RNA–Protein interactions for RNA: ENST00000579438.1

AC005549.1-201, humanhuman

BASIC

Gene AC005549.1, Length 1,629 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005549.1-201ENST00000579438 NISCHQ9Y2I1 1504 aa30.75■■■□□ 2.51
AC005549.1-201ENST00000579438 CCDC180Q9P1Z9 1646 aa27.19■■□□□ 1.94
AC005549.1-201ENST00000579438 ABCC9O60706 1549 aa26.04■■□□□ 1.76
AC005549.1-201ENST00000579438 ZCCHC6Q5VYS8 1495 aaKnown RBP25.74■■□□□ 1.71
AC005549.1-201ENST00000579438 DCAF1Q9Y4B6 1507 aa25.52■■□□□ 1.68
AC005549.1-201ENST00000579438 MYO15BQ96JP2 1530 aa25.43■■□□□ 1.66
AC005549.1-201ENST00000579438 NACADO15069 1562 aa25.36■■□□□ 1.65
AC005549.1-201ENST00000579438 DCAF8L2P0C7V8 631 aa25.33■■□□□ 1.65
AC005549.1-201ENST00000579438 RB1CC1Q8TDY2 1594 aa25.25■■□□□ 1.63
AC005549.1-201ENST00000579438 UNC13AQ9UPW8 1703 aa24.77■■□□□ 1.56
AC005549.1-201ENST00000579438 SCRIBQ14160 1630 aa24.74■■□□□ 1.55
AC005549.1-201ENST00000579438 SHROOM4Q9ULL8 1493 aa24.51■■□□□ 1.51
AC005549.1-201ENST00000579438 BICRAQ9NZM4 1560 aa24.45■■□□□ 1.5
AC005549.1-201ENST00000579438 DNAJC5BQ9UF47 199 aa24.36■■□□□ 1.49
AC005549.1-201ENST00000579438 PABPN1Q86U42 306 aaKnown RBP eCLIP24.26■■□□□ 1.47
AC005549.1-201ENST00000579438 CECR2Q9BXF3 1484 aa23.83■■□□□ 1.41
AC005549.1-201ENST00000579438 BAZ1AQ9NRL2 1556 aaPredicted RBP23.82■■□□□ 1.4
AC005549.1-201ENST00000579438 SMARCA4P51532 1647 aa23.76■■□□□ 1.39
AC005549.1-201ENST00000579438 EIF4G1Q04637 1599 aaKnown RBP23.76■■□□□ 1.39
AC005549.1-201ENST00000579438 MROH2BQ7Z745 1585 aa23.68■■□□□ 1.38
AC005549.1-201ENST00000579438 RSF1Q96T23 1441 aaPredicted RBP23.6■■□□□ 1.37
AC005549.1-201ENST00000579438 PEG3Q9GZU2 1588 aa23.56■■□□□ 1.36
AC005549.1-201ENST00000579438 CC2D2AQ9P2K1 1620 aa23.52■■□□□ 1.36
AC005549.1-201ENST00000579438 WIZO95785 1651 aa23.5■■□□□ 1.35
AC005549.1-201ENST00000579438 SMARCA2P51531 1590 aa23.49■■□□□ 1.35
AC005549.1-201ENST00000579438 ATAD2BQ9ULI0 1458 aa23.44■■□□□ 1.34
AC005549.1-201ENST00000579438 NCAPD3P42695 1498 aa23.36■■□□□ 1.33
AC005549.1-201ENST00000579438 SUPT5HO00267 1087 aaKnown RBP23.36■■□□□ 1.33
AC005549.1-201ENST00000579438 HMGXB3Q12766 1538 aa23.33■■□□□ 1.33
AC005549.1-201ENST00000579438 BAZ1BQ9UIG0 1483 aaKnown RBP23.28■■□□□ 1.32
AC005549.1-201ENST00000579438 TOP2AP11388 1531 aaKnown RBP23.27■■□□□ 1.32
AC005549.1-201ENST00000579438 CCDC88BA6NC98 1476 aa22.96■■□□□ 1.27
AC005549.1-201ENST00000579438 PRDM2Q13029 1718 aa22.73■■□□□ 1.23
AC005549.1-201ENST00000579438 LAMC3Q9Y6N6 1575 aa22.7■■□□□ 1.22
AC005549.1-201ENST00000579438 CFTRP13569 1480 aa22.69■■□□□ 1.22
AC005549.1-201ENST00000579438 CADPSQ9ULU8 1353 aa22.68■■□□□ 1.22
AC005549.1-201ENST00000579438 NESP48681 1621 aa22.57■■□□□ 1.2
AC005549.1-201ENST00000579438 ERCC6Q03468 1493 aa22.51■■□□□ 1.19
AC005549.1-201ENST00000579438 PDS5BQ9NTI5 1447 aa22.46■■□□□ 1.19
AC005549.1-201ENST00000579438 CUX2O14529 1486 aa22.46■■□□□ 1.19
AC005549.1-201ENST00000579438 KIF21AQ7Z4S6 1674 aa22.43■■□□□ 1.18
AC005549.1-201ENST00000579438 FANCD2Q9BXW9 1451 aa22.42■■□□□ 1.18
AC005549.1-201ENST00000579438 DNAJC5Q9H3Z4 198 aa22.39■■□□□ 1.18
AC005549.1-201ENST00000579438 CEP164Q9UPV0 1460 aa22.36■■□□□ 1.17
AC005549.1-201ENST00000579438 ABCC8Q09428 1581 aa22.3■■□□□ 1.16
AC005549.1-201ENST00000579438 WRNQ14191 1432 aaPredicted RBP eCLIP22.25■■□□□ 1.15
AC005549.1-201ENST00000579438 BIVM-ERCC5R4GMW8 1640 aa22.22■■□□□ 1.15
AC005549.1-201ENST00000579438 TOP2BQ02880 1626 aa22.2■■□□□ 1.14
AC005549.1-201ENST00000579438 DNMBPQ6XZF7 1577 aa22.2■■□□□ 1.14
AC005549.1-201ENST00000579438 MRC2Q9UBG0 1479 aa22.2■■□□□ 1.14
AC005549.1-201ENST00000579438 THOC2Q8NI27 1593 aaKnown RBP22.19■■□□□ 1.14
AC005549.1-201ENST00000579438 SYNJ1O43426 1573 aa22.19■■□□□ 1.14
AC005549.1-201ENST00000579438 CUX1P39880 1505 aa22.19■■□□□ 1.14
AC005549.1-201ENST00000579438 CHIC1Q5VXU3 224 aa22.17■■□□□ 1.14
AC005549.1-201ENST00000579438 URB2Q14146 1524 aaKnown RBP22.16■■□□□ 1.14
AC005549.1-201ENST00000579438 WDR62O43379 1518 aa22.15■■□□□ 1.14
AC005549.1-201ENST00000579438 TOPBP1Q92547 1522 aa22.15■■□□□ 1.14
AC005549.1-201ENST00000579438 TRIM41Q8WV44 630 aa22.08■■□□□ 1.13
AC005549.1-201ENST00000579438 FGD5Q6ZNL6 1462 aa22.02■■□□□ 1.11
AC005549.1-201ENST00000579438 POLA1P09884 1462 aaPredicted RBP21.99■■□□□ 1.11
AC005549.1-201ENST00000579438 WDR97A6NE52 1622 aa21.9■■□□□ 1.1
AC005549.1-201ENST00000579438 TARBP1Q13395 1621 aaKnown RBP21.9■■□□□ 1.1
AC005549.1-201ENST00000579438 SOGA1O94964 1423 aa21.89■■□□□ 1.09
AC005549.1-201ENST00000579438 IFT140Q96RY7 1462 aa21.86■■□□□ 1.09
AC005549.1-201ENST00000579438 ABCA10Q8WWZ4 1543 aa21.86■■□□□ 1.09
AC005549.1-201ENST00000579438 RAD54L2Q9Y4B4 1467 aa21.85■■□□□ 1.09
AC005549.1-201ENST00000579438 ABCA5Q8WWZ7 1642 aa21.76■■□□□ 1.07
AC005549.1-201ENST00000579438 EEA1Q15075 1411 aa21.75■■□□□ 1.07
AC005549.1-201ENST00000579438 KIF27Q86VH2 1401 aa21.74■■□□□ 1.07
AC005549.1-201ENST00000579438 EIF4G3O43432 1585 aaKnown RBP21.7■■□□□ 1.06
AC005549.1-201ENST00000579438 RUSC2Q8N2Y8 1516 aa21.69■■□□□ 1.06
AC005549.1-201ENST00000579438 ZNF608Q9ULD9 1512 aaPredicted RBP21.68■■□□□ 1.06
AC005549.1-201ENST00000579438 PBRM1Q86U86 1689 aa21.68■■□□□ 1.06
AC005549.1-201ENST00000579438 GAPVD1Q14C86 1478 aa21.67■■□□□ 1.06
AC005549.1-201ENST00000579438 TDRD9Q8NDG6 1382 aaKnown RBP21.66■■□□□ 1.06
AC005549.1-201ENST00000579438 ERICH3Q5RHP9 1530 aa21.63■■□□□ 1.05
AC005549.1-201ENST00000579438 AQRO60306 1485 aaKnown RBP eCLIP21.62■■□□□ 1.05
AC005549.1-201ENST00000579438 GRIN2BQ13224 1484 aa21.59■■□□□ 1.05
AC005549.1-201ENST00000579438 CUL7Q14999 1698 aa21.58■■□□□ 1.05
AC005549.1-201ENST00000579438 CSRNP3Q8WYN3 585 aa21.56■■□□□ 1.04
AC005549.1-201ENST00000579438 IGF1RP08069 1367 aa21.56■■□□□ 1.04
AC005549.1-201ENST00000579438 FAM9AQ8IZU1 332 aaPredicted RBP21.54■■□□□ 1.04
AC005549.1-201ENST00000579438 KIF21BO75037 1637 aa21.5■■□□□ 1.03
AC005549.1-201ENST00000579438 MAGI1Q96QZ7 1491 aaPredicted RBP21.49■■□□□ 1.03
AC005549.1-201ENST00000579438 ADAMTS12P58397 1594 aa21.48■■□□□ 1.03
AC005549.1-201ENST00000579438 PRXQ9BXM0 1461 aa21.48■■□□□ 1.03
AC005549.1-201ENST00000579438 OSCARQ8IYS5 282 aa21.47■■□□□ 1.03
AC005549.1-201ENST00000579438 SNAPC4Q5SXM2 1469 aa21.45■■□□□ 1.02
AC005549.1-201ENST00000579438 CARMIL1Q5VZK9 1371 aa21.44■■□□□ 1.02
AC005549.1-201ENST00000579438 FHAD1B1AJZ9 1412 aa21.43■■□□□ 1.02
AC005549.1-201ENST00000579438 RAPGEF2Q9Y4G8 1499 aa21.41■■□□□ 1.02
AC005549.1-201ENST00000579438 SYNJ2O15056 1496 aa21.39■■□□□ 1.01
AC005549.1-201ENST00000579438 GOLGA3Q08378 1498 aa21.37■■□□□ 1.01
AC005549.1-201ENST00000579438 CHD1O14646 1710 aa21.35■■□□□ 1.01
AC005549.1-201ENST00000579438 GRIN2AQ12879 1464 aa21.32■■□□□ 1
AC005549.1-201ENST00000579438 CTTNBP2Q8WZ74 1663 aa21.3■■□□□ 1
AC005549.1-201ENST00000579438 CHMP7Q8WUX9 453 aaPredicted RBP21.27■■□□□ 1
AC005549.1-201ENST00000579438 LOC105371045A0A1W2PR82 267 aa21.22■□□□□ 0.99
AC005549.1-201ENST00000579438 FBLN2P98095 1184 aa21.21■□□□□ 0.99
AC005549.1-201ENST00000579438 CEP170Q5SW79 1584 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms