2.76
TWSG1-202ENST00000581641 WDR62O43379 1518 aa32.26■■■□□ 2.75
TWSG1-202ENST00000581641 TOP2AP11388 1531 aaKnown RBP32.23■■■□□ 2.75
TWSG1-202ENST00000581641 MRC2Q9UBG0 1479 aa32.23■■■□□ 2.75
TWSG1-202ENST00000581641 CFTRP13569 1480 aa32.1■■■□□ 2.73
TWSG1-202ENST00000581641 CEP164Q9UPV0 1460 aa32.09■■■□□ 2.73
TWSG1-202ENST00000581641 PRDM2Q13029 1718 aa32.07■■■□□ 2.72
TWSG1-202ENST00000581641 FANCD2Q9BXW9 1451 aa32.05■■■□□ 2.72
TWSG1-202ENST00000581641 URB2Q14146 1524 aaKnown RBP31.87■■■□□ 2.69
TWSG1-202ENST00000581641 CCDC88BA6NC98 1476 aa31.76■■■□□ 2.67
TWSG1-202ENST00000581641 TOPBP1Q92547 1522 aa31.5■■■□□ 2.63
TWSG1-202ENST00000581641 ZNF608Q9ULD9 1512 aaPredicted RBP31.44■■■□□ 2.62
TWSG1-202ENST00000581641 DNMBPQ6XZF7 1577 aa31.43■■■□□ 2.62
TWSG1-202ENST00000581641 IFT140Q96RY7 1462 aa31.43■■■□□ 2.62
TWSG1-202ENST00000581641 EIF4G3O43432 1585 aaKnown RBP31.39■■■□□ 2.61
TWSG1-202ENST00000581641 TARBP1Q13395 1621 aaKnown RBP31.34■■■□□ 2.61
TWSG1-202ENST00000581641 ABCC8Q09428 1581 aa31.34■■■□□ 2.61
TWSG1-202ENST00000581641 OSCARQ8IYS5 282 aa31.24■■■□□ 2.59
TWSG1-202ENST00000581641 TRIM41Q8WV44 630 aa31.23■■■□□ 2.59
TWSG1-202ENST00000581641 POLA1P09884 1462 aaPredicted RBP31.19■■■□□ 2.58
TWSG1-202ENST00000581641 CHD1O14646 1710 aa31.18■■■□□ 2.58
TWSG1-202ENST00000581641 RIMBP3CA6NJZ7 1639 aa31.18■■■□□ 2.58
TWSG1-202ENST00000581641 RIMBP3BA6NNM3 1639 aa31.18■■■□□ 2.58
TWSG1-202ENST00000581641 RIMBP3Q9UFD9 1639 aa31.18■■■□□ 2.58
TWSG1-202ENST00000581641 AQRO60306 1485 aaKnown RBP eCLIP31.06■■■□□ 2.56
TWSG1-202ENST00000581641 ARHGEF11O15085 1522 aa31.03■■■□□ 2.56
TWSG1-202ENST00000581641 CUX1P39880 1505 aa31.02■■■□□ 2.56
TWSG1-202ENST00000581641 RAD54L2Q9Y4B4 1467 aa31.01■■■□□ 2.56
TWSG1-202ENST00000581641 WDR97A6NE52 1622 aa31.01■■■□□ 2.55
TWSG1-202ENST00000581641 FGD5Q6ZNL6 1462 aa30.99■■■□□ 2.55
TWSG1-202ENST00000581641 SOGA1O94964 1423 aa30.89■■■□□ 2.53
TWSG1-202ENST00000581641 TDRD9Q8NDG6 1382 aaKnown RBP30.82■■■□□ 2.52
TWSG1-202ENST00000581641 PBRM1Q86U86 1689 aa30.82■■■□□ 2.52
TWSG1-202ENST00000581641 SNAPC4Q5SXM2 1469 aa30.82■■■□□ 2.52
TWSG1-202ENST00000581641 CLASP1Q7Z460 1538 aa30.78■■■□□ 2.52
TWSG1-202ENST00000581641 ABCA5Q8WWZ7 1642 aa30.74■■■□□ 2.51
TWSG1-202ENST00000581641 ARAP1Q96P48 1450 aa30.74■■■□□ 2.51
TWSG1-202ENST00000581641 MAGI1Q96QZ7 1491 aaPredicted RBP30.74■■■□□ 2.51
TWSG1-202ENST00000581641 GRIN2BQ13224 1484 aa30.7■■■□□ 2.5
TWSG1-202ENST00000581641 SYNJ1O43426 1573 aa30.65■■■□□ 2.5
TWSG1-202ENST00000581641 ABCA10Q8WWZ4 1543 aa30.64■■■□□ 2.5
TWSG1-202ENST00000581641 BIVM-ERCC5R4GMW8 1640 aa30.64■■■□□ 2.5
TWSG1-202ENST00000581641 SYNJ2O15056 1496 aa30.62■■■□□ 2.49
TWSG1-202ENST00000581641 FBLN2P98095 1184 aa30.61■■■□□ 2.49
TWSG1-202ENST00000581641 GAPVD1Q14C86 1478 aa30.58■■■□□ 2.49
TWSG1-202ENST00000581641 SUPT5HO00267 1087 aaKnown RBP30.58■■■□□ 2.49
TWSG1-202ENST00000581641 TOP2BQ02880 1626 aa30.56■■■□□ 2.48
TWSG1-202ENST00000581641 CYB5RLQ6IPT4 315 aa30.51■■■□□ 2.47
TWSG1-202ENST00000581641 ADAMTS12P58397 1594 aa30.47■■■□□ 2.47
TWSG1-202ENST00000581641 CHMP7Q8WUX9 453 aaPredicted RBP30.43■■■□□ 2.46
TWSG1-202ENST00000581641 WRNQ14191 1432 aaPredicted RBP eCLIP30.39■■■□□ 2.46
TWSG1-202ENST00000581641 GRIN2AQ12879 1464 aa30.36■■■□□ 2.45
TWSG1-202ENST00000581641 CEP170Q5SW79 1584 aa30.34■■■□□ 2.45
TWSG1-202ENST00000581641 ERCC6L2Q5T890 1561 aa30.28■■■□□ 2.44
TWSG1-202ENST00000581641 SHROOM2Q13796 1616 aa30.28■■■□□ 2.44
TWSG1-202ENST00000581641 NUP160Q12769 1436 aa30.27■■■□□ 2.44
TWSG1-202ENST00000581641 ERICH3Q5RHP9 1530 aa30.27■■■□□ 2.44
TWSG1-202ENST00000581641 FHAD1B1AJZ9 1412 aa30.19■■■□□ 2.42
TWSG1-202ENST00000581641 RUSC2Q8N2Y8 1516 aa30.07■■■□□ 2.4
TWSG1-202ENST00000581641 TRHP20396 242 aaPredicted RBP30.07■■■□□ 2.4
TWSG1-202ENST00000581641 CUL7Q14999 1698 aa29.91■■■□□ 2.38
TWSG1-202ENST00000581641 KIF13AQ9H1H9 1805 aa29.88■■■□□ 2.37
TWSG1-202ENST00000581641 PRG4Q92954 1404 aaPredicted RBP29.85■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms