RNA–Protein interactions for RNA: ENST00000579784.1

MIR4539-201, Transcript of microRNA 4539, humanhuman

BASIC

Gene MIR4539, Length 60 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR4539-201ENST00000579784 NISCHQ9Y2I1 1504 aa31.27■■■□□ 2.6
MIR4539-201ENST00000579784 CCDC180Q9P1Z9 1646 aa27.84■■■□□ 2.05
MIR4539-201ENST00000579784 ABCC9O60706 1549 aa27.03■■□□□ 1.92
MIR4539-201ENST00000579784 NACADO15069 1562 aa26.15■■□□□ 1.78
MIR4539-201ENST00000579784 RB1CC1Q8TDY2 1594 aa26.14■■□□□ 1.78
MIR4539-201ENST00000579784 MYO15BQ96JP2 1530 aa26.09■■□□□ 1.77
MIR4539-201ENST00000579784 ZCCHC6Q5VYS8 1495 aaKnown RBP26.09■■□□□ 1.77
MIR4539-201ENST00000579784 DCAF1Q9Y4B6 1507 aa25.98■■□□□ 1.75
MIR4539-201ENST00000579784 DCAF8L2P0C7V8 631 aa25.89■■□□□ 1.74
MIR4539-201ENST00000579784 UNC13AQ9UPW8 1703 aa25.48■■□□□ 1.67
MIR4539-201ENST00000579784 BICRAQ9NZM4 1560 aa25.31■■□□□ 1.64
MIR4539-201ENST00000579784 SCRIBQ14160 1630 aa25.26■■□□□ 1.63
MIR4539-201ENST00000579784 SHROOM4Q9ULL8 1493 aa25.21■■□□□ 1.63
MIR4539-201ENST00000579784 PABPN1Q86U42 306 aaKnown RBP eCLIP25.2■■□□□ 1.62
MIR4539-201ENST00000579784 DNAJC5BQ9UF47 199 aa24.72■■□□□ 1.55
MIR4539-201ENST00000579784 EIF4G1Q04637 1599 aaKnown RBP24.65■■□□□ 1.54
MIR4539-201ENST00000579784 CC2D2AQ9P2K1 1620 aa24.5■■□□□ 1.51
MIR4539-201ENST00000579784 CECR2Q9BXF3 1484 aa24.33■■□□□ 1.49
MIR4539-201ENST00000579784 BAZ1AQ9NRL2 1556 aaPredicted RBP24.25■■□□□ 1.47
MIR4539-201ENST00000579784 SMARCA4P51532 1647 aa24.24■■□□□ 1.47
MIR4539-201ENST00000579784 NCAPD3P42695 1498 aa24.12■■□□□ 1.45
MIR4539-201ENST00000579784 SMARCA2P51531 1590 aa24.12■■□□□ 1.45
MIR4539-201ENST00000579784 ATAD2BQ9ULI0 1458 aa24.1■■□□□ 1.45
MIR4539-201ENST00000579784 PEG3Q9GZU2 1588 aa24.08■■□□□ 1.45
MIR4539-201ENST00000579784 MROH2BQ7Z745 1585 aa24.05■■□□□ 1.44
MIR4539-201ENST00000579784 HMGXB3Q12766 1538 aa24.03■■□□□ 1.44
MIR4539-201ENST00000579784 BAZ1BQ9UIG0 1483 aaKnown RBP23.89■■□□□ 1.42
MIR4539-201ENST00000579784 RSF1Q96T23 1441 aaPredicted RBP23.81■■□□□ 1.4
MIR4539-201ENST00000579784 WIZO95785 1651 aa23.76■■□□□ 1.39
MIR4539-201ENST00000579784 TOP2AP11388 1531 aaKnown RBP23.6■■□□□ 1.37
MIR4539-201ENST00000579784 LAMC3Q9Y6N6 1575 aa23.48■■□□□ 1.35
MIR4539-201ENST00000579784 NESP48681 1621 aa23.4■■□□□ 1.34
MIR4539-201ENST00000579784 CADPSQ9ULU8 1353 aa23.38■■□□□ 1.33
MIR4539-201ENST00000579784 ERCC6Q03468 1493 aa23.33■■□□□ 1.33
MIR4539-201ENST00000579784 PDS5BQ9NTI5 1447 aa23.29■■□□□ 1.32
MIR4539-201ENST00000579784 CFTRP13569 1480 aa23.28■■□□□ 1.32
MIR4539-201ENST00000579784 CCDC88BA6NC98 1476 aa23.26■■□□□ 1.31
MIR4539-201ENST00000579784 CUX2O14529 1486 aa23.16■■□□□ 1.3
MIR4539-201ENST00000579784 KIF21AQ7Z4S6 1674 aa23.16■■□□□ 1.3
MIR4539-201ENST00000579784 THOC2Q8NI27 1593 aaKnown RBP23.13■■□□□ 1.29
MIR4539-201ENST00000579784 PRDM2Q13029 1718 aa23.11■■□□□ 1.29
MIR4539-201ENST00000579784 SUPT5HO00267 1087 aaKnown RBP23.09■■□□□ 1.29
MIR4539-201ENST00000579784 FANCD2Q9BXW9 1451 aa23.09■■□□□ 1.29
MIR4539-201ENST00000579784 CEP164Q9UPV0 1460 aa23.08■■□□□ 1.29
MIR4539-201ENST00000579784 MRC2Q9UBG0 1479 aa23.04■■□□□ 1.28
MIR4539-201ENST00000579784 WDR62O43379 1518 aa22.99■■□□□ 1.27
MIR4539-201ENST00000579784 URB2Q14146 1524 aaKnown RBP22.85■■□□□ 1.25
MIR4539-201ENST00000579784 ABCC8Q09428 1581 aa22.81■■□□□ 1.24
MIR4539-201ENST00000579784 DNMBPQ6XZF7 1577 aa22.74■■□□□ 1.23
MIR4539-201ENST00000579784 TOPBP1Q92547 1522 aa22.73■■□□□ 1.23
MIR4539-201ENST00000579784 IFT140Q96RY7 1462 aa22.61■■□□□ 1.21
MIR4539-201ENST00000579784 CUX1P39880 1505 aa22.57■■□□□ 1.2
MIR4539-201ENST00000579784 POLA1P09884 1462 aaPredicted RBP22.55■■□□□ 1.2
MIR4539-201ENST00000579784 TARBP1Q13395 1621 aaKnown RBP22.49■■□□□ 1.19
MIR4539-201ENST00000579784 FGD5Q6ZNL6 1462 aa22.48■■□□□ 1.19
MIR4539-201ENST00000579784 WRNQ14191 1432 aaPredicted RBP eCLIP22.46■■□□□ 1.19
MIR4539-201ENST00000579784 WDR97A6NE52 1622 aa22.43■■□□□ 1.18
MIR4539-201ENST00000579784 TOP2BQ02880 1626 aa22.43■■□□□ 1.18
MIR4539-201ENST00000579784 BIVM-ERCC5R4GMW8 1640 aa22.43■■□□□ 1.18
MIR4539-201ENST00000579784 SOGA1O94964 1423 aa22.43■■□□□ 1.18
MIR4539-201ENST00000579784 ZNF608Q9ULD9 1512 aaPredicted RBP22.42■■□□□ 1.18
MIR4539-201ENST00000579784 EIF4G3O43432 1585 aaKnown RBP22.39■■□□□ 1.18
MIR4539-201ENST00000579784 RAD54L2Q9Y4B4 1467 aa22.38■■□□□ 1.17
MIR4539-201ENST00000579784 SYNJ1O43426 1573 aa22.37■■□□□ 1.17
MIR4539-201ENST00000579784 ABCA10Q8WWZ4 1543 aa22.32■■□□□ 1.16
MIR4539-201ENST00000579784 DNAJC5Q9H3Z4 198 aa22.31■■□□□ 1.16
MIR4539-201ENST00000579784 AQRO60306 1485 aaKnown RBP eCLIP22.29■■□□□ 1.16
MIR4539-201ENST00000579784 TDRD9Q8NDG6 1382 aaKnown RBP22.25■■□□□ 1.15
MIR4539-201ENST00000579784 ABCA5Q8WWZ7 1642 aa22.22■■□□□ 1.15
MIR4539-201ENST00000579784 GRIN2BQ13224 1484 aa22.21■■□□□ 1.15
MIR4539-201ENST00000579784 GAPVD1Q14C86 1478 aa22.19■■□□□ 1.14
MIR4539-201ENST00000579784 MAGI1Q96QZ7 1491 aaPredicted RBP22.17■■□□□ 1.14
MIR4539-201ENST00000579784 SNAPC4Q5SXM2 1469 aa22.13■■□□□ 1.13
MIR4539-201ENST00000579784 PBRM1Q86U86 1689 aa22.13■■□□□ 1.13
MIR4539-201ENST00000579784 OSCARQ8IYS5 282 aa22.12■■□□□ 1.13
MIR4539-201ENST00000579784 ERICH3Q5RHP9 1530 aa22.07■■□□□ 1.12
MIR4539-201ENST00000579784 SYNJ2O15056 1496 aa22.07■■□□□ 1.12
MIR4539-201ENST00000579784 CHD1O14646 1710 aa22.06■■□□□ 1.12
MIR4539-201ENST00000579784 KIF27Q86VH2 1401 aa22■■□□□ 1.11
MIR4539-201ENST00000579784 ADAMTS12P58397 1594 aa21.99■■□□□ 1.11
MIR4539-201ENST00000579784 CHMP7Q8WUX9 453 aaPredicted RBP21.97■■□□□ 1.11
MIR4539-201ENST00000579784 FHAD1B1AJZ9 1412 aa21.97■■□□□ 1.11
MIR4539-201ENST00000579784 FBLN2P98095 1184 aa21.95■■□□□ 1.1
MIR4539-201ENST00000579784 GRIN2AQ12879 1464 aa21.91■■□□□ 1.1
MIR4539-201ENST00000579784 CLASP1Q7Z460 1538 aa21.89■■□□□ 1.09
MIR4539-201ENST00000579784 TRIM41Q8WV44 630 aa21.88■■□□□ 1.09
MIR4539-201ENST00000579784 IGF1RP08069 1367 aa21.87■■□□□ 1.09
MIR4539-201ENST00000579784 CUL7Q14999 1698 aa21.87■■□□□ 1.09
MIR4539-201ENST00000579784 NUP160Q12769 1436 aa21.84■■□□□ 1.09
MIR4539-201ENST00000579784 ARHGEF11O15085 1522 aa21.79■■□□□ 1.08
MIR4539-201ENST00000579784 CEP170Q5SW79 1584 aa21.78■■□□□ 1.08
MIR4539-201ENST00000579784 RIMBP3CA6NJZ7 1639 aa21.77■■□□□ 1.07
MIR4539-201ENST00000579784 RIMBP3BA6NNM3 1639 aa21.77■■□□□ 1.07
MIR4539-201ENST00000579784 RIMBP3Q9UFD9 1639 aa21.77■■□□□ 1.07
MIR4539-201ENST00000579784 CARMIL1Q5VZK9 1371 aa21.74■■□□□ 1.07
MIR4539-201ENST00000579784 RUSC2Q8N2Y8 1516 aa21.71■■□□□ 1.07
MIR4539-201ENST00000579784 SHROOM2Q13796 1616 aa21.68■■□□□ 1.06
MIR4539-201ENST00000579784 EEA1Q15075 1411 aa21.66■■□□□ 1.06
MIR4539-201ENST00000579784 CHIC1Q5VXU3 224 aa21.65■■□□□ 1.06
MIR4539-201ENST00000579784 RAPGEF2Q9Y4G8 1499 aa21.64■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms