RNA–Protein interactions for RNA: ENST00000578950.1

PER1-207, Transcript of period circadian regulator 1, humanhuman

TSL 2

Gene PER1, Length 540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PER1-207ENST00000578950 NISCHQ9Y2I1 1504 aa31.84■■■□□ 2.69
PER1-207ENST00000578950 CCDC180Q9P1Z9 1646 aa28.81■■■□□ 2.2
PER1-207ENST00000578950 ABCC9O60706 1549 aa28.78■■■□□ 2.2
PER1-207ENST00000578950 RB1CC1Q8TDY2 1594 aa27.43■■□□□ 1.98
PER1-207ENST00000578950 NACADO15069 1562 aa27.17■■□□□ 1.94
PER1-207ENST00000578950 DNAJC5BQ9UF47 199 aa26.98■■□□□ 1.91
PER1-207ENST00000578950 UNC13AQ9UPW8 1703 aa26.92■■□□□ 1.9
PER1-207ENST00000578950 DCAF8L2P0C7V8 631 aa26.76■■□□□ 1.87
PER1-207ENST00000578950 MYO15BQ96JP2 1530 aa26.74■■□□□ 1.87
PER1-207ENST00000578950 PABPN1Q86U42 306 aaKnown RBP eCLIP26.65■■□□□ 1.86
PER1-207ENST00000578950 BICRAQ9NZM4 1560 aa26.58■■□□□ 1.85
PER1-207ENST00000578950 ZCCHC6Q5VYS8 1495 aaKnown RBP26.39■■□□□ 1.82
PER1-207ENST00000578950 DCAF1Q9Y4B6 1507 aa26.34■■□□□ 1.81
PER1-207ENST00000578950 SHROOM4Q9ULL8 1493 aa26.29■■□□□ 1.8
PER1-207ENST00000578950 SCRIBQ14160 1630 aa26.15■■□□□ 1.78
PER1-207ENST00000578950 CC2D2AQ9P2K1 1620 aa26.06■■□□□ 1.76
PER1-207ENST00000578950 EIF4G1Q04637 1599 aaKnown RBP25.97■■□□□ 1.75
PER1-207ENST00000578950 CECR2Q9BXF3 1484 aa25.95■■□□□ 1.74
PER1-207ENST00000578950 NCAPD3P42695 1498 aa25■■□□□ 1.59
PER1-207ENST00000578950 SMARCA4P51532 1647 aa24.94■■□□□ 1.58
PER1-207ENST00000578950 DNAJC5Q9H3Z4 198 aa24.94■■□□□ 1.58
PER1-207ENST00000578950 CUX2O14529 1486 aa24.94■■□□□ 1.58
PER1-207ENST00000578950 HMGXB3Q12766 1538 aa24.91■■□□□ 1.58
PER1-207ENST00000578950 ATAD2BQ9ULI0 1458 aa24.91■■□□□ 1.58
PER1-207ENST00000578950 SMARCA2P51531 1590 aa24.91■■□□□ 1.58
PER1-207ENST00000578950 ERCC6Q03468 1493 aa24.89■■□□□ 1.58
PER1-207ENST00000578950 BAZ1AQ9NRL2 1556 aaPredicted RBP24.78■■□□□ 1.56
PER1-207ENST00000578950 PEG3Q9GZU2 1588 aa24.71■■□□□ 1.55
PER1-207ENST00000578950 BAZ1BQ9UIG0 1483 aaKnown RBP24.7■■□□□ 1.55
PER1-207ENST00000578950 NESP48681 1621 aa24.67■■□□□ 1.54
PER1-207ENST00000578950 THOC2Q8NI27 1593 aaKnown RBP24.59■■□□□ 1.53
PER1-207ENST00000578950 LAMC3Q9Y6N6 1575 aa24.58■■□□□ 1.52
PER1-207ENST00000578950 MROH2BQ7Z745 1585 aa24.51■■□□□ 1.51
PER1-207ENST00000578950 KIF21AQ7Z4S6 1674 aa24.5■■□□□ 1.51
PER1-207ENST00000578950 PDS5BQ9NTI5 1447 aa24.35■■□□□ 1.49
PER1-207ENST00000578950 WIZO95785 1651 aa24.27■■□□□ 1.48
PER1-207ENST00000578950 CADPSQ9ULU8 1353 aa24.2■■□□□ 1.46
PER1-207ENST00000578950 MRC2Q9UBG0 1479 aa24.19■■□□□ 1.46
PER1-207ENST00000578950 WDR62O43379 1518 aa24.17■■□□□ 1.46
PER1-207ENST00000578950 CEP164Q9UPV0 1460 aa24.07■■□□□ 1.44
PER1-207ENST00000578950 FANCD2Q9BXW9 1451 aa24■■□□□ 1.43
PER1-207ENST00000578950 TOP2AP11388 1531 aaKnown RBP23.96■■□□□ 1.43
PER1-207ENST00000578950 PRDM2Q13029 1718 aa23.95■■□□□ 1.42
PER1-207ENST00000578950 CFTRP13569 1480 aa23.94■■□□□ 1.42
PER1-207ENST00000578950 RSF1Q96T23 1441 aaPredicted RBP23.9■■□□□ 1.42
PER1-207ENST00000578950 URB2Q14146 1524 aaKnown RBP23.8■■□□□ 1.4
PER1-207ENST00000578950 TRIM41Q8WV44 630 aa23.79■■□□□ 1.4
PER1-207ENST00000578950 OSCARQ8IYS5 282 aa23.61■■□□□ 1.37
PER1-207ENST00000578950 CCDC88BA6NC98 1476 aa23.59■■□□□ 1.37
PER1-207ENST00000578950 IFT140Q96RY7 1462 aa23.57■■□□□ 1.36
PER1-207ENST00000578950 TOPBP1Q92547 1522 aa23.53■■□□□ 1.36
PER1-207ENST00000578950 ZNF608Q9ULD9 1512 aaPredicted RBP23.51■■□□□ 1.35
PER1-207ENST00000578950 EIF4G3O43432 1585 aaKnown RBP23.51■■□□□ 1.35
PER1-207ENST00000578950 RIMBP3CA6NJZ7 1639 aa23.51■■□□□ 1.35
PER1-207ENST00000578950 RIMBP3BA6NNM3 1639 aa23.51■■□□□ 1.35
PER1-207ENST00000578950 RIMBP3Q9UFD9 1639 aa23.51■■□□□ 1.35
PER1-207ENST00000578950 DNMBPQ6XZF7 1577 aa23.48■■□□□ 1.35
PER1-207ENST00000578950 ABCC8Q09428 1581 aa23.48■■□□□ 1.35
PER1-207ENST00000578950 CHD1O14646 1710 aa23.4■■□□□ 1.34
PER1-207ENST00000578950 TARBP1Q13395 1621 aaKnown RBP23.38■■□□□ 1.33
PER1-207ENST00000578950 ARHGEF11O15085 1522 aa23.38■■□□□ 1.33
PER1-207ENST00000578950 POLA1P09884 1462 aaPredicted RBP23.28■■□□□ 1.32
PER1-207ENST00000578950 AQRO60306 1485 aaKnown RBP eCLIP23.24■■□□□ 1.313e-6■■■■■ 29.5
PER1-207ENST00000578950 WDR97A6NE52 1622 aa23.21■■□□□ 1.31
PER1-207ENST00000578950 RAD54L2Q9Y4B4 1467 aa23.14■■□□□ 1.29
PER1-207ENST00000578950 ARAP1Q96P48 1450 aa23.12■■□□□ 1.29
PER1-207ENST00000578950 FGD5Q6ZNL6 1462 aa23.11■■□□□ 1.29
PER1-207ENST00000578950 SOGA1O94964 1423 aa23.09■■□□□ 1.29
PER1-207ENST00000578950 SNAPC4Q5SXM2 1469 aa23.08■■□□□ 1.29
PER1-207ENST00000578950 FBLN2P98095 1184 aa23.07■■□□□ 1.28
PER1-207ENST00000578950 CYB5RLQ6IPT4 315 aa23.06■■□□□ 1.28
PER1-207ENST00000578950 CUX1P39880 1505 aa23.06■■□□□ 1.28
PER1-207ENST00000578950 TDRD9Q8NDG6 1382 aaKnown RBP23.05■■□□□ 1.28
PER1-207ENST00000578950 CLASP1Q7Z460 1538 aa23.05■■□□□ 1.28
PER1-207ENST00000578950 PBRM1Q86U86 1689 aa23.04■■□□□ 1.28
PER1-207ENST00000578950 SYNJ1O43426 1573 aa23.04■■□□□ 1.28
PER1-207ENST00000578950 MAGI1Q96QZ7 1491 aaPredicted RBP23.04■■□□□ 1.28
PER1-207ENST00000578950 GRIN2BQ13224 1484 aa22.98■■□□□ 1.27
PER1-207ENST00000578950 SYNJ2O15056 1496 aa22.94■■□□□ 1.26
PER1-207ENST00000578950 ABCA5Q8WWZ7 1642 aa22.9■■□□□ 1.26
PER1-207ENST00000578950 TRHP20396 242 aaPredicted RBP22.89■■□□□ 1.25
PER1-207ENST00000578950 CHMP7Q8WUX9 453 aaPredicted RBP22.89■■□□□ 1.25
PER1-207ENST00000578950 GAPVD1Q14C86 1478 aa22.86■■□□□ 1.25
PER1-207ENST00000578950 ABCA10Q8WWZ4 1543 aa22.84■■□□□ 1.25
PER1-207ENST00000578950 BIVM-ERCC5R4GMW8 1640 aa22.75■■□□□ 1.23
PER1-207ENST00000578950 ADAMTS12P58397 1594 aa22.74■■□□□ 1.23
PER1-207ENST00000578950 TOP2BQ02880 1626 aa22.71■■□□□ 1.23
PER1-207ENST00000578950 GRIN2AQ12879 1464 aa22.7■■□□□ 1.22
PER1-207ENST00000578950 WRNQ14191 1432 aaPredicted RBP eCLIP22.68■■□□□ 1.22
PER1-207ENST00000578950 CEP170Q5SW79 1584 aa22.67■■□□□ 1.22
PER1-207ENST00000578950 ERCC6L2Q5T890 1561 aa22.63■■□□□ 1.21
PER1-207ENST00000578950 SHROOM2Q13796 1616 aa22.62■■□□□ 1.21
PER1-207ENST00000578950 SUPT5HO00267 1087 aaKnown RBP22.62■■□□□ 1.21
PER1-207ENST00000578950 NUP160Q12769 1436 aa22.61■■□□□ 1.21
PER1-207ENST00000578950 ERICH3Q5RHP9 1530 aa22.58■■□□□ 1.21
PER1-207ENST00000578950 FHAD1B1AJZ9 1412 aa22.57■■□□□ 1.2
PER1-207ENST00000578950 KIF13AQ9H1H9 1805 aa22.45■■□□□ 1.19
PER1-207ENST00000578950 RUSC2Q8N2Y8 1516 aa22.44■■□□□ 1.18
PER1-207ENST00000578950 PRG4Q92954 1404 aaPredicted RBP22.37■■□□□ 1.17
PER1-207ENST00000578950 AEBP2Q6ZN18 517 aaPredicted RBP22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms