RNA–Protein interactions for RNA: ENST00000577105.1

EDC4-214, Transcript of enhancer of mRNA decapping 4, humanhuman

TSL 3

Gene EDC4, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-214ENST00000577105 NISCHQ9Y2I1 1504 aa39.33■■■■□ 3.89
EDC4-214ENST00000577105 CCDC180Q9P1Z9 1646 aa35.32■■■■□ 3.25
EDC4-214ENST00000577105 ABCC9O60706 1549 aa34.76■■■■□ 3.15
EDC4-214ENST00000577105 RB1CC1Q8TDY2 1594 aa33.38■■■□□ 2.93
EDC4-214ENST00000577105 NACADO15069 1562 aa33.25■■■□□ 2.91
EDC4-214ENST00000577105 MYO15BQ96JP2 1530 aa32.95■■■□□ 2.87
EDC4-214ENST00000577105 DCAF8L2P0C7V8 631 aa32.82■■■□□ 2.84
EDC4-214ENST00000577105 UNC13AQ9UPW8 1703 aa32.68■■■□□ 2.82
EDC4-214ENST00000577105 ZCCHC6Q5VYS8 1495 aaKnown RBP32.67■■■□□ 2.82
EDC4-214ENST00000577105 DCAF1Q9Y4B6 1507 aa32.61■■■□□ 2.81
EDC4-214ENST00000577105 BICRAQ9NZM4 1560 aa32.35■■■□□ 2.77
EDC4-214ENST00000577105 PABPN1Q86U42 306 aaKnown RBP eCLIP32.3■■■□□ 2.769e-10■■□□□ 14.1
EDC4-214ENST00000577105 DNAJC5BQ9UF47 199 aa32.24■■■□□ 2.75
EDC4-214ENST00000577105 SHROOM4Q9ULL8 1493 aa32.1■■■□□ 2.73
EDC4-214ENST00000577105 SCRIBQ14160 1630 aa32.01■■■□□ 2.72
EDC4-214ENST00000577105 EIF4G1Q04637 1599 aaKnown RBP31.53■■■□□ 2.64
EDC4-214ENST00000577105 CC2D2AQ9P2K1 1620 aa31.52■■■□□ 2.64
EDC4-214ENST00000577105 CECR2Q9BXF3 1484 aa31.33■■■□□ 2.61
EDC4-214ENST00000577105 SMARCA4P51532 1647 aa30.65■■■□□ 2.5
EDC4-214ENST00000577105 NCAPD3P42695 1498 aa30.63■■■□□ 2.49
EDC4-214ENST00000577105 SMARCA2P51531 1590 aa30.56■■■□□ 2.48
EDC4-214ENST00000577105 BAZ1AQ9NRL2 1556 aaPredicted RBP30.55■■■□□ 2.48
EDC4-214ENST00000577105 ATAD2BQ9ULI0 1458 aa30.54■■■□□ 2.48
EDC4-214ENST00000577105 HMGXB3Q12766 1538 aa30.5■■■□□ 2.47
EDC4-214ENST00000577105 PEG3Q9GZU2 1588 aa30.41■■■□□ 2.46
EDC4-214ENST00000577105 BAZ1BQ9UIG0 1483 aaKnown RBP30.27■■■□□ 2.44
EDC4-214ENST00000577105 MROH2BQ7Z745 1585 aa30.25■■■□□ 2.43
EDC4-214ENST00000577105 ERCC6Q03468 1493 aa30.03■■■□□ 2.4
EDC4-214ENST00000577105 CUX2O14529 1486 aa29.97■■■□□ 2.39
EDC4-214ENST00000577105 LAMC3Q9Y6N6 1575 aa29.95■■■□□ 2.39
EDC4-214ENST00000577105 NESP48681 1621 aa29.94■■■□□ 2.38
EDC4-214ENST00000577105 WIZO95785 1651 aa29.94■■■□□ 2.38
EDC4-214ENST00000577105 RSF1Q96T23 1441 aaPredicted RBP29.72■■■□□ 2.35
EDC4-214ENST00000577105 THOC2Q8NI27 1593 aaKnown RBP29.72■■■□□ 2.35
EDC4-214ENST00000577105 KIF21AQ7Z4S6 1674 aa29.7■■■□□ 2.35
EDC4-214ENST00000577105 PDS5BQ9NTI5 1447 aa29.7■■■□□ 2.34
EDC4-214ENST00000577105 CADPSQ9ULU8 1353 aa29.66■■■□□ 2.34
EDC4-214ENST00000577105 TOP2AP11388 1531 aaKnown RBP29.62■■■□□ 2.33
EDC4-214ENST00000577105 DNAJC5Q9H3Z4 198 aa29.48■■■□□ 2.31
EDC4-214ENST00000577105 CFTRP13569 1480 aa29.43■■■□□ 2.3
EDC4-214ENST00000577105 MRC2Q9UBG0 1479 aa29.42■■■□□ 2.3
EDC4-214ENST00000577105 WDR62O43379 1518 aa29.38■■■□□ 2.29
EDC4-214ENST00000577105 CEP164Q9UPV0 1460 aa29.36■■■□□ 2.29
EDC4-214ENST00000577105 PRDM2Q13029 1718 aa29.35■■■□□ 2.29
EDC4-214ENST00000577105 FANCD2Q9BXW9 1451 aa29.33■■■□□ 2.29
EDC4-214ENST00000577105 CCDC88BA6NC98 1476 aa29.21■■■□□ 2.27
EDC4-214ENST00000577105 URB2Q14146 1524 aaKnown RBP29.06■■■□□ 2.24
EDC4-214ENST00000577105 ABCC8Q09428 1581 aa28.88■■■□□ 2.21
EDC4-214ENST00000577105 TOPBP1Q92547 1522 aa28.83■■■□□ 2.21
EDC4-214ENST00000577105 DNMBPQ6XZF7 1577 aa28.8■■■□□ 2.2
EDC4-214ENST00000577105 IFT140Q96RY7 1462 aa28.78■■■□□ 2.2
EDC4-214ENST00000577105 ZNF608Q9ULD9 1512 aaPredicted RBP28.61■■■□□ 2.17
EDC4-214ENST00000577105 TARBP1Q13395 1621 aaKnown RBP28.6■■■□□ 2.17
EDC4-214ENST00000577105 EIF4G3O43432 1585 aaKnown RBP28.58■■■□□ 2.17
EDC4-214ENST00000577105 POLA1P09884 1462 aaPredicted RBP28.54■■■□□ 2.16
EDC4-214ENST00000577105 OSCARQ8IYS5 282 aa28.53■■■□□ 2.16
EDC4-214ENST00000577105 SUPT5HO00267 1087 aaKnown RBP28.48■■■□□ 2.15
EDC4-214ENST00000577105 WDR97A6NE52 1622 aa28.44■■■□□ 2.14
EDC4-214ENST00000577105 CUX1P39880 1505 aa28.43■■■□□ 2.14
EDC4-214ENST00000577105 FGD5Q6ZNL6 1462 aa28.4■■■□□ 2.14
EDC4-214ENST00000577105 SOGA1O94964 1423 aa28.38■■■□□ 2.13
EDC4-214ENST00000577105 AQRO60306 1485 aaKnown RBP eCLIP28.37■■■□□ 2.134e-7■■■■□ 21.7
EDC4-214ENST00000577105 RAD54L2Q9Y4B4 1467 aa28.35■■■□□ 2.13
EDC4-214ENST00000577105 CHD1O14646 1710 aa28.33■■■□□ 2.13
EDC4-214ENST00000577105 TDRD9Q8NDG6 1382 aaKnown RBP28.23■■■□□ 2.11
EDC4-214ENST00000577105 RIMBP3CA6NJZ7 1639 aa28.21■■■□□ 2.11
EDC4-214ENST00000577105 RIMBP3BA6NNM3 1639 aa28.21■■■□□ 2.11
EDC4-214ENST00000577105 RIMBP3Q9UFD9 1639 aa28.21■■■□□ 2.11
EDC4-214ENST00000577105 TRIM41Q8WV44 630 aa28.2■■■□□ 2.1
EDC4-214ENST00000577105 MAGI1Q96QZ7 1491 aaPredicted RBP28.17■■■□□ 2.1
EDC4-214ENST00000577105 BIVM-ERCC5R4GMW8 1640 aa28.16■■■□□ 2.1
EDC4-214ENST00000577105 GRIN2BQ13224 1484 aa28.15■■■□□ 2.1
EDC4-214ENST00000577105 PBRM1Q86U86 1689 aa28.15■■■□□ 2.1
EDC4-214ENST00000577105 SNAPC4Q5SXM2 1469 aa28.15■■■□□ 2.1
EDC4-214ENST00000577105 ABCA10Q8WWZ4 1543 aa28.14■■■□□ 2.1
EDC4-214ENST00000577105 ARHGEF11O15085 1522 aa28.13■■■□□ 2.09
EDC4-214ENST00000577105 TOP2BQ02880 1626 aa28.12■■■□□ 2.09
EDC4-214ENST00000577105 ABCA5Q8WWZ7 1642 aa28.11■■■□□ 2.09
EDC4-214ENST00000577105 GAPVD1Q14C86 1478 aa28.08■■■□□ 2.09
EDC4-214ENST00000577105 FBLN2P98095 1184 aa28.06■■■□□ 2.08
EDC4-214ENST00000577105 WRNQ14191 1432 aaPredicted RBP eCLIP28.06■■■□□ 2.08
EDC4-214ENST00000577105 SYNJ2O15056 1496 aa28.04■■■□□ 2.08
EDC4-214ENST00000577105 SYNJ1O43426 1573 aa28.03■■■□□ 2.08
EDC4-214ENST00000577105 CLASP1Q7Z460 1538 aa27.99■■■□□ 2.07
EDC4-214ENST00000577105 CHMP7Q8WUX9 453 aaPredicted RBP27.97■■■□□ 2.07
EDC4-214ENST00000577105 ADAMTS12P58397 1594 aa27.86■■■□□ 2.05
EDC4-214ENST00000577105 ARAP1Q96P48 1450 aa27.85■■■□□ 2.05
EDC4-214ENST00000577105 ERICH3Q5RHP9 1530 aa27.83■■■□□ 2.05
EDC4-214ENST00000577105 GRIN2AQ12879 1464 aa27.79■■■□□ 2.04
EDC4-214ENST00000577105 CYB5RLQ6IPT4 315 aa27.77■■■□□ 2.04
EDC4-214ENST00000577105 FHAD1B1AJZ9 1412 aa27.75■■■□□ 2.03
EDC4-214ENST00000577105 NUP160Q12769 1436 aa27.69■■■□□ 2.02
EDC4-214ENST00000577105 CEP170Q5SW79 1584 aa27.67■■■□□ 2.02
EDC4-214ENST00000577105 SHROOM2Q13796 1616 aa27.61■■■□□ 2.01
EDC4-214ENST00000577105 CUL7Q14999 1698 aa27.53■■■□□ 2
EDC4-214ENST00000577105 KIF27Q86VH2 1401 aa27.52■■■□□ 2
EDC4-214ENST00000577105 ERCC6L2Q5T890 1561 aa27.48■■□□□ 1.99
EDC4-214ENST00000577105 RUSC2Q8N2Y8 1516 aa27.46■■□□□ 1.99
EDC4-214ENST00000577105 IGF1RP08069 1367 aa27.42■■□□□ 1.98
EDC4-214ENST00000577105 TRHP20396 242 aaPredicted RBP27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms