RNA–Protein interactions for RNA: ENST00000577256.5

ATG13-223, Transcript of autophagy related 13, humanhuman

TSL 4

Gene ATG13, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-223ENST00000577256 NISCHQ9Y2I1 1504 aa43■■■■■ 4.47
ATG13-223ENST00000577256 CCDC180Q9P1Z9 1646 aa38.3■■■■□ 3.72
ATG13-223ENST00000577256 ABCC9O60706 1549 aa37.52■■■■□ 3.6
ATG13-223ENST00000577256 RB1CC1Q8TDY2 1594 aa36.1■■■■□ 3.37
ATG13-223ENST00000577256 NACADO15069 1562 aa36.04■■■■□ 3.36
ATG13-223ENST00000577256 DCAF8L2P0C7V8 631 aa35.93■■■■□ 3.34
ATG13-223ENST00000577256 MYO15BQ96JP2 1530 aa35.8■■■■□ 3.32
ATG13-223ENST00000577256 ZCCHC6Q5VYS8 1495 aaKnown RBP35.8■■■■□ 3.32
ATG13-223ENST00000577256 DCAF1Q9Y4B6 1507 aa35.6■■■■□ 3.29
ATG13-223ENST00000577256 UNC13AQ9UPW8 1703 aa35.26■■■■□ 3.23
ATG13-223ENST00000577256 PABPN1Q86U42 306 aaKnown RBP eCLIP35.03■■■■□ 3.2
ATG13-223ENST00000577256 BICRAQ9NZM4 1560 aa34.98■■■■□ 3.19
ATG13-223ENST00000577256 SCRIBQ14160 1630 aa34.9■■■■□ 3.18
ATG13-223ENST00000577256 SHROOM4Q9ULL8 1493 aa34.67■■■■□ 3.14
ATG13-223ENST00000577256 DNAJC5BQ9UF47 199 aa34.5■■■■□ 3.11
ATG13-223ENST00000577256 EIF4G1Q04637 1599 aaKnown RBP34.08■■■■□ 3.05
ATG13-223ENST00000577256 CC2D2AQ9P2K1 1620 aa33.96■■■■□ 3.03
ATG13-223ENST00000577256 CECR2Q9BXF3 1484 aa33.76■■■□□ 2.99
ATG13-223ENST00000577256 SMARCA4P51532 1647 aa33.39■■■□□ 2.94
ATG13-223ENST00000577256 BAZ1AQ9NRL2 1556 aaPredicted RBP33.35■■■□□ 2.93
ATG13-223ENST00000577256 NCAPD3P42695 1498 aa33.24■■■□□ 2.91
ATG13-223ENST00000577256 ATAD2BQ9ULI0 1458 aa33.23■■■□□ 2.91
ATG13-223ENST00000577256 SMARCA2P51531 1590 aa33.22■■■□□ 2.91
ATG13-223ENST00000577256 MROH2BQ7Z745 1585 aa33.11■■■□□ 2.89
ATG13-223ENST00000577256 HMGXB3Q12766 1538 aa33.08■■■□□ 2.89
ATG13-223ENST00000577256 PEG3Q9GZU2 1588 aa33.08■■■□□ 2.89
ATG13-223ENST00000577256 BAZ1BQ9UIG0 1483 aaKnown RBP32.96■■■□□ 2.87
ATG13-223ENST00000577256 WIZO95785 1651 aa32.75■■■□□ 2.83
ATG13-223ENST00000577256 RSF1Q96T23 1441 aaPredicted RBP32.7■■■□□ 2.83
ATG13-223ENST00000577256 NESP48681 1621 aa32.43■■■□□ 2.78
ATG13-223ENST00000577256 TOP2AP11388 1531 aaKnown RBP32.42■■■□□ 2.78
ATG13-223ENST00000577256 LAMC3Q9Y6N6 1575 aa32.4■■■□□ 2.78
ATG13-223ENST00000577256 ERCC6Q03468 1493 aa32.39■■■□□ 2.78
ATG13-223ENST00000577256 CADPSQ9ULU8 1353 aa32.26■■■□□ 2.75
ATG13-223ENST00000577256 PDS5BQ9NTI5 1447 aa32.18■■■□□ 2.74
ATG13-223ENST00000577256 CUX2O14529 1486 aa32.1■■■□□ 2.73
ATG13-223ENST00000577256 KIF21AQ7Z4S6 1674 aa32.08■■■□□ 2.73
ATG13-223ENST00000577256 CFTRP13569 1480 aa32.04■■■□□ 2.72
ATG13-223ENST00000577256 CCDC88BA6NC98 1476 aa32.02■■■□□ 2.72
ATG13-223ENST00000577256 THOC2Q8NI27 1593 aaKnown RBP32■■■□□ 2.71
ATG13-223ENST00000577256 FANCD2Q9BXW9 1451 aa31.89■■■□□ 2.7
ATG13-223ENST00000577256 CEP164Q9UPV0 1460 aa31.87■■■□□ 2.69
ATG13-223ENST00000577256 MRC2Q9UBG0 1479 aa31.84■■■□□ 2.69
ATG13-223ENST00000577256 PRDM2Q13029 1718 aa31.83■■■□□ 2.69
ATG13-223ENST00000577256 SUPT5HO00267 1087 aaKnown RBP31.77■■■□□ 2.68
ATG13-223ENST00000577256 WDR62O43379 1518 aa31.75■■■□□ 2.67
ATG13-223ENST00000577256 URB2Q14146 1524 aaKnown RBP31.56■■■□□ 2.64
ATG13-223ENST00000577256 ABCC8Q09428 1581 aa31.39■■■□□ 2.62
ATG13-223ENST00000577256 TOPBP1Q92547 1522 aa31.37■■■□□ 2.61
ATG13-223ENST00000577256 DNMBPQ6XZF7 1577 aa31.34■■■□□ 2.61
ATG13-223ENST00000577256 IFT140Q96RY7 1462 aa31.21■■■□□ 2.59
ATG13-223ENST00000577256 DNAJC5Q9H3Z4 198 aa31.21■■■□□ 2.59
ATG13-223ENST00000577256 CUX1P39880 1505 aa31.08■■■□□ 2.57
ATG13-223ENST00000577256 POLA1P09884 1462 aaPredicted RBP31.08■■■□□ 2.57
ATG13-223ENST00000577256 ZNF608Q9ULD9 1512 aaPredicted RBP31.03■■■□□ 2.56
ATG13-223ENST00000577256 TARBP1Q13395 1621 aaKnown RBP31.03■■■□□ 2.56
ATG13-223ENST00000577256 FGD5Q6ZNL6 1462 aa31■■■□□ 2.55
ATG13-223ENST00000577256 SOGA1O94964 1423 aa30.96■■■□□ 2.55
ATG13-223ENST00000577256 EIF4G3O43432 1585 aaKnown RBP30.94■■■□□ 2.54
ATG13-223ENST00000577256 RAD54L2Q9Y4B4 1467 aa30.94■■■□□ 2.54
ATG13-223ENST00000577256 AQRO60306 1485 aaKnown RBP eCLIP30.85■■■□□ 2.53
ATG13-223ENST00000577256 WRNQ14191 1432 aaPredicted RBP eCLIP30.85■■■□□ 2.53
ATG13-223ENST00000577256 WDR97A6NE52 1622 aa30.83■■■□□ 2.53
ATG13-223ENST00000577256 TOP2BQ02880 1626 aa30.8■■■□□ 2.52
ATG13-223ENST00000577256 BIVM-ERCC5R4GMW8 1640 aa30.8■■■□□ 2.52
ATG13-223ENST00000577256 TDRD9Q8NDG6 1382 aaKnown RBP30.78■■■□□ 2.52
ATG13-223ENST00000577256 SYNJ1O43426 1573 aa30.76■■■□□ 2.52
ATG13-223ENST00000577256 OSCARQ8IYS5 282 aa30.73■■■□□ 2.51
ATG13-223ENST00000577256 ABCA10Q8WWZ4 1543 aa30.71■■■□□ 2.51
ATG13-223ENST00000577256 GRIN2BQ13224 1484 aa30.63■■■□□ 2.49
ATG13-223ENST00000577256 GAPVD1Q14C86 1478 aa30.62■■■□□ 2.49
ATG13-223ENST00000577256 ABCA5Q8WWZ7 1642 aa30.59■■■□□ 2.49
ATG13-223ENST00000577256 SNAPC4Q5SXM2 1469 aa30.58■■■□□ 2.49
ATG13-223ENST00000577256 MAGI1Q96QZ7 1491 aaPredicted RBP30.57■■■□□ 2.48
ATG13-223ENST00000577256 CHD1O14646 1710 aa30.57■■■□□ 2.48
ATG13-223ENST00000577256 PBRM1Q86U86 1689 aa30.55■■■□□ 2.48
ATG13-223ENST00000577256 FBLN2P98095 1184 aa30.51■■■□□ 2.47
ATG13-223ENST00000577256 SYNJ2O15056 1496 aa30.44■■■□□ 2.46
ATG13-223ENST00000577256 CHMP7Q8WUX9 453 aaPredicted RBP30.43■■■□□ 2.46
ATG13-223ENST00000577256 ERICH3Q5RHP9 1530 aa30.35■■■□□ 2.45
ATG13-223ENST00000577256 ADAMTS12P58397 1594 aa30.31■■■□□ 2.44
ATG13-223ENST00000577256 FHAD1B1AJZ9 1412 aa30.26■■■□□ 2.43
ATG13-223ENST00000577256 RIMBP3CA6NJZ7 1639 aa30.25■■■□□ 2.43
ATG13-223ENST00000577256 RIMBP3BA6NNM3 1639 aa30.25■■■□□ 2.43
ATG13-223ENST00000577256 RIMBP3Q9UFD9 1639 aa30.25■■■□□ 2.43
ATG13-223ENST00000577256 CLASP1Q7Z460 1538 aa30.24■■■□□ 2.43
ATG13-223ENST00000577256 KIF27Q86VH2 1401 aa30.23■■■□□ 2.43
ATG13-223ENST00000577256 ARHGEF11O15085 1522 aa30.23■■■□□ 2.43
ATG13-223ENST00000577256 GRIN2AQ12879 1464 aa30.23■■■□□ 2.43
ATG13-223ENST00000577256 TRIM41Q8WV44 630 aa30.12■■■□□ 2.41
ATG13-223ENST00000577256 NUP160Q12769 1436 aa30.1■■■□□ 2.41
ATG13-223ENST00000577256 IGF1RP08069 1367 aa30.09■■■□□ 2.41
ATG13-223ENST00000577256 CEP170Q5SW79 1584 aa30.07■■■□□ 2.4
ATG13-223ENST00000577256 CUL7Q14999 1698 aa30.06■■■□□ 2.4
ATG13-223ENST00000577256 ARAP1Q96P48 1450 aa29.97■■■□□ 2.39
ATG13-223ENST00000577256 CYB5RLQ6IPT4 315 aa29.94■■■□□ 2.38
ATG13-223ENST00000577256 CARMIL1Q5VZK9 1371 aa29.93■■■□□ 2.38
ATG13-223ENST00000577256 SHROOM2Q13796 1616 aa29.89■■■□□ 2.37
ATG13-223ENST00000577256 RUSC2Q8N2Y8 1516 aa29.86■■■□□ 2.37
ATG13-223ENST00000577256 KIAA0586Q9BVV6 1533 aa29.79■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms