RNA–Protein interactions for RNA: ENST00000580793.5

RFNG-205, Transcript of RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase, humanhuman

TSL 1 (best)

Gene RFNG, Length 1,755 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFNG-205ENST00000580793 NISCHQ9Y2I1 1504 aa39.92■■■■□ 3.98
RFNG-205ENST00000580793 CCDC180Q9P1Z9 1646 aa35.01■■■■□ 3.19
RFNG-205ENST00000580793 ABCC9O60706 1549 aa33.96■■■■□ 3.03
RFNG-205ENST00000580793 ZCCHC6Q5VYS8 1495 aaKnown RBP33.51■■■□□ 2.96
RFNG-205ENST00000580793 DCAF8L2P0C7V8 631 aa33.18■■■□□ 2.9
RFNG-205ENST00000580793 DCAF1Q9Y4B6 1507 aa32.98■■■□□ 2.87
RFNG-205ENST00000580793 NACADO15069 1562 aa32.92■■■□□ 2.86
RFNG-205ENST00000580793 MYO15BQ96JP2 1530 aa32.89■■■□□ 2.86
RFNG-205ENST00000580793 RB1CC1Q8TDY2 1594 aa32.83■■■□□ 2.85
RFNG-205ENST00000580793 SHROOM4Q9ULL8 1493 aa32.48■■■□□ 2.79
RFNG-205ENST00000580793 SCRIBQ14160 1630 aa32.16■■■□□ 2.74
RFNG-205ENST00000580793 UNC13AQ9UPW8 1703 aa31.92■■■□□ 2.7
RFNG-205ENST00000580793 PABPN1Q86U42 306 aaKnown RBP eCLIP31.91■■■□□ 2.72e-8■□□□□ 10.2
RFNG-205ENST00000580793 BICRAQ9NZM4 1560 aa31.79■■■□□ 2.68
RFNG-205ENST00000580793 SUPT5HO00267 1087 aaKnown RBP31.1■■■□□ 2.57
RFNG-205ENST00000580793 CECR2Q9BXF3 1484 aa31.06■■■□□ 2.56
RFNG-205ENST00000580793 EIF4G1Q04637 1599 aaKnown RBP30.94■■■□□ 2.54
RFNG-205ENST00000580793 DNAJC5BQ9UF47 199 aa30.88■■■□□ 2.53
RFNG-205ENST00000580793 RSF1Q96T23 1441 aaPredicted RBP30.88■■■□□ 2.53
RFNG-205ENST00000580793 MROH2BQ7Z745 1585 aa30.87■■■□□ 2.53
RFNG-205ENST00000580793 BAZ1AQ9NRL2 1556 aaPredicted RBP30.85■■■□□ 2.53
RFNG-205ENST00000580793 SMARCA4P51532 1647 aa30.78■■■□□ 2.52
RFNG-205ENST00000580793 CC2D2AQ9P2K1 1620 aa30.69■■■□□ 2.5
RFNG-205ENST00000580793 WIZO95785 1651 aa30.64■■■□□ 2.5
RFNG-205ENST00000580793 ATAD2BQ9ULI0 1458 aa30.49■■■□□ 2.47
RFNG-205ENST00000580793 NCAPD3P42695 1498 aa30.44■■■□□ 2.46
RFNG-205ENST00000580793 SMARCA2P51531 1590 aa30.44■■■□□ 2.46
RFNG-205ENST00000580793 PEG3Q9GZU2 1588 aa30.39■■■□□ 2.46
RFNG-205ENST00000580793 TOP2AP11388 1531 aaKnown RBP30.28■■■□□ 2.44
RFNG-205ENST00000580793 BAZ1BQ9UIG0 1483 aaKnown RBP30.23■■■□□ 2.43
RFNG-205ENST00000580793 HMGXB3Q12766 1538 aa30.23■■■□□ 2.43
RFNG-205ENST00000580793 CCDC88BA6NC98 1476 aa29.94■■■□□ 2.38
RFNG-205ENST00000580793 CHIC1Q5VXU3 224 aa29.63■■■□□ 2.33
RFNG-205ENST00000580793 CADPSQ9ULU8 1353 aa29.6■■■□□ 2.33
RFNG-205ENST00000580793 NESP48681 1621 aa29.5■■■□□ 2.31
RFNG-205ENST00000580793 LAMC3Q9Y6N6 1575 aa29.48■■■□□ 2.31
RFNG-205ENST00000580793 CFTRP13569 1480 aa29.47■■■□□ 2.31
RFNG-205ENST00000580793 PDS5BQ9NTI5 1447 aa29.36■■■□□ 2.29
RFNG-205ENST00000580793 ABCC8Q09428 1581 aa29.31■■■□□ 2.28
RFNG-205ENST00000580793 PRDM2Q13029 1718 aa29.28■■■□□ 2.28
RFNG-205ENST00000580793 ERCC6Q03468 1493 aa29.26■■■□□ 2.27
RFNG-205ENST00000580793 TRIM41Q8WV44 630 aa29.22■■■□□ 2.27
RFNG-205ENST00000580793 FANCD2Q9BXW9 1451 aa29.2■■■□□ 2.26
RFNG-205ENST00000580793 CEP164Q9UPV0 1460 aa29.1■■■□□ 2.25
RFNG-205ENST00000580793 WRNQ14191 1432 aaPredicted RBP eCLIP29.08■■■□□ 2.25
RFNG-205ENST00000580793 KIF21AQ7Z4S6 1674 aa29.04■■■□□ 2.24
RFNG-205ENST00000580793 SYNJ1O43426 1573 aa29.03■■■□□ 2.24
RFNG-205ENST00000580793 MRC2Q9UBG0 1479 aa28.97■■■□□ 2.23
RFNG-205ENST00000580793 TOP2BQ02880 1626 aa28.9■■■□□ 2.22
RFNG-205ENST00000580793 BIVM-ERCC5R4GMW8 1640 aa28.9■■■□□ 2.22
RFNG-205ENST00000580793 CUX1P39880 1505 aa28.88■■■□□ 2.21
RFNG-205ENST00000580793 THOC2Q8NI27 1593 aaKnown RBP28.87■■■□□ 2.21
RFNG-205ENST00000580793 URB2Q14146 1524 aaKnown RBP28.84■■■□□ 2.21
RFNG-205ENST00000580793 WDR62O43379 1518 aa28.81■■■□□ 2.2
RFNG-205ENST00000580793 CUX2O14529 1486 aa28.78■■■□□ 2.2
RFNG-205ENST00000580793 TOPBP1Q92547 1522 aa28.75■■■□□ 2.19
RFNG-205ENST00000580793 FAM9AQ8IZU1 332 aaPredicted RBP28.74■■■□□ 2.19
RFNG-205ENST00000580793 DNMBPQ6XZF7 1577 aa28.72■■■□□ 2.19
RFNG-205ENST00000580793 SOGA1O94964 1423 aa28.66■■■□□ 2.18
RFNG-205ENST00000580793 FGD5Q6ZNL6 1462 aa28.59■■■□□ 2.17
RFNG-205ENST00000580793 RUSC2Q8N2Y8 1516 aa28.59■■■□□ 2.17
RFNG-205ENST00000580793 POLA1P09884 1462 aaPredicted RBP28.54■■■□□ 2.16
RFNG-205ENST00000580793 EEA1Q15075 1411 aa28.52■■■□□ 2.16
RFNG-205ENST00000580793 LOC105371045A0A1W2PR82 267 aa28.51■■■□□ 2.15
RFNG-205ENST00000580793 IFT140Q96RY7 1462 aa28.49■■■□□ 2.15
RFNG-205ENST00000580793 RAD54L2Q9Y4B4 1467 aa28.43■■■□□ 2.14
RFNG-205ENST00000580793 EHMT2Q96KQ7 1210 aa28.38■■■□□ 2.13
RFNG-205ENST00000580793 CSRNP3Q8WYN3 585 aa28.37■■■□□ 2.13
RFNG-205ENST00000580793 TARBP1Q13395 1621 aaKnown RBP28.35■■■□□ 2.13
RFNG-205ENST00000580793 KIF27Q86VH2 1401 aa28.35■■■□□ 2.13
RFNG-205ENST00000580793 WDR97A6NE52 1622 aa28.32■■■□□ 2.12
RFNG-205ENST00000580793 ZNF608Q9ULD9 1512 aaPredicted RBP28.3■■■□□ 2.12
RFNG-205ENST00000580793 TDRD9Q8NDG6 1382 aaKnown RBP28.3■■■□□ 2.12
RFNG-205ENST00000580793 ABCA10Q8WWZ4 1543 aa28.3■■■□□ 2.12
RFNG-205ENST00000580793 AQRO60306 1485 aaKnown RBP eCLIP28.25■■■□□ 2.115e-9■■■■■ 26.9
RFNG-205ENST00000580793 KIF21BO75037 1637 aa28.24■■■□□ 2.11
RFNG-205ENST00000580793 GOLGA3Q08378 1498 aa28.16■■■□□ 2.1
RFNG-205ENST00000580793 GAPVD1Q14C86 1478 aa28.15■■■□□ 2.1
RFNG-205ENST00000580793 ABCA5Q8WWZ7 1642 aa28.14■■■□□ 2.1
RFNG-205ENST00000580793 EIF4G3O43432 1585 aaKnown RBP28.12■■■□□ 2.09
RFNG-205ENST00000580793 PRXQ9BXM0 1461 aa28.1■■■□□ 2.09
RFNG-205ENST00000580793 RAPGEF2Q9Y4G8 1499 aa28.1■■■□□ 2.09
RFNG-205ENST00000580793 IGF1RP08069 1367 aa28.09■■■□□ 2.09
RFNG-205ENST00000580793 GRIN2BQ13224 1484 aa28.08■■■□□ 2.09
RFNG-205ENST00000580793 ERICH3Q5RHP9 1530 aa28.06■■■□□ 2.08
RFNG-205ENST00000580793 UBTFP17480 764 aaKnown RBP28.03■■■□□ 2.08
RFNG-205ENST00000580793 PBRM1Q86U86 1689 aa28■■■□□ 2.07
RFNG-205ENST00000580793 TNIKQ9UKE5 1360 aa27.99■■■□□ 2.07
RFNG-205ENST00000580793 CUL7Q14999 1698 aa27.98■■■□□ 2.07
RFNG-205ENST00000580793 CARMIL1Q5VZK9 1371 aa27.96■■■□□ 2.07
RFNG-205ENST00000580793 SNAPC4Q5SXM2 1469 aa27.94■■■□□ 2.06
RFNG-205ENST00000580793 MAGI1Q96QZ7 1491 aaPredicted RBP27.94■■■□□ 2.06
RFNG-205ENST00000580793 FBLN2P98095 1184 aa27.9■■■□□ 2.06
RFNG-205ENST00000580793 CHMP7Q8WUX9 453 aaPredicted RBP27.9■■■□□ 2.06
RFNG-205ENST00000580793 CEP162Q5TB80 1403 aa27.88■■■□□ 2.05
RFNG-205ENST00000580793 FHAD1B1AJZ9 1412 aa27.85■■■□□ 2.05
RFNG-205ENST00000580793 SYNJ2O15056 1496 aa27.84■■■□□ 2.05
RFNG-205ENST00000580793 OSCARQ8IYS5 282 aa27.81■■■□□ 2.04
RFNG-205ENST00000580793 ADAMTS12P58397 1594 aa27.8■■■□□ 2.04
RFNG-205ENST00000580793 CLIP1P30622 1438 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms