RNA–Protein interactions for RNA: ENST00000578421.1

ACADVL-212, Transcript of acyl-CoA dehydrogenase very long chain, humanhuman

TSL 3

Gene ACADVL, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACADVL-212ENST00000578421 NISCHQ9Y2I1 1504 aa53.45■■■■■ 6.15
ACADVL-212ENST00000578421 CCDC180Q9P1Z9 1646 aa47.38■■■■■ 5.18
ACADVL-212ENST00000578421 ABCC9O60706 1549 aa46.32■■■■■ 5.01
ACADVL-212ENST00000578421 DCAF8L2P0C7V8 631 aa44.73■■■■■ 4.75
ACADVL-212ENST00000578421 ZCCHC6Q5VYS8 1495 aaKnown RBP44.57■■■■■ 4.73
ACADVL-212ENST00000578421 RB1CC1Q8TDY2 1594 aa44.56■■■■■ 4.72
ACADVL-212ENST00000578421 NACADO15069 1562 aa44.54■■■■■ 4.72
ACADVL-212ENST00000578421 MYO15BQ96JP2 1530 aa44.29■■■■■ 4.68
ACADVL-212ENST00000578421 DCAF1Q9Y4B6 1507 aa44.19■■■■■ 4.66
ACADVL-212ENST00000578421 UNC13AQ9UPW8 1703 aa43.49■■■■■ 4.55
ACADVL-212ENST00000578421 SCRIBQ14160 1630 aa43.36■■■■■ 4.53
ACADVL-212ENST00000578421 PABPN1Q86U42 306 aaKnown RBP eCLIP43.35■■■■■ 4.533e-8■■■□□ 16.7
ACADVL-212ENST00000578421 BICRAQ9NZM4 1560 aa43.2■■■■■ 4.51
ACADVL-212ENST00000578421 SHROOM4Q9ULL8 1493 aa42.73■■■■■ 4.43
ACADVL-212ENST00000578421 DNAJC5BQ9UF47 199 aa42.34■■■■■ 4.37
ACADVL-212ENST00000578421 EIF4G1Q04637 1599 aaKnown RBP42.06■■■■■ 4.32
ACADVL-212ENST00000578421 CC2D2AQ9P2K1 1620 aa41.85■■■■■ 4.29
ACADVL-212ENST00000578421 CECR2Q9BXF3 1484 aa41.66■■■■■ 4.26
ACADVL-212ENST00000578421 SMARCA4P51532 1647 aa41.44■■■■■ 4.22
ACADVL-212ENST00000578421 BAZ1AQ9NRL2 1556 aaPredicted RBP41.42■■■■■ 4.22
ACADVL-212ENST00000578421 MROH2BQ7Z745 1585 aa41.22■■■■■ 4.19
ACADVL-212ENST00000578421 ATAD2BQ9ULI0 1458 aa41.18■■■■■ 4.18
ACADVL-212ENST00000578421 SMARCA2P51531 1590 aa41.12■■■■■ 4.17
ACADVL-212ENST00000578421 NCAPD3P42695 1498 aa41.1■■■■■ 4.17
ACADVL-212ENST00000578421 PEG3Q9GZU2 1588 aa40.99■■■■■ 4.15
ACADVL-212ENST00000578421 HMGXB3Q12766 1538 aa40.92■■■■■ 4.14
ACADVL-212ENST00000578421 BAZ1BQ9UIG0 1483 aaKnown RBP40.88■■■■■ 4.13
ACADVL-212ENST00000578421 RSF1Q96T23 1441 aaPredicted RBP40.82■■■■■ 4.12
ACADVL-212ENST00000578421 WIZO95785 1651 aa40.78■■■■■ 4.12
ACADVL-212ENST00000578421 TOP2AP11388 1531 aaKnown RBP40.36■■■■■ 4.05
ACADVL-212ENST00000578421 NESP48681 1621 aa40.13■■■■■ 4.01
ACADVL-212ENST00000578421 SUPT5HO00267 1087 aaKnown RBP40.02■■■■■ 4
ACADVL-212ENST00000578421 LAMC3Q9Y6N6 1575 aa39.98■■■■□ 3.99
ACADVL-212ENST00000578421 CADPSQ9ULU8 1353 aa39.96■■■■□ 3.99
ACADVL-212ENST00000578421 ERCC6Q03468 1493 aa39.93■■■■□ 3.98
ACADVL-212ENST00000578421 CCDC88BA6NC98 1476 aa39.9■■■■□ 3.98
ACADVL-212ENST00000578421 PDS5BQ9NTI5 1447 aa39.76■■■■□ 3.96
ACADVL-212ENST00000578421 CFTRP13569 1480 aa39.74■■■■□ 3.95
ACADVL-212ENST00000578421 KIF21AQ7Z4S6 1674 aa39.6■■■■□ 3.93
ACADVL-212ENST00000578421 FANCD2Q9BXW9 1451 aa39.51■■■■□ 3.92
ACADVL-212ENST00000578421 CEP164Q9UPV0 1460 aa39.43■■■■□ 3.9
ACADVL-212ENST00000578421 THOC2Q8NI27 1593 aaKnown RBP39.42■■■■□ 3.9
ACADVL-212ENST00000578421 PRDM2Q13029 1718 aa39.37■■■■□ 3.89
ACADVL-212ENST00000578421 CUX2O14529 1486 aa39.37■■■■□ 3.89
ACADVL-212ENST00000578421 MRC2Q9UBG0 1479 aa39.34■■■■□ 3.89
ACADVL-212ENST00000578421 WDR62O43379 1518 aa39.18■■■■□ 3.86
ACADVL-212ENST00000578421 URB2Q14146 1524 aaKnown RBP39.09■■■■□ 3.85
ACADVL-212ENST00000578421 TOPBP1Q92547 1522 aa38.89■■■■□ 3.82
ACADVL-212ENST00000578421 ABCC8Q09428 1581 aa38.86■■■■□ 3.81
ACADVL-212ENST00000578421 DNMBPQ6XZF7 1577 aa38.84■■■■□ 3.81
ACADVL-212ENST00000578421 CUX1P39880 1505 aa38.66■■■■□ 3.78
ACADVL-212ENST00000578421 IFT140Q96RY7 1462 aa38.6■■■■□ 3.77
ACADVL-212ENST00000578421 POLA1P09884 1462 aaPredicted RBP38.57■■■■□ 3.76
ACADVL-212ENST00000578421 FGD5Q6ZNL6 1462 aa38.52■■■■□ 3.76
ACADVL-212ENST00000578421 WRNQ14191 1432 aaPredicted RBP eCLIP38.5■■■■□ 3.75
ACADVL-212ENST00000578421 ZNF608Q9ULD9 1512 aaPredicted RBP38.43■■■■□ 3.74
ACADVL-212ENST00000578421 RAD54L2Q9Y4B4 1467 aa38.43■■■■□ 3.74
ACADVL-212ENST00000578421 SOGA1O94964 1423 aa38.43■■■■□ 3.74
ACADVL-212ENST00000578421 TARBP1Q13395 1621 aaKnown RBP38.41■■■■□ 3.74
ACADVL-212ENST00000578421 SYNJ1O43426 1573 aa38.38■■■■□ 3.73
ACADVL-212ENST00000578421 TOP2BQ02880 1626 aa38.35■■■■□ 3.73
ACADVL-212ENST00000578421 BIVM-ERCC5R4GMW8 1640 aa38.32■■■■□ 3.73
ACADVL-212ENST00000578421 EIF4G3O43432 1585 aaKnown RBP38.26■■■■□ 3.72
ACADVL-212ENST00000578421 AQRO60306 1485 aaKnown RBP eCLIP38.24■■■■□ 3.711e-9■■■■□ 25.4
ACADVL-212ENST00000578421 TDRD9Q8NDG6 1382 aaKnown RBP38.22■■■■□ 3.71
ACADVL-212ENST00000578421 ABCA10Q8WWZ4 1543 aa38.12■■■■□ 3.69
ACADVL-212ENST00000578421 WDR97A6NE52 1622 aa38.12■■■■□ 3.69
ACADVL-212ENST00000578421 GAPVD1Q14C86 1478 aa37.98■■■■□ 3.67
ACADVL-212ENST00000578421 DNAJC5Q9H3Z4 198 aa37.98■■■■□ 3.67
ACADVL-212ENST00000578421 GRIN2BQ13224 1484 aa37.95■■■■□ 3.67
ACADVL-212ENST00000578421 ABCA5Q8WWZ7 1642 aa37.94■■■■□ 3.66
ACADVL-212ENST00000578421 SNAPC4Q5SXM2 1469 aa37.9■■■■□ 3.66
ACADVL-212ENST00000578421 PBRM1Q86U86 1689 aa37.85■■■■□ 3.65
ACADVL-212ENST00000578421 FBLN2P98095 1184 aa37.82■■■■□ 3.64
ACADVL-212ENST00000578421 OSCARQ8IYS5 282 aa37.82■■■■□ 3.64
ACADVL-212ENST00000578421 MAGI1Q96QZ7 1491 aaPredicted RBP37.81■■■■□ 3.64
ACADVL-212ENST00000578421 TRIM41Q8WV44 630 aa37.76■■■■□ 3.64
ACADVL-212ENST00000578421 CHD1O14646 1710 aa37.72■■■■□ 3.63
ACADVL-212ENST00000578421 CHMP7Q8WUX9 453 aaPredicted RBP37.7■■■■□ 3.63
ACADVL-212ENST00000578421 KIF27Q86VH2 1401 aa37.69■■■■□ 3.62
ACADVL-212ENST00000578421 SYNJ2O15056 1496 aa37.68■■■■□ 3.62
ACADVL-212ENST00000578421 ERICH3Q5RHP9 1530 aa37.66■■■■□ 3.62
ACADVL-212ENST00000578421 ADAMTS12P58397 1594 aa37.59■■■■□ 3.61
ACADVL-212ENST00000578421 FHAD1B1AJZ9 1412 aa37.55■■■■□ 3.6
ACADVL-212ENST00000578421 IGF1RP08069 1367 aa37.5■■■■□ 3.59
ACADVL-212ENST00000578421 GRIN2AQ12879 1464 aa37.45■■■■□ 3.59
ACADVL-212ENST00000578421 RUSC2Q8N2Y8 1516 aa37.41■■■■□ 3.58
ACADVL-212ENST00000578421 CHIC1Q5VXU3 224 aa37.4■■■■□ 3.58
ACADVL-212ENST00000578421 CUL7Q14999 1698 aa37.34■■■■□ 3.57
ACADVL-212ENST00000578421 CLASP1Q7Z460 1538 aa37.32■■■■□ 3.57
ACADVL-212ENST00000578421 CARMIL1Q5VZK9 1371 aa37.29■■■■□ 3.56
ACADVL-212ENST00000578421 NUP160Q12769 1436 aa37.27■■■■□ 3.56
ACADVL-212ENST00000578421 CEP170Q5SW79 1584 aa37.25■■■■□ 3.55
ACADVL-212ENST00000578421 ARHGEF11O15085 1522 aa37.19■■■■□ 3.54
ACADVL-212ENST00000578421 RIMBP3CA6NJZ7 1639 aa37.15■■■■□ 3.54
ACADVL-212ENST00000578421 RIMBP3BA6NNM3 1639 aa37.15■■■■□ 3.54
ACADVL-212ENST00000578421 RIMBP3Q9UFD9 1639 aa37.15■■■■□ 3.54
ACADVL-212ENST00000578421 RAPGEF2Q9Y4G8 1499 aa37.08■■■■□ 3.53
ACADVL-212ENST00000578421 EEA1Q15075 1411 aa37.05■■■■□ 3.52
ACADVL-212ENST00000578421 FAM9AQ8IZU1 332 aaPredicted RBP37.03■■■■□ 3.52
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms