RNA–Protein interactions for RNA: ENST00000581416.5

ATG13-227, Transcript of autophagy related 13, humanhuman

TSL 3

Gene ATG13, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-227ENST00000581416 NISCHQ9Y2I1 1504 aa39.74■■■■□ 3.95
ATG13-227ENST00000581416 CCDC180Q9P1Z9 1646 aa35.66■■■■□ 3.3
ATG13-227ENST00000581416 ABCC9O60706 1549 aa35.23■■■■□ 3.23
ATG13-227ENST00000581416 RB1CC1Q8TDY2 1594 aa33.68■■■□□ 2.98
ATG13-227ENST00000581416 NACADO15069 1562 aa33.51■■■□□ 2.96
ATG13-227ENST00000581416 UNC13AQ9UPW8 1703 aa33.24■■■□□ 2.91
ATG13-227ENST00000581416 MYO15BQ96JP2 1530 aa33.15■■■□□ 2.9
ATG13-227ENST00000581416 DCAF8L2P0C7V8 631 aa33.13■■■□□ 2.89
ATG13-227ENST00000581416 ZCCHC6Q5VYS8 1495 aaKnown RBP33.03■■■□□ 2.88
ATG13-227ENST00000581416 DCAF1Q9Y4B6 1507 aa32.84■■■□□ 2.85
ATG13-227ENST00000581416 BICRAQ9NZM4 1560 aa32.83■■■□□ 2.85
ATG13-227ENST00000581416 DNAJC5BQ9UF47 199 aa32.81■■■□□ 2.84
ATG13-227ENST00000581416 PABPN1Q86U42 306 aaKnown RBP eCLIP32.75■■■□□ 2.83
ATG13-227ENST00000581416 SCRIBQ14160 1630 aa32.47■■■□□ 2.79
ATG13-227ENST00000581416 SHROOM4Q9ULL8 1493 aa32.25■■■□□ 2.75
ATG13-227ENST00000581416 CC2D2AQ9P2K1 1620 aa31.94■■■□□ 2.7
ATG13-227ENST00000581416 EIF4G1Q04637 1599 aaKnown RBP31.92■■■□□ 2.7
ATG13-227ENST00000581416 CECR2Q9BXF3 1484 aa31.68■■■□□ 2.66
ATG13-227ENST00000581416 SMARCA4P51532 1647 aa31.02■■■□□ 2.56
ATG13-227ENST00000581416 NCAPD3P42695 1498 aa30.89■■■□□ 2.54
ATG13-227ENST00000581416 ATAD2BQ9ULI0 1458 aa30.88■■■□□ 2.53
ATG13-227ENST00000581416 BAZ1AQ9NRL2 1556 aaPredicted RBP30.81■■■□□ 2.52
ATG13-227ENST00000581416 SMARCA2P51531 1590 aa30.79■■■□□ 2.52
ATG13-227ENST00000581416 HMGXB3Q12766 1538 aa30.78■■■□□ 2.52
ATG13-227ENST00000581416 PEG3Q9GZU2 1588 aa30.71■■■□□ 2.51
ATG13-227ENST00000581416 MROH2BQ7Z745 1585 aa30.66■■■□□ 2.5
ATG13-227ENST00000581416 BAZ1BQ9UIG0 1483 aaKnown RBP30.56■■■□□ 2.48
ATG13-227ENST00000581416 NESP48681 1621 aa30.41■■■□□ 2.46
ATG13-227ENST00000581416 WIZO95785 1651 aa30.38■■■□□ 2.45
ATG13-227ENST00000581416 ERCC6Q03468 1493 aa30.31■■■□□ 2.44
ATG13-227ENST00000581416 CUX2O14529 1486 aa30.22■■■□□ 2.43
ATG13-227ENST00000581416 LAMC3Q9Y6N6 1575 aa30.22■■■□□ 2.43
ATG13-227ENST00000581416 KIF21AQ7Z4S6 1674 aa30.17■■■□□ 2.42
ATG13-227ENST00000581416 THOC2Q8NI27 1593 aaKnown RBP30.15■■■□□ 2.42
ATG13-227ENST00000581416 RSF1Q96T23 1441 aaPredicted RBP30.05■■■□□ 2.4
ATG13-227ENST00000581416 TOP2AP11388 1531 aaKnown RBP29.93■■■□□ 2.38
ATG13-227ENST00000581416 CADPSQ9ULU8 1353 aa29.91■■■□□ 2.38
ATG13-227ENST00000581416 PDS5BQ9NTI5 1447 aa29.88■■■□□ 2.37
ATG13-227ENST00000581416 DNAJC5Q9H3Z4 198 aa29.8■■■□□ 2.36
ATG13-227ENST00000581416 PRDM2Q13029 1718 aa29.71■■■□□ 2.35
ATG13-227ENST00000581416 MRC2Q9UBG0 1479 aa29.71■■■□□ 2.35
ATG13-227ENST00000581416 WDR62O43379 1518 aa29.71■■■□□ 2.35
ATG13-227ENST00000581416 CFTRP13569 1480 aa29.7■■■□□ 2.35
ATG13-227ENST00000581416 FANCD2Q9BXW9 1451 aa29.63■■■□□ 2.33
ATG13-227ENST00000581416 CEP164Q9UPV0 1460 aa29.63■■■□□ 2.33
ATG13-227ENST00000581416 CCDC88BA6NC98 1476 aa29.55■■■□□ 2.32
ATG13-227ENST00000581416 URB2Q14146 1524 aaKnown RBP29.45■■■□□ 2.31
ATG13-227ENST00000581416 TOPBP1Q92547 1522 aa29.15■■■□□ 2.26
ATG13-227ENST00000581416 DNMBPQ6XZF7 1577 aa29.09■■■□□ 2.25
ATG13-227ENST00000581416 ZNF608Q9ULD9 1512 aaPredicted RBP29.03■■■□□ 2.24
ATG13-227ENST00000581416 IFT140Q96RY7 1462 aa29.01■■■□□ 2.23
ATG13-227ENST00000581416 ABCC8Q09428 1581 aa29■■■□□ 2.23
ATG13-227ENST00000581416 TARBP1Q13395 1621 aaKnown RBP28.97■■■□□ 2.23
ATG13-227ENST00000581416 EIF4G3O43432 1585 aaKnown RBP28.96■■■□□ 2.23
ATG13-227ENST00000581416 POLA1P09884 1462 aaPredicted RBP28.86■■■□□ 2.21
ATG13-227ENST00000581416 CUX1P39880 1505 aa28.8■■■□□ 2.2
ATG13-227ENST00000581416 CHD1O14646 1710 aa28.77■■■□□ 2.2
ATG13-227ENST00000581416 SUPT5HO00267 1087 aaKnown RBP28.76■■■□□ 2.19
ATG13-227ENST00000581416 RAD54L2Q9Y4B4 1467 aa28.75■■■□□ 2.19
ATG13-227ENST00000581416 AQRO60306 1485 aaKnown RBP eCLIP28.73■■■□□ 2.19
ATG13-227ENST00000581416 FGD5Q6ZNL6 1462 aa28.72■■■□□ 2.19
ATG13-227ENST00000581416 OSCARQ8IYS5 282 aa28.72■■■□□ 2.19
ATG13-227ENST00000581416 WDR97A6NE52 1622 aa28.72■■■□□ 2.19
ATG13-227ENST00000581416 SOGA1O94964 1423 aa28.63■■■□□ 2.17
ATG13-227ENST00000581416 RIMBP3CA6NJZ7 1639 aa28.62■■■□□ 2.17
ATG13-227ENST00000581416 RIMBP3BA6NNM3 1639 aa28.62■■■□□ 2.17
ATG13-227ENST00000581416 RIMBP3Q9UFD9 1639 aa28.62■■■□□ 2.17
ATG13-227ENST00000581416 TDRD9Q8NDG6 1382 aaKnown RBP28.56■■■□□ 2.16
ATG13-227ENST00000581416 TRIM41Q8WV44 630 aa28.56■■■□□ 2.16
ATG13-227ENST00000581416 PBRM1Q86U86 1689 aa28.54■■■□□ 2.16
ATG13-227ENST00000581416 ARHGEF11O15085 1522 aa28.48■■■□□ 2.15
ATG13-227ENST00000581416 SNAPC4Q5SXM2 1469 aa28.48■■■□□ 2.15
ATG13-227ENST00000581416 BIVM-ERCC5R4GMW8 1640 aa28.48■■■□□ 2.15
ATG13-227ENST00000581416 ABCA5Q8WWZ7 1642 aa28.46■■■□□ 2.15
ATG13-227ENST00000581416 SYNJ1O43426 1573 aa28.43■■■□□ 2.14
ATG13-227ENST00000581416 TOP2BQ02880 1626 aa28.41■■■□□ 2.14
ATG13-227ENST00000581416 ABCA10Q8WWZ4 1543 aa28.41■■■□□ 2.14
ATG13-227ENST00000581416 GRIN2BQ13224 1484 aa28.39■■■□□ 2.13
ATG13-227ENST00000581416 MAGI1Q96QZ7 1491 aaPredicted RBP28.39■■■□□ 2.13
ATG13-227ENST00000581416 CLASP1Q7Z460 1538 aa28.35■■■□□ 2.13
ATG13-227ENST00000581416 GAPVD1Q14C86 1478 aa28.34■■■□□ 2.13
ATG13-227ENST00000581416 FBLN2P98095 1184 aa28.31■■■□□ 2.12
ATG13-227ENST00000581416 WRNQ14191 1432 aaPredicted RBP eCLIP28.29■■■□□ 2.12
ATG13-227ENST00000581416 SYNJ2O15056 1496 aa28.27■■■□□ 2.12
ATG13-227ENST00000581416 ARAP1Q96P48 1450 aa28.24■■■□□ 2.11
ATG13-227ENST00000581416 ADAMTS12P58397 1594 aa28.2■■■□□ 2.11
ATG13-227ENST00000581416 CHMP7Q8WUX9 453 aaPredicted RBP28.15■■■□□ 2.1
ATG13-227ENST00000581416 GRIN2AQ12879 1464 aa28.08■■■□□ 2.09
ATG13-227ENST00000581416 CYB5RLQ6IPT4 315 aa28.06■■■□□ 2.08
ATG13-227ENST00000581416 CEP170Q5SW79 1584 aa28.06■■■□□ 2.08
ATG13-227ENST00000581416 ERICH3Q5RHP9 1530 aa28.05■■■□□ 2.08
ATG13-227ENST00000581416 NUP160Q12769 1436 aa27.97■■■□□ 2.07
ATG13-227ENST00000581416 ERCC6L2Q5T890 1561 aa27.97■■■□□ 2.07
ATG13-227ENST00000581416 FHAD1B1AJZ9 1412 aa27.96■■■□□ 2.07
ATG13-227ENST00000581416 SHROOM2Q13796 1616 aa27.95■■■□□ 2.06
ATG13-227ENST00000581416 RUSC2Q8N2Y8 1516 aa27.81■■■□□ 2.04
ATG13-227ENST00000581416 CUL7Q14999 1698 aa27.76■■■□□ 2.03
ATG13-227ENST00000581416 KIF27Q86VH2 1401 aa27.69■■■□□ 2.02
ATG13-227ENST00000581416 IGF1RP08069 1367 aa27.69■■■□□ 2.02
ATG13-227ENST00000581416 PRG4Q92954 1404 aaPredicted RBP27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms