RNA–Protein interactions for RNA: ENST00000581571.5

LINC00668-205, long intergenic non-protein coding RNA 668, humanhuman

TSL 1 (best) BASIC

Gene LINC00668, Length 1,748 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00668-205ENST00000581571 NISCHQ9Y2I1 1504 aa39.3■■■■□ 3.88
LINC00668-205ENST00000581571 ABCC9O60706 1549 aa35.64■■■■□ 3.3
LINC00668-205ENST00000581571 CCDC180Q9P1Z9 1646 aa35.45■■■■□ 3.27
LINC00668-205ENST00000581571 RB1CC1Q8TDY2 1594 aa33.83■■■■□ 3.01
LINC00668-205ENST00000581571 DNAJC5BQ9UF47 199 aa33.6■■■□□ 2.97
LINC00668-205ENST00000581571 NACADO15069 1562 aa33.52■■■□□ 2.96
LINC00668-205ENST00000581571 DCAF8L2P0C7V8 631 aa33.23■■■□□ 2.91
LINC00668-205ENST00000581571 UNC13AQ9UPW8 1703 aa33.17■■■□□ 2.9
LINC00668-205ENST00000581571 PABPN1Q86U42 306 aaKnown RBP eCLIP33.09■■■□□ 2.89
LINC00668-205ENST00000581571 MYO15BQ96JP2 1530 aa32.96■■■□□ 2.87
LINC00668-205ENST00000581571 BICRAQ9NZM4 1560 aa32.86■■■□□ 2.85
LINC00668-205ENST00000581571 ZCCHC6Q5VYS8 1495 aaKnown RBP32.53■■■□□ 2.8
LINC00668-205ENST00000581571 DCAF1Q9Y4B6 1507 aa32.44■■■□□ 2.78
LINC00668-205ENST00000581571 SHROOM4Q9ULL8 1493 aa32.37■■■□□ 2.77
LINC00668-205ENST00000581571 SCRIBQ14160 1630 aa32.27■■■□□ 2.76
LINC00668-205ENST00000581571 CC2D2AQ9P2K1 1620 aa32.22■■■□□ 2.75
LINC00668-205ENST00000581571 CECR2Q9BXF3 1484 aa32.12■■■□□ 2.73
LINC00668-205ENST00000581571 EIF4G1Q04637 1599 aaKnown RBP32.08■■■□□ 2.73
LINC00668-205ENST00000581571 DNAJC5Q9H3Z4 198 aa31.04■■■□□ 2.56
LINC00668-205ENST00000581571 NCAPD3P42695 1498 aa30.91■■■□□ 2.54
LINC00668-205ENST00000581571 CUX2O14529 1486 aa30.83■■■□□ 2.53
LINC00668-205ENST00000581571 ERCC6Q03468 1493 aa30.8■■■□□ 2.52
LINC00668-205ENST00000581571 ATAD2BQ9ULI0 1458 aa30.8■■■□□ 2.52
LINC00668-205ENST00000581571 SMARCA4P51532 1647 aa30.75■■■□□ 2.51
LINC00668-205ENST00000581571 SMARCA2P51531 1590 aa30.73■■■□□ 2.51
LINC00668-205ENST00000581571 HMGXB3Q12766 1538 aa30.71■■■□□ 2.51
LINC00668-205ENST00000581571 NESP48681 1621 aa30.55■■■□□ 2.48
LINC00668-205ENST00000581571 BAZ1AQ9NRL2 1556 aaPredicted RBP30.54■■■□□ 2.48
LINC00668-205ENST00000581571 BAZ1BQ9UIG0 1483 aaKnown RBP30.51■■■□□ 2.47
LINC00668-205ENST00000581571 PEG3Q9GZU2 1588 aa30.44■■■□□ 2.46
LINC00668-205ENST00000581571 THOC2Q8NI27 1593 aaKnown RBP30.34■■■□□ 2.45
LINC00668-205ENST00000581571 LAMC3Q9Y6N6 1575 aa30.31■■■□□ 2.44
LINC00668-205ENST00000581571 MROH2BQ7Z745 1585 aa30.28■■■□□ 2.44
LINC00668-205ENST00000581571 KIF21AQ7Z4S6 1674 aa30.23■■■□□ 2.43
LINC00668-205ENST00000581571 PDS5BQ9NTI5 1447 aa30.1■■■□□ 2.41
LINC00668-205ENST00000581571 CADPSQ9ULU8 1353 aa29.95■■■□□ 2.39
LINC00668-205ENST00000581571 WIZO95785 1651 aa29.95■■■□□ 2.38
LINC00668-205ENST00000581571 MRC2Q9UBG0 1479 aa29.88■■■□□ 2.37
LINC00668-205ENST00000581571 WDR62O43379 1518 aa29.84■■■□□ 2.37
LINC00668-205ENST00000581571 CEP164Q9UPV0 1460 aa29.72■■■□□ 2.35
LINC00668-205ENST00000581571 FANCD2Q9BXW9 1451 aa29.65■■■□□ 2.34
LINC00668-205ENST00000581571 TRIM41Q8WV44 630 aa29.61■■■□□ 2.33
LINC00668-205ENST00000581571 CFTRP13569 1480 aa29.58■■■□□ 2.33
LINC00668-205ENST00000581571 RSF1Q96T23 1441 aaPredicted RBP29.53■■■□□ 2.32
LINC00668-205ENST00000581571 TOP2AP11388 1531 aaKnown RBP29.53■■■□□ 2.32
LINC00668-205ENST00000581571 URB2Q14146 1524 aaKnown RBP29.43■■■□□ 2.3
LINC00668-205ENST00000581571 PRDM2Q13029 1718 aa29.41■■■□□ 2.3
LINC00668-205ENST00000581571 OSCARQ8IYS5 282 aa29.32■■■□□ 2.28
LINC00668-205ENST00000581571 CCDC88BA6NC98 1476 aa29.16■■■□□ 2.26
LINC00668-205ENST00000581571 IFT140Q96RY7 1462 aa29.12■■■□□ 2.25
LINC00668-205ENST00000581571 ZNF608Q9ULD9 1512 aaPredicted RBP29.1■■■□□ 2.25
LINC00668-205ENST00000581571 RIMBP3CA6NJZ7 1639 aa29.07■■■□□ 2.24
LINC00668-205ENST00000581571 RIMBP3BA6NNM3 1639 aa29.07■■■□□ 2.24
LINC00668-205ENST00000581571 RIMBP3Q9UFD9 1639 aa29.07■■■□□ 2.24
LINC00668-205ENST00000581571 TOPBP1Q92547 1522 aa29.06■■■□□ 2.24
LINC00668-205ENST00000581571 EIF4G3O43432 1585 aaKnown RBP28.98■■■□□ 2.23
LINC00668-205ENST00000581571 ABCC8Q09428 1581 aa28.97■■■□□ 2.23
LINC00668-205ENST00000581571 DNMBPQ6XZF7 1577 aa28.96■■■□□ 2.23
LINC00668-205ENST00000581571 ARHGEF11O15085 1522 aa28.91■■■□□ 2.22
LINC00668-205ENST00000581571 CHD1O14646 1710 aa28.86■■■□□ 2.21
LINC00668-205ENST00000581571 TARBP1Q13395 1621 aaKnown RBP28.85■■■□□ 2.21
LINC00668-205ENST00000581571 AQRO60306 1485 aaKnown RBP eCLIP28.79■■■□□ 2.22e-6■■■■■ 47.5
LINC00668-205ENST00000581571 POLA1P09884 1462 aaPredicted RBP28.75■■■□□ 2.19
LINC00668-205ENST00000581571 CYB5RLQ6IPT4 315 aa28.66■■■□□ 2.18
LINC00668-205ENST00000581571 RAD54L2Q9Y4B4 1467 aa28.64■■■□□ 2.18
LINC00668-205ENST00000581571 FBLN2P98095 1184 aa28.64■■■□□ 2.18
LINC00668-205ENST00000581571 ARAP1Q96P48 1450 aa28.61■■■□□ 2.17
LINC00668-205ENST00000581571 SOGA1O94964 1423 aa28.58■■■□□ 2.17
LINC00668-205ENST00000581571 TDRD9Q8NDG6 1382 aaKnown RBP28.56■■■□□ 2.16
LINC00668-205ENST00000581571 WDR97A6NE52 1622 aa28.54■■■□□ 2.16
LINC00668-205ENST00000581571 FGD5Q6ZNL6 1462 aa28.54■■■□□ 2.16
LINC00668-205ENST00000581571 SNAPC4Q5SXM2 1469 aa28.51■■■□□ 2.16
LINC00668-205ENST00000581571 CUX1P39880 1505 aa28.48■■■□□ 2.15
LINC00668-205ENST00000581571 CLASP1Q7Z460 1538 aa28.45■■■□□ 2.15
LINC00668-205ENST00000581571 TRHP20396 242 aaPredicted RBP28.44■■■□□ 2.14
LINC00668-205ENST00000581571 MAGI1Q96QZ7 1491 aaPredicted RBP28.43■■■□□ 2.14
LINC00668-205ENST00000581571 SYNJ1O43426 1573 aa28.42■■■□□ 2.14
LINC00668-205ENST00000581571 GRIN2BQ13224 1484 aa28.39■■■□□ 2.13
LINC00668-205ENST00000581571 CHMP7Q8WUX9 453 aaPredicted RBP28.38■■■□□ 2.13
LINC00668-205ENST00000581571 PBRM1Q86U86 1689 aa28.36■■■□□ 2.13
LINC00668-205ENST00000581571 SYNJ2O15056 1496 aa28.34■■■□□ 2.13
LINC00668-205ENST00000581571 GAPVD1Q14C86 1478 aa28.25■■■□□ 2.11
LINC00668-205ENST00000581571 ABCA5Q8WWZ7 1642 aa28.21■■■□□ 2.11
LINC00668-205ENST00000581571 ABCA10Q8WWZ4 1543 aa28.19■■■□□ 2.1
LINC00668-205ENST00000581571 GRIN2AQ12879 1464 aa28.03■■■□□ 2.08
LINC00668-205ENST00000581571 ADAMTS12P58397 1594 aa28.02■■■□□ 2.08
LINC00668-205ENST00000581571 SUPT5HO00267 1087 aaKnown RBP28.01■■■□□ 2.07
LINC00668-205ENST00000581571 WRNQ14191 1432 aaPredicted RBP eCLIP28.01■■■□□ 2.07
LINC00668-205ENST00000581571 BIVM-ERCC5R4GMW8 1640 aa27.99■■■□□ 2.07
LINC00668-205ENST00000581571 ERCC6L2Q5T890 1561 aa27.99■■■□□ 2.07
LINC00668-205ENST00000581571 CEP170Q5SW79 1584 aa27.97■■■□□ 2.07
LINC00668-205ENST00000581571 TOP2BQ02880 1626 aa27.96■■■□□ 2.07
LINC00668-205ENST00000581571 NUP160Q12769 1436 aa27.93■■■□□ 2.06
LINC00668-205ENST00000581571 SHROOM2Q13796 1616 aa27.89■■■□□ 2.06
LINC00668-205ENST00000581571 FHAD1B1AJZ9 1412 aa27.87■■■□□ 2.05
LINC00668-205ENST00000581571 ERICH3Q5RHP9 1530 aa27.85■■■□□ 2.05
LINC00668-205ENST00000581571 AEBP2Q6ZN18 517 aaPredicted RBP27.81■■■□□ 2.04
LINC00668-205ENST00000581571 KIF13AQ9H1H9 1805 aa27.71■■■□□ 2.03
LINC00668-205ENST00000581571 PRG4Q92954 1404 aaPredicted RBP27.68■■■□□ 2.02
LINC00668-205ENST00000581571 RUSC2Q8N2Y8 1516 aa27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms