RNA–Protein interactions for RNA: ENST00000578938.1

HELZ-204, Transcript of helicase with zinc finger, humanhuman

TSL 3

Gene HELZ, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HELZ-204ENST00000578938 NISCHQ9Y2I1 1504 aa25.12■■□□□ 1.61
HELZ-204ENST00000578938 ABCC9O60706 1549 aa22.44■■□□□ 1.18
HELZ-204ENST00000578938 CCDC180Q9P1Z9 1646 aa22.42■■□□□ 1.18
HELZ-204ENST00000578938 AEBP2Q6ZN18 517 aaPredicted RBP21.57■■□□□ 1.04
HELZ-204ENST00000578938 RB1CC1Q8TDY2 1594 aa21.23■□□□□ 0.99
HELZ-204ENST00000578938 DCAF8L2P0C7V8 631 aa21.15■□□□□ 0.98
HELZ-204ENST00000578938 NACADO15069 1562 aa21.1■□□□□ 0.97
HELZ-204ENST00000578938 UNC13AQ9UPW8 1703 aa21.07■□□□□ 0.96
HELZ-204ENST00000578938 DNAJC5BQ9UF47 199 aa21.03■□□□□ 0.96
HELZ-204ENST00000578938 PABPN1Q86U42 306 aaKnown RBP eCLIP20.93■□□□□ 0.94
HELZ-204ENST00000578938 CHIC1Q5VXU3 224 aa20.87■□□□□ 0.93
HELZ-204ENST00000578938 ZCCHC6Q5VYS8 1495 aaKnown RBP20.86■□□□□ 0.93
HELZ-204ENST00000578938 BICRAQ9NZM4 1560 aa20.84■□□□□ 0.93
HELZ-204ENST00000578938 MYO15BQ96JP2 1530 aa20.77■□□□□ 0.92
HELZ-204ENST00000578938 SCRIBQ14160 1630 aa20.63■□□□□ 0.89
HELZ-204ENST00000578938 DCAF1Q9Y4B6 1507 aa20.62■□□□□ 0.89
HELZ-204ENST00000578938 CC2D2AQ9P2K1 1620 aa20.25■□□□□ 0.83
HELZ-204ENST00000578938 EIF4G1Q04637 1599 aaKnown RBP20.21■□□□□ 0.83
HELZ-204ENST00000578938 SHROOM4Q9ULL8 1493 aa20.17■□□□□ 0.82
HELZ-204ENST00000578938 CECR2Q9BXF3 1484 aa20.09■□□□□ 0.81
HELZ-204ENST00000578938 SMARCA4P51532 1647 aa19.61■□□□□ 0.73
HELZ-204ENST00000578938 ATAD2BQ9ULI0 1458 aa19.54■□□□□ 0.72
HELZ-204ENST00000578938 NCAPD3P42695 1498 aa19.5■□□□□ 0.71
HELZ-204ENST00000578938 MROH2BQ7Z745 1585 aa19.48■□□□□ 0.71
HELZ-204ENST00000578938 BAZ1AQ9NRL2 1556 aaPredicted RBP19.41■□□□□ 0.7
HELZ-204ENST00000578938 NESP48681 1621 aa19.4■□□□□ 0.7
HELZ-204ENST00000578938 SMARCA2P51531 1590 aa19.38■□□□□ 0.69
HELZ-204ENST00000578938 HMGXB3Q12766 1538 aa19.38■□□□□ 0.69
HELZ-204ENST00000578938 PEG3Q9GZU2 1588 aa19.32■□□□□ 0.68
HELZ-204ENST00000578938 BAZ1BQ9UIG0 1483 aaKnown RBP19.32■□□□□ 0.68
HELZ-204ENST00000578938 WIZO95785 1651 aa19.3■□□□□ 0.68
HELZ-204ENST00000578938 ERCC6Q03468 1493 aa19.2■□□□□ 0.66
HELZ-204ENST00000578938 KIF21AQ7Z4S6 1674 aa19.15■□□□□ 0.66
HELZ-204ENST00000578938 THOC2Q8NI27 1593 aaKnown RBP19.1■□□□□ 0.65
HELZ-204ENST00000578938 RSF1Q96T23 1441 aaPredicted RBP19.05■□□□□ 0.64
HELZ-204ENST00000578938 CUX2O14529 1486 aa19.04■□□□□ 0.64
HELZ-204ENST00000578938 LAMC3Q9Y6N6 1575 aa19.04■□□□□ 0.64
HELZ-204ENST00000578938 DNAJC5Q9H3Z4 198 aa18.94■□□□□ 0.62
HELZ-204ENST00000578938 CADPSQ9ULU8 1353 aa18.92■□□□□ 0.62
HELZ-204ENST00000578938 TOP2AP11388 1531 aaKnown RBP18.9■□□□□ 0.62
HELZ-204ENST00000578938 PDS5BQ9NTI5 1447 aa18.83■□□□□ 0.61
HELZ-204ENST00000578938 MRC2Q9UBG0 1479 aa18.78■□□□□ 0.6
HELZ-204ENST00000578938 WDR62O43379 1518 aa18.77■□□□□ 0.6
HELZ-204ENST00000578938 FANCD2Q9BXW9 1451 aa18.77■□□□□ 0.59
HELZ-204ENST00000578938 CFTRP13569 1480 aa18.76■□□□□ 0.59
HELZ-204ENST00000578938 CCDC88BA6NC98 1476 aa18.74■□□□□ 0.59
HELZ-204ENST00000578938 CEP164Q9UPV0 1460 aa18.72■□□□□ 0.59
HELZ-204ENST00000578938 URB2Q14146 1524 aaKnown RBP18.7■□□□□ 0.58
HELZ-204ENST00000578938 PRDM2Q13029 1718 aa18.69■□□□□ 0.58
HELZ-204ENST00000578938 ZNF608Q9ULD9 1512 aaPredicted RBP18.49■□□□□ 0.55
HELZ-204ENST00000578938 TOPBP1Q92547 1522 aa18.46■□□□□ 0.55
HELZ-204ENST00000578938 SENP3Q9H4L4 574 aaPredicted RBP18.44■□□□□ 0.54
HELZ-204ENST00000578938 DNMBPQ6XZF7 1577 aa18.37■□□□□ 0.53
HELZ-204ENST00000578938 TARBP1Q13395 1621 aaKnown RBP18.34■□□□□ 0.53
HELZ-204ENST00000578938 EIF4G3O43432 1585 aaKnown RBP18.34■□□□□ 0.53
HELZ-204ENST00000578938 SUPT5HO00267 1087 aaKnown RBP18.34■□□□□ 0.53
HELZ-204ENST00000578938 IFT140Q96RY7 1462 aa18.31■□□□□ 0.52
HELZ-204ENST00000578938 RAD54L2Q9Y4B4 1467 aa18.31■□□□□ 0.52
HELZ-204ENST00000578938 PHF23Q9BUL5 403 aaPredicted RBP18.29■□□□□ 0.52
HELZ-204ENST00000578938 AQRO60306 1485 aaKnown RBP eCLIP18.28■□□□□ 0.52
HELZ-204ENST00000578938 POLA1P09884 1462 aaPredicted RBP18.28■□□□□ 0.52
HELZ-204ENST00000578938 TRIM41Q8WV44 630 aa18.28■□□□□ 0.52
HELZ-204ENST00000578938 CUX1P39880 1505 aa18.27■□□□□ 0.51
HELZ-204ENST00000578938 CHD1O14646 1710 aa18.25■□□□□ 0.51
HELZ-204ENST00000578938 FGD5Q6ZNL6 1462 aa18.21■□□□□ 0.51
HELZ-204ENST00000578938 ABCC8Q09428 1581 aa18.19■□□□□ 0.5
HELZ-204ENST00000578938 OSCARQ8IYS5 282 aa18.18■□□□□ 0.5
HELZ-204ENST00000578938 TDRD9Q8NDG6 1382 aaKnown RBP18.17■□□□□ 0.5
HELZ-204ENST00000578938 RIMBP3CA6NJZ7 1639 aa18.17■□□□□ 0.5
HELZ-204ENST00000578938 RIMBP3BA6NNM3 1639 aa18.17■□□□□ 0.5
HELZ-204ENST00000578938 RIMBP3Q9UFD9 1639 aa18.17■□□□□ 0.5
HELZ-204ENST00000578938 WDR97A6NE52 1622 aa18.15■□□□□ 0.5
HELZ-204ENST00000578938 SOGA1O94964 1423 aa18.13■□□□□ 0.49
HELZ-204ENST00000578938 ARHGEF11O15085 1522 aa18.07■□□□□ 0.48
HELZ-204ENST00000578938 SNAPC4Q5SXM2 1469 aa18.07■□□□□ 0.48
HELZ-204ENST00000578938 SYNJ1O43426 1573 aa18.05■□□□□ 0.48
HELZ-204ENST00000578938 PBRM1Q86U86 1689 aa18.05■□□□□ 0.48
HELZ-204ENST00000578938 FBLN2P98095 1184 aa18.03■□□□□ 0.48
HELZ-204ENST00000578938 ABCA5Q8WWZ7 1642 aa17.98■□□□□ 0.47
HELZ-204ENST00000578938 BIVM-ERCC5R4GMW8 1640 aa17.97■□□□□ 0.47
HELZ-204ENST00000578938 ARAP1Q96P48 1450 aa17.95■□□□□ 0.46
HELZ-204ENST00000578938 CLASP1Q7Z460 1538 aa17.94■□□□□ 0.46
HELZ-204ENST00000578938 TOP2BQ02880 1626 aa17.94■□□□□ 0.46
HELZ-204ENST00000578938 ABCA10Q8WWZ4 1543 aa17.93■□□□□ 0.46
HELZ-204ENST00000578938 GRIN2BQ13224 1484 aa17.92■□□□□ 0.46
HELZ-204ENST00000578938 GAPVD1Q14C86 1478 aa17.92■□□□□ 0.46
HELZ-204ENST00000578938 WRNQ14191 1432 aaPredicted RBP eCLIP17.89■□□□□ 0.45
HELZ-204ENST00000578938 MAGI1Q96QZ7 1491 aaPredicted RBP17.88■□□□□ 0.45
HELZ-204ENST00000578938 CYB5RLQ6IPT4 315 aa17.88■□□□□ 0.45
HELZ-204ENST00000578938 SYNJ2O15056 1496 aa17.86■□□□□ 0.45
HELZ-204ENST00000578938 ERCC6L2Q5T890 1561 aa17.85■□□□□ 0.45
HELZ-204ENST00000578938 ADAMTS12P58397 1594 aa17.83■□□□□ 0.45
HELZ-204ENST00000578938 CHMP7Q8WUX9 453 aaPredicted RBP17.83■□□□□ 0.44
HELZ-204ENST00000578938 CEP170Q5SW79 1584 aa17.81■□□□□ 0.44
HELZ-204ENST00000578938 GRIN2AQ12879 1464 aa17.76■□□□□ 0.43
HELZ-204ENST00000578938 NUP160Q12769 1436 aa17.68■□□□□ 0.42
HELZ-204ENST00000578938 ERICH3Q5RHP9 1530 aa17.67■□□□□ 0.42
HELZ-204ENST00000578938 SHROOM2Q13796 1616 aa17.65■□□□□ 0.42
HELZ-204ENST00000578938 FHAD1B1AJZ9 1412 aa17.64■□□□□ 0.42
HELZ-204ENST00000578938 RUSC2Q8N2Y8 1516 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms