RNA–Protein interactions for RNA: ENST00000581277.1

MIR3944-201, Transcript of microRNA 3944, humanhuman

BASIC

Gene MIR3944, Length 108 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR3944-201ENST00000581277 ABCC9O60706 1549 aa9.75□□□□□ -0.85
MIR3944-201ENST00000581277 DNAJC5BQ9UF47 199 aa9.73□□□□□ -0.85
MIR3944-201ENST00000581277 NISCHQ9Y2I1 1504 aa9.69□□□□□ -0.86
MIR3944-201ENST00000581277 DNAJC5Q9H3Z4 198 aa9.61□□□□□ -0.87
MIR3944-201ENST00000581277 CCDC180Q9P1Z9 1646 aa9.02□□□□□ -0.97
MIR3944-201ENST00000581277 RB1CC1Q8TDY2 1594 aa9□□□□□ -0.97
MIR3944-201ENST00000581277 PABPN1Q86U42 306 aaKnown RBP eCLIP8.96□□□□□ -0.98
MIR3944-201ENST00000581277 CECR2Q9BXF3 1484 aa8.9□□□□□ -0.98
MIR3944-201ENST00000581277 TRIM41Q8WV44 630 aa8.89□□□□□ -0.99
MIR3944-201ENST00000581277 CUX2O14529 1486 aa8.8□□□□□ -1
MIR3944-201ENST00000581277 NACADO15069 1562 aa8.76□□□□□ -1.01
MIR3944-201ENST00000581277 CC2D2AQ9P2K1 1620 aa8.73□□□□□ -1.01
MIR3944-201ENST00000581277 AEBP2Q6ZN18 517 aaPredicted RBP8.69□□□□□ -1.02
MIR3944-201ENST00000581277 SHROOM4Q9ULL8 1493 aa8.64□□□□□ -1.03
MIR3944-201ENST00000581277 BICRAQ9NZM4 1560 aa8.63□□□□□ -1.03
MIR3944-201ENST00000581277 DCAF8L2P0C7V8 631 aa8.58□□□□□ -1.04
MIR3944-201ENST00000581277 ERCC6Q03468 1493 aa8.57□□□□□ -1.04
MIR3944-201ENST00000581277 EIF4G1Q04637 1599 aaKnown RBP8.56□□□□□ -1.04
MIR3944-201ENST00000581277 UNC13AQ9UPW8 1703 aa8.56□□□□□ -1.04
MIR3944-201ENST00000581277 MYO15BQ96JP2 1530 aa8.41□□□□□ -1.06
MIR3944-201ENST00000581277 ILDR1Q86SU0 546 aaPredicted RBP8.36□□□□□ -1.07
MIR3944-201ENST00000581277 TRHP20396 242 aaPredicted RBP8.32□□□□□ -1.08
MIR3944-201ENST00000581277 OSCARQ8IYS5 282 aa8.29□□□□□ -1.08
MIR3944-201ENST00000581277 SCRIBQ14160 1630 aa8.22□□□□□ -1.09
MIR3944-201ENST00000581277 THOC2Q8NI27 1593 aaKnown RBP8.18□□□□□ -1.1
MIR3944-201ENST00000581277 BAZ1AQ9NRL2 1556 aaPredicted RBP8.16□□□□□ -1.1
MIR3944-201ENST00000581277 RIMBP3CA6NJZ7 1639 aa8.13□□□□□ -1.11
MIR3944-201ENST00000581277 RIMBP3BA6NNM3 1639 aa8.13□□□□□ -1.11
MIR3944-201ENST00000581277 RIMBP3Q9UFD9 1639 aa8.13□□□□□ -1.11
MIR3944-201ENST00000581277 NESP48681 1621 aa8.11□□□□□ -1.11
MIR3944-201ENST00000581277 SMARCA2P51531 1590 aa8.1□□□□□ -1.11
MIR3944-201ENST00000581277 CYB5RLQ6IPT4 315 aa8.1□□□□□ -1.11
MIR3944-201ENST00000581277 NCAPD3P42695 1498 aa8.09□□□□□ -1.11
MIR3944-201ENST00000581277 PDS5BQ9NTI5 1447 aa8.08□□□□□ -1.12
MIR3944-201ENST00000581277 ARHGEF11O15085 1522 aa8.08□□□□□ -1.12
MIR3944-201ENST00000581277 LAMC3Q9Y6N6 1575 aa8.02□□□□□ -1.13
MIR3944-201ENST00000581277 DCAF1Q9Y4B6 1507 aa8□□□□□ -1.13
MIR3944-201ENST00000581277 MRC2Q9UBG0 1479 aa8□□□□□ -1.13
MIR3944-201ENST00000581277 WDR62O43379 1518 aa7.96□□□□□ -1.14
MIR3944-201ENST00000581277 HMGXB3Q12766 1538 aa7.95□□□□□ -1.14
MIR3944-201ENST00000581277 LMTK3Q96Q04 1460 aa7.94□□□□□ -1.14
MIR3944-201ENST00000581277 ATAD2BQ9ULI0 1458 aa7.94□□□□□ -1.14
MIR3944-201ENST00000581277 KIF21AQ7Z4S6 1674 aa7.93□□□□□ -1.14
MIR3944-201ENST00000581277 FBXO41Q8TF61 875 aa7.93□□□□□ -1.14
MIR3944-201ENST00000581277 ARAP1Q96P48 1450 aa7.93□□□□□ -1.14
MIR3944-201ENST00000581277 SOCS7O14512 581 aa7.92□□□□□ -1.14
MIR3944-201ENST00000581277 ZCCHC6Q5VYS8 1495 aaKnown RBP7.87□□□□□ -1.15
MIR3944-201ENST00000581277 RSF1Q96T23 1441 aaPredicted RBP7.87□□□□□ -1.15
MIR3944-201ENST00000581277 BAZ1BQ9UIG0 1483 aaKnown RBP7.86□□□□□ -1.15
MIR3944-201ENST00000581277 ERCC6L2Q5T890 1561 aa7.84□□□□□ -1.15
MIR3944-201ENST00000581277 CADPSQ9ULU8 1353 aa7.83□□□□□ -1.16
MIR3944-201ENST00000581277 CEP164Q9UPV0 1460 aa7.82□□□□□ -1.16
MIR3944-201ENST00000581277 KDM4FA0A1W2PPD8 638 aa7.8□□□□□ -1.16
MIR3944-201ENST00000581277 DISP3Q9P2K9 1392 aa7.74□□□□□ -1.17
MIR3944-201ENST00000581277 FBLN2P98095 1184 aa7.72□□□□□ -1.17
MIR3944-201ENST00000581277 ILDR2Q71H61 639 aa7.72□□□□□ -1.17
MIR3944-201ENST00000581277 FANCD2Q9BXW9 1451 aa7.72□□□□□ -1.17
MIR3944-201ENST00000581277 IFT140Q96RY7 1462 aa7.7□□□□□ -1.18
MIR3944-201ENST00000581277 HECW2Q9P2P5 1572 aa7.7□□□□□ -1.18
MIR3944-201ENST00000581277 SMARCA4P51532 1647 aa7.69□□□□□ -1.18
MIR3944-201ENST00000581277 ZNF608Q9ULD9 1512 aaPredicted RBP7.66□□□□□ -1.18
MIR3944-201ENST00000581277 SYNJ2O15056 1496 aa7.65□□□□□ -1.18
MIR3944-201ENST00000581277 PEG3Q9GZU2 1588 aa7.65□□□□□ -1.18
MIR3944-201ENST00000581277 URB2Q14146 1524 aaKnown RBP7.64□□□□□ -1.19
MIR3944-201ENST00000581277 GAPVD1Q14C86 1478 aa7.62□□□□□ -1.19
MIR3944-201ENST00000581277 CHD1O14646 1710 aa7.61□□□□□ -1.19
MIR3944-201ENST00000581277 EIF4G3O43432 1585 aaKnown RBP7.59□□□□□ -1.19
MIR3944-201ENST00000581277 ADGRL1O94910 1474 aa7.59□□□□□ -1.19
MIR3944-201ENST00000581277 SYNJ1O43426 1573 aa7.59□□□□□ -1.2
MIR3944-201ENST00000581277 CLASP1Q7Z460 1538 aa7.58□□□□□ -1.2
MIR3944-201ENST00000581277 KDM6BO15054 1643 aa7.58□□□□□ -1.2
MIR3944-201ENST00000581277 FAM69CQ0P6D2 419 aa7.56□□□□□ -1.2
MIR3944-201ENST00000581277 CHMP7Q8WUX9 453 aaPredicted RBP7.56□□□□□ -1.2
MIR3944-201ENST00000581277 CFTRP13569 1480 aa7.55□□□□□ -1.2
MIR3944-201ENST00000581277 AQRO60306 1485 aaKnown RBP eCLIP7.53□□□□□ -1.2
MIR3944-201ENST00000581277 SPATA31D1Q6ZQQ2 1576 aa7.53□□□□□ -1.2
MIR3944-201ENST00000581277 ABCC10Q5T3U5 1492 aa7.5□□□□□ -1.21
MIR3944-201ENST00000581277 NPM1P06748 294 aaKnown RBP eCLIP7.5□□□□□ -1.21
MIR3944-201ENST00000581277 ABCC8Q09428 1581 aa7.5□□□□□ -1.21
MIR3944-201ENST00000581277 KIF13AQ9H1H9 1805 aa7.48□□□□□ -1.21
MIR3944-201ENST00000581277 MROH2BQ7Z745 1585 aa7.48□□□□□ -1.21
MIR3944-201ENST00000581277 TOPBP1Q92547 1522 aa7.46□□□□□ -1.22
MIR3944-201ENST00000581277 SNAPC4Q5SXM2 1469 aa7.45□□□□□ -1.22
MIR3944-201ENST00000581277 MAGI1Q96QZ7 1491 aaPredicted RBP7.45□□□□□ -1.22
MIR3944-201ENST00000581277 CERKQ8TCT0 537 aa7.45□□□□□ -1.22
MIR3944-201ENST00000581277 TOP2BQ02880 1626 aa7.44□□□□□ -1.22
MIR3944-201ENST00000581277 MAPKBP1O60336 1514 aa7.4□□□□□ -1.22
MIR3944-201ENST00000581277 DIP2BQ9P265 1576 aa7.4□□□□□ -1.22
MIR3944-201ENST00000581277 TARBP1Q13395 1621 aaKnown RBP7.39□□□□□ -1.23
MIR3944-201ENST00000581277 WDR97A6NE52 1622 aa7.38□□□□□ -1.23
MIR3944-201ENST00000581277 TDRD9Q8NDG6 1382 aaKnown RBP7.38□□□□□ -1.23
MIR3944-201ENST00000581277 DNMBPQ6XZF7 1577 aa7.37□□□□□ -1.23
MIR3944-201ENST00000581277 GRIN2BQ13224 1484 aa7.37□□□□□ -1.23
MIR3944-201ENST00000581277 POLA1P09884 1462 aaPredicted RBP7.34□□□□□ -1.23
MIR3944-201ENST00000581277 SOGA1O94964 1423 aa7.34□□□□□ -1.23
MIR3944-201ENST00000581277 CEP170Q5SW79 1584 aa7.32□□□□□ -1.24
MIR3944-201ENST00000581277 PCF11O94913 1555 aaKnown RBP7.3□□□□□ -1.24
MIR3944-201ENST00000581277 RAD54L2Q9Y4B4 1467 aa7.3□□□□□ -1.24
MIR3944-201ENST00000581277 TSPOAP1O95153 1857 aa7.29□□□□□ -1.24
MIR3944-201ENST00000581277 PRDM2Q13029 1718 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms