RNA–Protein interactions for RNA: ENST00000579650.5

PROCA1-208, Transcript of protein interacting with cyclin A1, humanhuman

TSL 1 (best)

Gene PROCA1, Length 1,007 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROCA1-208ENST00000579650 NISCHQ9Y2I1 1504 aa55.22■■■■■ 6.43
PROCA1-208ENST00000579650 CCDC180Q9P1Z9 1646 aa49■■■■■ 5.43
PROCA1-208ENST00000579650 ABCC9O60706 1549 aa47.88■■■■■ 5.26
PROCA1-208ENST00000579650 NACADO15069 1562 aa46.07■■■■■ 4.97
PROCA1-208ENST00000579650 RB1CC1Q8TDY2 1594 aa46.07■■■■■ 4.97
PROCA1-208ENST00000579650 DCAF8L2P0C7V8 631 aa46.03■■■■■ 4.96
PROCA1-208ENST00000579650 ZCCHC6Q5VYS8 1495 aaKnown RBP46.03■■■■■ 4.96
PROCA1-208ENST00000579650 MYO15BQ96JP2 1530 aa45.87■■■■■ 4.93
PROCA1-208ENST00000579650 DCAF1Q9Y4B6 1507 aa45.71■■■■■ 4.91
PROCA1-208ENST00000579650 UNC13AQ9UPW8 1703 aa45.02■■■■■ 4.8
PROCA1-208ENST00000579650 PABPN1Q86U42 306 aaKnown RBP eCLIP44.78■■■■■ 4.76
PROCA1-208ENST00000579650 BICRAQ9NZM4 1560 aa44.74■■■■■ 4.75
PROCA1-208ENST00000579650 SCRIBQ14160 1630 aa44.72■■■■■ 4.75
PROCA1-208ENST00000579650 SHROOM4Q9ULL8 1493 aa44.25■■■■■ 4.67
PROCA1-208ENST00000579650 DNAJC5BQ9UF47 199 aa43.95■■■■■ 4.63
PROCA1-208ENST00000579650 EIF4G1Q04637 1599 aaKnown RBP43.52■■■■■ 4.56
PROCA1-208ENST00000579650 CC2D2AQ9P2K1 1620 aa43.31■■■■■ 4.52
PROCA1-208ENST00000579650 CECR2Q9BXF3 1484 aa43.04■■■■■ 4.48
PROCA1-208ENST00000579650 SMARCA4P51532 1647 aa42.81■■■■■ 4.44
PROCA1-208ENST00000579650 BAZ1AQ9NRL2 1556 aaPredicted RBP42.76■■■■■ 4.44
PROCA1-208ENST00000579650 ATAD2BQ9ULI0 1458 aa42.58■■■■■ 4.41
PROCA1-208ENST00000579650 MROH2BQ7Z745 1585 aa42.57■■■■■ 4.41
PROCA1-208ENST00000579650 NCAPD3P42695 1498 aa42.55■■■■■ 4.4
PROCA1-208ENST00000579650 SMARCA2P51531 1590 aa42.49■■■■■ 4.39
PROCA1-208ENST00000579650 PEG3Q9GZU2 1588 aa42.41■■■■■ 4.38
PROCA1-208ENST00000579650 HMGXB3Q12766 1538 aa42.32■■■■■ 4.37
PROCA1-208ENST00000579650 BAZ1BQ9UIG0 1483 aaKnown RBP42.19■■■■■ 4.34
PROCA1-208ENST00000579650 RSF1Q96T23 1441 aaPredicted RBP42.13■■■■■ 4.34
PROCA1-208ENST00000579650 WIZO95785 1651 aa42.08■■■■■ 4.33
PROCA1-208ENST00000579650 TOP2AP11388 1531 aaKnown RBP41.65■■■■■ 4.26
PROCA1-208ENST00000579650 NESP48681 1621 aa41.49■■■■■ 4.23
PROCA1-208ENST00000579650 LAMC3Q9Y6N6 1575 aa41.35■■■■■ 4.21
PROCA1-208ENST00000579650 CADPSQ9ULU8 1353 aa41.31■■■■■ 4.2
PROCA1-208ENST00000579650 ERCC6Q03468 1493 aa41.22■■■■■ 4.19
PROCA1-208ENST00000579650 CCDC88BA6NC98 1476 aa41.19■■■■■ 4.18
PROCA1-208ENST00000579650 PDS5BQ9NTI5 1447 aa41.09■■■■■ 4.17
PROCA1-208ENST00000579650 CFTRP13569 1480 aa41.09■■■■■ 4.17
PROCA1-208ENST00000579650 SUPT5HO00267 1087 aaKnown RBP41.07■■■■■ 4.17
PROCA1-208ENST00000579650 KIF21AQ7Z4S6 1674 aa40.94■■■■■ 4.15
PROCA1-208ENST00000579650 THOC2Q8NI27 1593 aaKnown RBP40.82■■■■■ 4.13
PROCA1-208ENST00000579650 FANCD2Q9BXW9 1451 aa40.81■■■■■ 4.12
PROCA1-208ENST00000579650 CUX2O14529 1486 aa40.79■■■■■ 4.12
PROCA1-208ENST00000579650 CEP164Q9UPV0 1460 aa40.73■■■■■ 4.11
PROCA1-208ENST00000579650 PRDM2Q13029 1718 aa40.68■■■■■ 4.1
PROCA1-208ENST00000579650 MRC2Q9UBG0 1479 aa40.67■■■■■ 4.1
PROCA1-208ENST00000579650 WDR62O43379 1518 aa40.54■■■■■ 4.08
PROCA1-208ENST00000579650 URB2Q14146 1524 aaKnown RBP40.42■■■■■ 4.06
PROCA1-208ENST00000579650 TOPBP1Q92547 1522 aa40.18■■■■■ 4.02
PROCA1-208ENST00000579650 ABCC8Q09428 1581 aa40.14■■■■■ 4.02
PROCA1-208ENST00000579650 DNMBPQ6XZF7 1577 aa40.12■■■■■ 4.01
PROCA1-208ENST00000579650 CUX1P39880 1505 aa39.93■■■■□ 3.98
PROCA1-208ENST00000579650 IFT140Q96RY7 1462 aa39.89■■■■□ 3.98
PROCA1-208ENST00000579650 POLA1P09884 1462 aaPredicted RBP39.85■■■■□ 3.97
PROCA1-208ENST00000579650 FGD5Q6ZNL6 1462 aa39.75■■■■□ 3.95
PROCA1-208ENST00000579650 TARBP1Q13395 1621 aaKnown RBP39.73■■■■□ 3.95
PROCA1-208ENST00000579650 ZNF608Q9ULD9 1512 aaPredicted RBP39.73■■■■□ 3.95
PROCA1-208ENST00000579650 RAD54L2Q9Y4B4 1467 aa39.68■■■■□ 3.94
PROCA1-208ENST00000579650 SOGA1O94964 1423 aa39.68■■■■□ 3.94
PROCA1-208ENST00000579650 WRNQ14191 1432 aaPredicted RBP eCLIP39.68■■■■□ 3.94
PROCA1-208ENST00000579650 SYNJ1O43426 1573 aa39.59■■■■□ 3.93
PROCA1-208ENST00000579650 TOP2BQ02880 1626 aa39.58■■■■□ 3.93
PROCA1-208ENST00000579650 BIVM-ERCC5R4GMW8 1640 aa39.57■■■■□ 3.92
PROCA1-208ENST00000579650 EIF4G3O43432 1585 aaKnown RBP39.53■■■■□ 3.92
PROCA1-208ENST00000579650 AQRO60306 1485 aaKnown RBP eCLIP39.51■■■■□ 3.92
PROCA1-208ENST00000579650 DNAJC5Q9H3Z4 198 aa39.46■■■■□ 3.91
PROCA1-208ENST00000579650 TDRD9Q8NDG6 1382 aaKnown RBP39.46■■■■□ 3.91
PROCA1-208ENST00000579650 WDR97A6NE52 1622 aa39.4■■■■□ 3.9
PROCA1-208ENST00000579650 ABCA10Q8WWZ4 1543 aa39.4■■■■□ 3.9
PROCA1-208ENST00000579650 GAPVD1Q14C86 1478 aa39.22■■■■□ 3.87
PROCA1-208ENST00000579650 ABCA5Q8WWZ7 1642 aa39.21■■■■□ 3.87
PROCA1-208ENST00000579650 GRIN2BQ13224 1484 aa39.2■■■■□ 3.87
PROCA1-208ENST00000579650 SNAPC4Q5SXM2 1469 aa39.13■■■■□ 3.85
PROCA1-208ENST00000579650 OSCARQ8IYS5 282 aa39.12■■■■□ 3.85
PROCA1-208ENST00000579650 MAGI1Q96QZ7 1491 aaPredicted RBP39.08■■■■□ 3.85
PROCA1-208ENST00000579650 PBRM1Q86U86 1689 aa39.08■■■■□ 3.85
PROCA1-208ENST00000579650 CHD1O14646 1710 aa38.99■■■■□ 3.83
PROCA1-208ENST00000579650 FBLN2P98095 1184 aa38.96■■■■□ 3.83
PROCA1-208ENST00000579650 SYNJ2O15056 1496 aa38.93■■■■□ 3.82
PROCA1-208ENST00000579650 ERICH3Q5RHP9 1530 aa38.9■■■■□ 3.82
PROCA1-208ENST00000579650 CHMP7Q8WUX9 453 aaPredicted RBP38.89■■■■□ 3.82
PROCA1-208ENST00000579650 KIF27Q86VH2 1401 aa38.83■■■■□ 3.81
PROCA1-208ENST00000579650 ADAMTS12P58397 1594 aa38.82■■■■□ 3.81
PROCA1-208ENST00000579650 TRIM41Q8WV44 630 aa38.78■■■■□ 3.8
PROCA1-208ENST00000579650 FHAD1B1AJZ9 1412 aa38.78■■■■□ 3.8
PROCA1-208ENST00000579650 IGF1RP08069 1367 aa38.72■■■■□ 3.79
PROCA1-208ENST00000579650 GRIN2AQ12879 1464 aa38.69■■■■□ 3.78
PROCA1-208ENST00000579650 CLASP1Q7Z460 1538 aa38.63■■■■□ 3.78
PROCA1-208ENST00000579650 RUSC2Q8N2Y8 1516 aa38.56■■■■□ 3.76
PROCA1-208ENST00000579650 NUP160Q12769 1436 aa38.55■■■■□ 3.76
PROCA1-208ENST00000579650 CUL7Q14999 1698 aa38.53■■■■□ 3.76
PROCA1-208ENST00000579650 CEP170Q5SW79 1584 aa38.51■■■■□ 3.76
PROCA1-208ENST00000579650 ARHGEF11O15085 1522 aa38.49■■■■□ 3.75
PROCA1-208ENST00000579650 RIMBP3CA6NJZ7 1639 aa38.47■■■■□ 3.75
PROCA1-208ENST00000579650 RIMBP3BA6NNM3 1639 aa38.47■■■■□ 3.75
PROCA1-208ENST00000579650 RIMBP3Q9UFD9 1639 aa38.47■■■■□ 3.75
PROCA1-208ENST00000579650 CARMIL1Q5VZK9 1371 aa38.46■■■■□ 3.75
PROCA1-208ENST00000579650 CHIC1Q5VXU3 224 aa38.45■■■■□ 3.75
PROCA1-208ENST00000579650 RAPGEF2Q9Y4G8 1499 aa38.23■■■■□ 3.71
PROCA1-208ENST00000579650 SHROOM2Q13796 1616 aa38.23■■■■□ 3.71
PROCA1-208ENST00000579650 ARAP1Q96P48 1450 aa38.22■■■■□ 3.71
Retrieved 100 of 20,778 RNA–protein pairs in 171.7 ms