RNA–Protein interactions for RNA: ENST00000579365.5

PSMD12-205, Transcript of proteasome 26S subunit, non-ATPase 12, humanhuman

TSL 4

Gene PSMD12, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD12-205ENST00000579365 NISCHQ9Y2I1 1504 aa49.25■■■■■ 5.48
PSMD12-205ENST00000579365 CCDC180Q9P1Z9 1646 aa43.7■■■■■ 4.59
PSMD12-205ENST00000579365 ABCC9O60706 1549 aa42.8■■■■■ 4.44
PSMD12-205ENST00000579365 NACADO15069 1562 aa41.12■■■■■ 4.17
PSMD12-205ENST00000579365 RB1CC1Q8TDY2 1594 aa41.12■■■■■ 4.17
PSMD12-205ENST00000579365 DCAF8L2P0C7V8 631 aa41.03■■■■■ 4.16
PSMD12-205ENST00000579365 ZCCHC6Q5VYS8 1495 aaKnown RBP41.02■■■■■ 4.16
PSMD12-205ENST00000579365 MYO15BQ96JP2 1530 aa40.94■■■■■ 4.14
PSMD12-205ENST00000579365 DCAF1Q9Y4B6 1507 aa40.76■■■■■ 4.12
PSMD12-205ENST00000579365 UNC13AQ9UPW8 1703 aa40.22■■■■■ 4.03
PSMD12-205ENST00000579365 PABPN1Q86U42 306 aaKnown RBP eCLIP40.03■■■■■ 4
PSMD12-205ENST00000579365 BICRAQ9NZM4 1560 aa40.01■■■■■ 4
PSMD12-205ENST00000579365 SCRIBQ14160 1630 aa39.85■■■■□ 3.97
PSMD12-205ENST00000579365 SHROOM4Q9ULL8 1493 aa39.5■■■■□ 3.91
PSMD12-205ENST00000579365 DNAJC5BQ9UF47 199 aa39.47■■■■□ 3.91
PSMD12-205ENST00000579365 EIF4G1Q04637 1599 aaKnown RBP38.88■■■■□ 3.81
PSMD12-205ENST00000579365 CC2D2AQ9P2K1 1620 aa38.71■■■■□ 3.79
PSMD12-205ENST00000579365 CECR2Q9BXF3 1484 aa38.47■■■■□ 3.75
PSMD12-205ENST00000579365 SMARCA4P51532 1647 aa38.16■■■■□ 3.7
PSMD12-205ENST00000579365 BAZ1AQ9NRL2 1556 aaPredicted RBP38.1■■■■□ 3.69
PSMD12-205ENST00000579365 NCAPD3P42695 1498 aa38.03■■■■□ 3.68
PSMD12-205ENST00000579365 ATAD2BQ9ULI0 1458 aa38.03■■■■□ 3.68
PSMD12-205ENST00000579365 MROH2BQ7Z745 1585 aa37.97■■■■□ 3.67
PSMD12-205ENST00000579365 SMARCA2P51531 1590 aa37.89■■■■□ 3.66
PSMD12-205ENST00000579365 PEG3Q9GZU2 1588 aa37.85■■■■□ 3.65
PSMD12-205ENST00000579365 HMGXB3Q12766 1538 aa37.77■■■■□ 3.64
PSMD12-205ENST00000579365 BAZ1BQ9UIG0 1483 aaKnown RBP37.62■■■■□ 3.61
PSMD12-205ENST00000579365 RSF1Q96T23 1441 aaPredicted RBP37.56■■■■□ 3.6
PSMD12-205ENST00000579365 WIZO95785 1651 aa37.5■■■■□ 3.59
PSMD12-205ENST00000579365 TOP2AP11388 1531 aaKnown RBP37.1■■■■□ 3.53
PSMD12-205ENST00000579365 NESP48681 1621 aa37.08■■■■□ 3.53
PSMD12-205ENST00000579365 LAMC3Q9Y6N6 1575 aa36.91■■■■□ 3.5
PSMD12-205ENST00000579365 CADPSQ9ULU8 1353 aa36.89■■■■□ 3.5
PSMD12-205ENST00000579365 ERCC6Q03468 1493 aa36.8■■■■□ 3.48
PSMD12-205ENST00000579365 CCDC88BA6NC98 1476 aa36.72■■■■□ 3.47
PSMD12-205ENST00000579365 CFTRP13569 1480 aa36.68■■■■□ 3.46
PSMD12-205ENST00000579365 PDS5BQ9NTI5 1447 aa36.68■■■■□ 3.46
PSMD12-205ENST00000579365 KIF21AQ7Z4S6 1674 aa36.55■■■■□ 3.44
PSMD12-205ENST00000579365 SUPT5HO00267 1087 aaKnown RBP36.49■■■■□ 3.43
PSMD12-205ENST00000579365 CUX2O14529 1486 aa36.49■■■■□ 3.43
PSMD12-205ENST00000579365 THOC2Q8NI27 1593 aaKnown RBP36.49■■■■□ 3.43
PSMD12-205ENST00000579365 FANCD2Q9BXW9 1451 aa36.42■■■■□ 3.42
PSMD12-205ENST00000579365 CEP164Q9UPV0 1460 aa36.33■■■■□ 3.41
PSMD12-205ENST00000579365 MRC2Q9UBG0 1479 aa36.31■■■■□ 3.4
PSMD12-205ENST00000579365 PRDM2Q13029 1718 aa36.25■■■■□ 3.39
PSMD12-205ENST00000579365 WDR62O43379 1518 aa36.22■■■■□ 3.39
PSMD12-205ENST00000579365 URB2Q14146 1524 aaKnown RBP36.1■■■■□ 3.37
PSMD12-205ENST00000579365 TOPBP1Q92547 1522 aa35.86■■■■□ 3.33
PSMD12-205ENST00000579365 ABCC8Q09428 1581 aa35.81■■■■□ 3.32
PSMD12-205ENST00000579365 DNMBPQ6XZF7 1577 aa35.77■■■■□ 3.32
PSMD12-205ENST00000579365 CUX1P39880 1505 aa35.61■■■■□ 3.29
PSMD12-205ENST00000579365 IFT140Q96RY7 1462 aa35.6■■■■□ 3.29
PSMD12-205ENST00000579365 POLA1P09884 1462 aaPredicted RBP35.56■■■■□ 3.28
PSMD12-205ENST00000579365 ZNF608Q9ULD9 1512 aaPredicted RBP35.51■■■■□ 3.27
PSMD12-205ENST00000579365 TARBP1Q13395 1621 aaKnown RBP35.48■■■■□ 3.27
PSMD12-205ENST00000579365 DNAJC5Q9H3Z4 198 aa35.48■■■■□ 3.27
PSMD12-205ENST00000579365 FGD5Q6ZNL6 1462 aa35.45■■■■□ 3.27
PSMD12-205ENST00000579365 RAD54L2Q9Y4B4 1467 aa35.42■■■■□ 3.26
PSMD12-205ENST00000579365 SOGA1O94964 1423 aa35.4■■■■□ 3.26
PSMD12-205ENST00000579365 WRNQ14191 1432 aaPredicted RBP eCLIP35.33■■■■□ 3.25
PSMD12-205ENST00000579365 AQRO60306 1485 aaKnown RBP eCLIP35.29■■■■□ 3.243e-8■■■■■ 30.9
PSMD12-205ENST00000579365 EIF4G3O43432 1585 aaKnown RBP35.27■■■■□ 3.24
PSMD12-205ENST00000579365 SYNJ1O43426 1573 aa35.26■■■■□ 3.24
PSMD12-205ENST00000579365 TOP2BQ02880 1626 aa35.25■■■■□ 3.23
PSMD12-205ENST00000579365 BIVM-ERCC5R4GMW8 1640 aa35.24■■■■□ 3.23
PSMD12-205ENST00000579365 TDRD9Q8NDG6 1382 aaKnown RBP35.23■■■■□ 3.23
PSMD12-205ENST00000579365 WDR97A6NE52 1622 aa35.14■■■■□ 3.22
PSMD12-205ENST00000579365 ABCA10Q8WWZ4 1543 aa35.13■■■■□ 3.21
PSMD12-205ENST00000579365 OSCARQ8IYS5 282 aa35■■■■□ 3.19
PSMD12-205ENST00000579365 GAPVD1Q14C86 1478 aa34.97■■■■□ 3.19
PSMD12-205ENST00000579365 GRIN2BQ13224 1484 aa34.97■■■■□ 3.19
PSMD12-205ENST00000579365 ABCA5Q8WWZ7 1642 aa34.96■■■■□ 3.19
PSMD12-205ENST00000579365 SNAPC4Q5SXM2 1469 aa34.91■■■■□ 3.18
PSMD12-205ENST00000579365 MAGI1Q96QZ7 1491 aaPredicted RBP34.87■■■■□ 3.17
PSMD12-205ENST00000579365 PBRM1Q86U86 1689 aa34.82■■■■□ 3.17
PSMD12-205ENST00000579365 CHD1O14646 1710 aa34.81■■■■□ 3.16
PSMD12-205ENST00000579365 FBLN2P98095 1184 aa34.76■■■■□ 3.16
PSMD12-205ENST00000579365 SYNJ2O15056 1496 aa34.74■■■■□ 3.15
PSMD12-205ENST00000579365 CHMP7Q8WUX9 453 aaPredicted RBP34.7■■■■□ 3.15
PSMD12-205ENST00000579365 ERICH3Q5RHP9 1530 aa34.68■■■■□ 3.14
PSMD12-205ENST00000579365 ADAMTS12P58397 1594 aa34.61■■■■□ 3.13
PSMD12-205ENST00000579365 FHAD1B1AJZ9 1412 aa34.58■■■■□ 3.13
PSMD12-205ENST00000579365 KIF27Q86VH2 1401 aa34.57■■■■□ 3.13
PSMD12-205ENST00000579365 IGF1RP08069 1367 aa34.55■■■■□ 3.12
PSMD12-205ENST00000579365 GRIN2AQ12879 1464 aa34.52■■■■□ 3.12
PSMD12-205ENST00000579365 CLASP1Q7Z460 1538 aa34.52■■■■□ 3.12
PSMD12-205ENST00000579365 TRIM41Q8WV44 630 aa34.46■■■■□ 3.11
PSMD12-205ENST00000579365 NUP160Q12769 1436 aa34.43■■■■□ 3.1
PSMD12-205ENST00000579365 ARHGEF11O15085 1522 aa34.43■■■■□ 3.1
PSMD12-205ENST00000579365 RIMBP3CA6NJZ7 1639 aa34.41■■■■□ 3.1
PSMD12-205ENST00000579365 RIMBP3BA6NNM3 1639 aa34.41■■■■□ 3.1
PSMD12-205ENST00000579365 RIMBP3Q9UFD9 1639 aa34.41■■■■□ 3.1
PSMD12-205ENST00000579365 CEP170Q5SW79 1584 aa34.36■■■■□ 3.09
PSMD12-205ENST00000579365 RUSC2Q8N2Y8 1516 aa34.36■■■■□ 3.09
PSMD12-205ENST00000579365 CUL7Q14999 1698 aa34.29■■■■□ 3.08
PSMD12-205ENST00000579365 CARMIL1Q5VZK9 1371 aa34.27■■■■□ 3.08
PSMD12-205ENST00000579365 ARAP1Q96P48 1450 aa34.19■■■■□ 3.06
PSMD12-205ENST00000579365 CHIC1Q5VXU3 224 aa34.16■■■■□ 3.06
PSMD12-205ENST00000579365 SHROOM2Q13796 1616 aa34.14■■■■□ 3.06
PSMD12-205ENST00000579365 CYB5RLQ6IPT4 315 aa34.11■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms