RNA–Protein interactions for RNA: ENST00000576788.1

TRAP1-217, Transcript of TNF receptor associated protein 1, humanhuman

TSL 4

Gene TRAP1, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-217ENST00000576788 NISCHQ9Y2I1 1504 aa23.92■■□□□ 1.42
TRAP1-217ENST00000576788 CCDC180Q9P1Z9 1646 aa21.4■■□□□ 1.02
TRAP1-217ENST00000576788 ABCC9O60706 1549 aa21.2■□□□□ 0.98
TRAP1-217ENST00000576788 RB1CC1Q8TDY2 1594 aa20.28■□□□□ 0.84
TRAP1-217ENST00000576788 DCAF8L2P0C7V8 631 aa20.25■□□□□ 0.83
TRAP1-217ENST00000576788 NACADO15069 1562 aa20.16■□□□□ 0.82
TRAP1-217ENST00000576788 ZCCHC6Q5VYS8 1495 aaKnown RBP19.9■□□□□ 0.78
TRAP1-217ENST00000576788 MYO15BQ96JP2 1530 aa19.89■□□□□ 0.77
TRAP1-217ENST00000576788 UNC13AQ9UPW8 1703 aa19.85■□□□□ 0.77
TRAP1-217ENST00000576788 DCAF1Q9Y4B6 1507 aa19.78■□□□□ 0.76
TRAP1-217ENST00000576788 PABPN1Q86U42 306 aaKnown RBP eCLIP19.77■□□□□ 0.76
TRAP1-217ENST00000576788 BICRAQ9NZM4 1560 aa19.6■□□□□ 0.73
TRAP1-217ENST00000576788 SCRIBQ14160 1630 aa19.58■□□□□ 0.72
TRAP1-217ENST00000576788 DNAJC5BQ9UF47 199 aa19.57■□□□□ 0.72
TRAP1-217ENST00000576788 SHROOM4Q9ULL8 1493 aa19.35■□□□□ 0.69
TRAP1-217ENST00000576788 CC2D2AQ9P2K1 1620 aa19.15■□□□□ 0.66
TRAP1-217ENST00000576788 EIF4G1Q04637 1599 aaKnown RBP19.15■□□□□ 0.66
TRAP1-217ENST00000576788 CECR2Q9BXF3 1484 aa19.05■□□□□ 0.64
TRAP1-217ENST00000576788 SMARCA4P51532 1647 aa18.64■□□□□ 0.57
TRAP1-217ENST00000576788 BAZ1AQ9NRL2 1556 aaPredicted RBP18.59■□□□□ 0.57
TRAP1-217ENST00000576788 SMARCA2P51531 1590 aa18.57■□□□□ 0.56
TRAP1-217ENST00000576788 ATAD2BQ9ULI0 1458 aa18.56■□□□□ 0.56
TRAP1-217ENST00000576788 NCAPD3P42695 1498 aa18.55■□□□□ 0.56
TRAP1-217ENST00000576788 HMGXB3Q12766 1538 aa18.48■□□□□ 0.55
TRAP1-217ENST00000576788 BAZ1BQ9UIG0 1483 aaKnown RBP18.46■□□□□ 0.55
TRAP1-217ENST00000576788 MROH2BQ7Z745 1585 aa18.44■□□□□ 0.54
TRAP1-217ENST00000576788 PEG3Q9GZU2 1588 aa18.39■□□□□ 0.53
TRAP1-217ENST00000576788 ERCC6Q03468 1493 aa18.34■□□□□ 0.53
TRAP1-217ENST00000576788 WIZO95785 1651 aa18.28■□□□□ 0.52
TRAP1-217ENST00000576788 NESP48681 1621 aa18.25■□□□□ 0.51
TRAP1-217ENST00000576788 LAMC3Q9Y6N6 1575 aa18.17■□□□□ 0.5
TRAP1-217ENST00000576788 RSF1Q96T23 1441 aaPredicted RBP18.14■□□□□ 0.49
TRAP1-217ENST00000576788 CUX2O14529 1486 aa18.14■□□□□ 0.49
TRAP1-217ENST00000576788 KIF21AQ7Z4S6 1674 aa18.09■□□□□ 0.49
TRAP1-217ENST00000576788 PDS5BQ9NTI5 1447 aa18.06■□□□□ 0.48
TRAP1-217ENST00000576788 CADPSQ9ULU8 1353 aa18.04■□□□□ 0.48
TRAP1-217ENST00000576788 TOP2AP11388 1531 aaKnown RBP18.03■□□□□ 0.48
TRAP1-217ENST00000576788 THOC2Q8NI27 1593 aaKnown RBP18.01■□□□□ 0.47
TRAP1-217ENST00000576788 CEP164Q9UPV0 1460 aa17.89■□□□□ 0.45
TRAP1-217ENST00000576788 MRC2Q9UBG0 1479 aa17.88■□□□□ 0.45
TRAP1-217ENST00000576788 FANCD2Q9BXW9 1451 aa17.87■□□□□ 0.45
TRAP1-217ENST00000576788 CFTRP13569 1480 aa17.86■□□□□ 0.45
TRAP1-217ENST00000576788 PRDM2Q13029 1718 aa17.84■□□□□ 0.45
TRAP1-217ENST00000576788 DNAJC5Q9H3Z4 198 aa17.83■□□□□ 0.44
TRAP1-217ENST00000576788 CCDC88BA6NC98 1476 aa17.82■□□□□ 0.44
TRAP1-217ENST00000576788 WDR62O43379 1518 aa17.81■□□□□ 0.44
TRAP1-217ENST00000576788 URB2Q14146 1524 aaKnown RBP17.67■□□□□ 0.42
TRAP1-217ENST00000576788 SUPT5HO00267 1087 aaKnown RBP17.64■□□□□ 0.41
TRAP1-217ENST00000576788 TOPBP1Q92547 1522 aa17.55■□□□□ 0.4
TRAP1-217ENST00000576788 ABCC8Q09428 1581 aa17.53■□□□□ 0.4
TRAP1-217ENST00000576788 DNMBPQ6XZF7 1577 aa17.52■□□□□ 0.39
TRAP1-217ENST00000576788 IFT140Q96RY7 1462 aa17.5■□□□□ 0.39
TRAP1-217ENST00000576788 ZNF608Q9ULD9 1512 aaPredicted RBP17.43■□□□□ 0.38
TRAP1-217ENST00000576788 EIF4G3O43432 1585 aaKnown RBP17.39■□□□□ 0.37
TRAP1-217ENST00000576788 OSCARQ8IYS5 282 aa17.38■□□□□ 0.37
TRAP1-217ENST00000576788 POLA1P09884 1462 aaPredicted RBP17.37■□□□□ 0.37
TRAP1-217ENST00000576788 TARBP1Q13395 1621 aaKnown RBP17.36■□□□□ 0.37
TRAP1-217ENST00000576788 CUX1P39880 1505 aa17.32■□□□□ 0.36
TRAP1-217ENST00000576788 FGD5Q6ZNL6 1462 aa17.32■□□□□ 0.36
TRAP1-217ENST00000576788 RAD54L2Q9Y4B4 1467 aa17.32■□□□□ 0.36
TRAP1-217ENST00000576788 SOGA1O94964 1423 aa17.32■□□□□ 0.36
TRAP1-217ENST00000576788 AQRO60306 1485 aaKnown RBP eCLIP17.31■□□□□ 0.36
TRAP1-217ENST00000576788 TRIM41Q8WV44 630 aa17.29■□□□□ 0.36
TRAP1-217ENST00000576788 CHD1O14646 1710 aa17.27■□□□□ 0.35
TRAP1-217ENST00000576788 FBLN2P98095 1184 aa17.26■□□□□ 0.35
TRAP1-217ENST00000576788 TDRD9Q8NDG6 1382 aaKnown RBP17.26■□□□□ 0.35
TRAP1-217ENST00000576788 WDR97A6NE52 1622 aa17.21■□□□□ 0.35
TRAP1-217ENST00000576788 SNAPC4Q5SXM2 1469 aa17.17■□□□□ 0.34
TRAP1-217ENST00000576788 PBRM1Q86U86 1689 aa17.16■□□□□ 0.34
TRAP1-217ENST00000576788 RIMBP3CA6NJZ7 1639 aa17.14■□□□□ 0.33
TRAP1-217ENST00000576788 RIMBP3BA6NNM3 1639 aa17.14■□□□□ 0.33
TRAP1-217ENST00000576788 RIMBP3Q9UFD9 1639 aa17.14■□□□□ 0.33
TRAP1-217ENST00000576788 WRNQ14191 1432 aaPredicted RBP eCLIP17.14■□□□□ 0.33
TRAP1-217ENST00000576788 GRIN2BQ13224 1484 aa17.14■□□□□ 0.33
TRAP1-217ENST00000576788 BIVM-ERCC5R4GMW8 1640 aa17.14■□□□□ 0.33
TRAP1-217ENST00000576788 CHMP7Q8WUX9 453 aaPredicted RBP17.13■□□□□ 0.33
TRAP1-217ENST00000576788 GAPVD1Q14C86 1478 aa17.12■□□□□ 0.33
TRAP1-217ENST00000576788 TOP2BQ02880 1626 aa17.12■□□□□ 0.33
TRAP1-217ENST00000576788 MAGI1Q96QZ7 1491 aaPredicted RBP17.12■□□□□ 0.33
TRAP1-217ENST00000576788 SYNJ1O43426 1573 aa17.11■□□□□ 0.33
TRAP1-217ENST00000576788 ABCA10Q8WWZ4 1543 aa17.11■□□□□ 0.33
TRAP1-217ENST00000576788 ARHGEF11O15085 1522 aa17.08■□□□□ 0.32
TRAP1-217ENST00000576788 ABCA5Q8WWZ7 1642 aa17.07■□□□□ 0.32
TRAP1-217ENST00000576788 SYNJ2O15056 1496 aa17.05■□□□□ 0.32
TRAP1-217ENST00000576788 CYB5RLQ6IPT4 315 aa16.98■□□□□ 0.31
TRAP1-217ENST00000576788 CLASP1Q7Z460 1538 aa16.96■□□□□ 0.31
TRAP1-217ENST00000576788 ADAMTS12P58397 1594 aa16.95■□□□□ 0.3
TRAP1-217ENST00000576788 ARAP1Q96P48 1450 aa16.92■□□□□ 0.3
TRAP1-217ENST00000576788 ERICH3Q5RHP9 1530 aa16.91■□□□□ 0.3
TRAP1-217ENST00000576788 GRIN2AQ12879 1464 aa16.91■□□□□ 0.3
TRAP1-217ENST00000576788 FHAD1B1AJZ9 1412 aa16.89■□□□□ 0.29
TRAP1-217ENST00000576788 CEP170Q5SW79 1584 aa16.85■□□□□ 0.29
TRAP1-217ENST00000576788 KIF27Q86VH2 1401 aa16.81■□□□□ 0.28
TRAP1-217ENST00000576788 NUP160Q12769 1436 aa16.8■□□□□ 0.28
TRAP1-217ENST00000576788 TRHP20396 242 aaPredicted RBP16.79■□□□□ 0.28
TRAP1-217ENST00000576788 CUL7Q14999 1698 aa16.77■□□□□ 0.28
TRAP1-217ENST00000576788 ERCC6L2Q5T890 1561 aa16.74■□□□□ 0.27
TRAP1-217ENST00000576788 SHROOM2Q13796 1616 aa16.73■□□□□ 0.27
TRAP1-217ENST00000576788 IGF1RP08069 1367 aa16.71■□□□□ 0.27
TRAP1-217ENST00000576788 RUSC2Q8N2Y8 1516 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 183.3 ms