RNA–Protein interactions for RNA: ENST00000578269.5

ACADVL-210, Transcript of acyl-CoA dehydrogenase very long chain, humanhuman

TSL 2

Gene ACADVL, Length 724 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACADVL-210ENST00000578269 NISCHQ9Y2I1 1504 aa53.75■■■■■ 6.2
ACADVL-210ENST00000578269 CCDC180Q9P1Z9 1646 aa48.02■■■■■ 5.28
ACADVL-210ENST00000578269 ABCC9O60706 1549 aa47.21■■■■■ 5.15
ACADVL-210ENST00000578269 RB1CC1Q8TDY2 1594 aa45.33■■■■■ 4.85
ACADVL-210ENST00000578269 NACADO15069 1562 aa45.19■■■■■ 4.82
ACADVL-210ENST00000578269 DCAF8L2P0C7V8 631 aa44.95■■■■■ 4.79
ACADVL-210ENST00000578269 MYO15BQ96JP2 1530 aa44.81■■■■■ 4.76
ACADVL-210ENST00000578269 ZCCHC6Q5VYS8 1495 aaKnown RBP44.73■■■■■ 4.75
ACADVL-210ENST00000578269 DCAF1Q9Y4B6 1507 aa44.49■■■■■ 4.71
ACADVL-210ENST00000578269 UNC13AQ9UPW8 1703 aa44.31■■■■■ 4.68
ACADVL-210ENST00000578269 PABPN1Q86U42 306 aaKnown RBP eCLIP44■■■■■ 4.633e-8■■■□□ 16.7
ACADVL-210ENST00000578269 BICRAQ9NZM4 1560 aa43.92■■■■■ 4.62
ACADVL-210ENST00000578269 SCRIBQ14160 1630 aa43.74■■■■■ 4.59
ACADVL-210ENST00000578269 DNAJC5BQ9UF47 199 aa43.54■■■■■ 4.56
ACADVL-210ENST00000578269 SHROOM4Q9ULL8 1493 aa43.52■■■■■ 4.56
ACADVL-210ENST00000578269 EIF4G1Q04637 1599 aaKnown RBP42.82■■■■■ 4.45
ACADVL-210ENST00000578269 CC2D2AQ9P2K1 1620 aa42.72■■■■■ 4.43
ACADVL-210ENST00000578269 CECR2Q9BXF3 1484 aa42.48■■■■■ 4.39
ACADVL-210ENST00000578269 SMARCA4P51532 1647 aa41.81■■■■■ 4.28
ACADVL-210ENST00000578269 BAZ1AQ9NRL2 1556 aaPredicted RBP41.71■■■■■ 4.27
ACADVL-210ENST00000578269 NCAPD3P42695 1498 aa41.66■■■■■ 4.26
ACADVL-210ENST00000578269 ATAD2BQ9ULI0 1458 aa41.63■■■■■ 4.25
ACADVL-210ENST00000578269 SMARCA2P51531 1590 aa41.61■■■■■ 4.25
ACADVL-210ENST00000578269 HMGXB3Q12766 1538 aa41.49■■■■■ 4.23
ACADVL-210ENST00000578269 PEG3Q9GZU2 1588 aa41.42■■■■■ 4.22
ACADVL-210ENST00000578269 MROH2BQ7Z745 1585 aa41.4■■■■■ 4.22
ACADVL-210ENST00000578269 BAZ1BQ9UIG0 1483 aaKnown RBP41.3■■■■■ 4.2
ACADVL-210ENST00000578269 WIZO95785 1651 aa40.95■■■■■ 4.15
ACADVL-210ENST00000578269 RSF1Q96T23 1441 aaPredicted RBP40.82■■■■■ 4.12
ACADVL-210ENST00000578269 ERCC6Q03468 1493 aa40.77■■■■■ 4.12
ACADVL-210ENST00000578269 NESP48681 1621 aa40.75■■■■■ 4.11
ACADVL-210ENST00000578269 LAMC3Q9Y6N6 1575 aa40.66■■■■■ 4.1
ACADVL-210ENST00000578269 TOP2AP11388 1531 aaKnown RBP40.53■■■■■ 4.08
ACADVL-210ENST00000578269 CUX2O14529 1486 aa40.47■■■■■ 4.07
ACADVL-210ENST00000578269 CADPSQ9ULU8 1353 aa40.41■■■■■ 4.06
ACADVL-210ENST00000578269 PDS5BQ9NTI5 1447 aa40.37■■■■■ 4.05
ACADVL-210ENST00000578269 KIF21AQ7Z4S6 1674 aa40.33■■■■■ 4.05
ACADVL-210ENST00000578269 THOC2Q8NI27 1593 aaKnown RBP40.27■■■■■ 4.04
ACADVL-210ENST00000578269 CFTRP13569 1480 aa40.12■■■■■ 4.01
ACADVL-210ENST00000578269 SUPT5HO00267 1087 aaKnown RBP40.02■■■■■ 4
ACADVL-210ENST00000578269 CCDC88BA6NC98 1476 aa40■■■■□ 3.99
ACADVL-210ENST00000578269 MRC2Q9UBG0 1479 aa40■■■■□ 3.99
ACADVL-210ENST00000578269 FANCD2Q9BXW9 1451 aa39.98■■■■□ 3.99
ACADVL-210ENST00000578269 CEP164Q9UPV0 1460 aa39.98■■■■□ 3.99
ACADVL-210ENST00000578269 PRDM2Q13029 1718 aa39.9■■■■□ 3.98
ACADVL-210ENST00000578269 WDR62O43379 1518 aa39.89■■■■□ 3.98
ACADVL-210ENST00000578269 URB2Q14146 1524 aaKnown RBP39.59■■■■□ 3.93
ACADVL-210ENST00000578269 DNAJC5Q9H3Z4 198 aa39.52■■■■□ 3.92
ACADVL-210ENST00000578269 TOPBP1Q92547 1522 aa39.3■■■■□ 3.88
ACADVL-210ENST00000578269 ABCC8Q09428 1581 aa39.3■■■■□ 3.88
ACADVL-210ENST00000578269 DNMBPQ6XZF7 1577 aa39.26■■■■□ 3.88
ACADVL-210ENST00000578269 IFT140Q96RY7 1462 aa39.16■■■■□ 3.86
ACADVL-210ENST00000578269 ZNF608Q9ULD9 1512 aaPredicted RBP38.96■■■■□ 3.83
ACADVL-210ENST00000578269 POLA1P09884 1462 aaPredicted RBP38.95■■■■□ 3.83
ACADVL-210ENST00000578269 TARBP1Q13395 1621 aaKnown RBP38.91■■■■□ 3.82
ACADVL-210ENST00000578269 CUX1P39880 1505 aa38.88■■■■□ 3.81
ACADVL-210ENST00000578269 EIF4G3O43432 1585 aaKnown RBP38.87■■■■□ 3.81
ACADVL-210ENST00000578269 FGD5Q6ZNL6 1462 aa38.8■■■■□ 3.8
ACADVL-210ENST00000578269 RAD54L2Q9Y4B4 1467 aa38.75■■■■□ 3.79
ACADVL-210ENST00000578269 SOGA1O94964 1423 aa38.74■■■■□ 3.79
ACADVL-210ENST00000578269 AQRO60306 1485 aaKnown RBP eCLIP38.69■■■■□ 3.781e-9■■■■□ 25.4
ACADVL-210ENST00000578269 WDR97A6NE52 1622 aa38.65■■■■□ 3.78
ACADVL-210ENST00000578269 OSCARQ8IYS5 282 aa38.65■■■■□ 3.78
ACADVL-210ENST00000578269 TDRD9Q8NDG6 1382 aaKnown RBP38.56■■■■□ 3.76
ACADVL-210ENST00000578269 WRNQ14191 1432 aaPredicted RBP eCLIP38.5■■■■□ 3.75
ACADVL-210ENST00000578269 BIVM-ERCC5R4GMW8 1640 aa38.49■■■■□ 3.75
ACADVL-210ENST00000578269 TOP2BQ02880 1626 aa38.48■■■■□ 3.75
ACADVL-210ENST00000578269 CHD1O14646 1710 aa38.44■■■■□ 3.74
ACADVL-210ENST00000578269 SYNJ1O43426 1573 aa38.44■■■■□ 3.74
ACADVL-210ENST00000578269 ABCA10Q8WWZ4 1543 aa38.43■■■■□ 3.74
ACADVL-210ENST00000578269 GRIN2BQ13224 1484 aa38.37■■■■□ 3.73
ACADVL-210ENST00000578269 SNAPC4Q5SXM2 1469 aa38.37■■■■□ 3.73
ACADVL-210ENST00000578269 MAGI1Q96QZ7 1491 aaPredicted RBP38.33■■■■□ 3.73
ACADVL-210ENST00000578269 PBRM1Q86U86 1689 aa38.33■■■■□ 3.73
ACADVL-210ENST00000578269 ABCA5Q8WWZ7 1642 aa38.32■■■■□ 3.73
ACADVL-210ENST00000578269 GAPVD1Q14C86 1478 aa38.32■■■■□ 3.72
ACADVL-210ENST00000578269 FBLN2P98095 1184 aa38.28■■■■□ 3.72
ACADVL-210ENST00000578269 SYNJ2O15056 1496 aa38.17■■■■□ 3.7
ACADVL-210ENST00000578269 RIMBP3CA6NJZ7 1639 aa38.14■■■■□ 3.7
ACADVL-210ENST00000578269 RIMBP3BA6NNM3 1639 aa38.14■■■■□ 3.7
ACADVL-210ENST00000578269 RIMBP3Q9UFD9 1639 aa38.14■■■■□ 3.7
ACADVL-210ENST00000578269 CHMP7Q8WUX9 453 aaPredicted RBP38.13■■■■□ 3.69
ACADVL-210ENST00000578269 ARHGEF11O15085 1522 aa38.09■■■■□ 3.69
ACADVL-210ENST00000578269 TRIM41Q8WV44 630 aa38.09■■■■□ 3.69
ACADVL-210ENST00000578269 CLASP1Q7Z460 1538 aa38■■■■□ 3.67
ACADVL-210ENST00000578269 ADAMTS12P58397 1594 aa37.99■■■■□ 3.67
ACADVL-210ENST00000578269 ERICH3Q5RHP9 1530 aa37.97■■■■□ 3.67
ACADVL-210ENST00000578269 GRIN2AQ12879 1464 aa37.89■■■■□ 3.66
ACADVL-210ENST00000578269 FHAD1B1AJZ9 1412 aa37.87■■■■□ 3.65
ACADVL-210ENST00000578269 ARAP1Q96P48 1450 aa37.75■■■■□ 3.63
ACADVL-210ENST00000578269 KIF27Q86VH2 1401 aa37.73■■■■□ 3.63
ACADVL-210ENST00000578269 NUP160Q12769 1436 aa37.72■■■■□ 3.63
ACADVL-210ENST00000578269 CEP170Q5SW79 1584 aa37.72■■■■□ 3.63
ACADVL-210ENST00000578269 CYB5RLQ6IPT4 315 aa37.67■■■■□ 3.62
ACADVL-210ENST00000578269 CUL7Q14999 1698 aa37.6■■■■□ 3.61
ACADVL-210ENST00000578269 IGF1RP08069 1367 aa37.55■■■■□ 3.6
ACADVL-210ENST00000578269 SHROOM2Q13796 1616 aa37.5■■■■□ 3.59
ACADVL-210ENST00000578269 RUSC2Q8N2Y8 1516 aa37.44■■■■□ 3.58
ACADVL-210ENST00000578269 ERCC6L2Q5T890 1561 aa37.41■■■■□ 3.58
ACADVL-210ENST00000578269 CHIC1Q5VXU3 224 aa37.4■■■■□ 3.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms