RNA–Protein interactions for RNA: ENST00000576505.6

CIC-209, Transcript of capicua transcriptional repressor, humanhuman

TSL 3

Gene CIC, Length 1,304 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIC-209ENST00000576505 NISCHQ9Y2I1 1504 aa44.22■■■■■ 4.67
CIC-209ENST00000576505 CCDC180Q9P1Z9 1646 aa39.55■■■■□ 3.92
CIC-209ENST00000576505 ABCC9O60706 1549 aa39.3■■■■□ 3.88
CIC-209ENST00000576505 RB1CC1Q8TDY2 1594 aa37.52■■■■□ 3.6
CIC-209ENST00000576505 NACADO15069 1562 aa37.33■■■■□ 3.57
CIC-209ENST00000576505 DCAF8L2P0C7V8 631 aa37.26■■■■□ 3.56
CIC-209ENST00000576505 MYO15BQ96JP2 1530 aa36.89■■■■□ 3.5
CIC-209ENST00000576505 ZCCHC6Q5VYS8 1495 aaKnown RBP36.71■■■■□ 3.47
CIC-209ENST00000576505 UNC13AQ9UPW8 1703 aa36.66■■■■□ 3.46
CIC-209ENST00000576505 PABPN1Q86U42 306 aaKnown RBP eCLIP36.64■■■■□ 3.46
CIC-209ENST00000576505 DNAJC5BQ9UF47 199 aa36.59■■■■□ 3.45
CIC-209ENST00000576505 DCAF1Q9Y4B6 1507 aa36.53■■■■□ 3.44
CIC-209ENST00000576505 BICRAQ9NZM4 1560 aa36.4■■■■□ 3.42
CIC-209ENST00000576505 SCRIBQ14160 1630 aa36.1■■■■□ 3.37
CIC-209ENST00000576505 SHROOM4Q9ULL8 1493 aa35.93■■■■□ 3.34
CIC-209ENST00000576505 CC2D2AQ9P2K1 1620 aa35.5■■■■□ 3.27
CIC-209ENST00000576505 EIF4G1Q04637 1599 aaKnown RBP35.5■■■■□ 3.27
CIC-209ENST00000576505 CECR2Q9BXF3 1484 aa35.37■■■■□ 3.25
CIC-209ENST00000576505 NCAPD3P42695 1498 aa34.44■■■■□ 3.1
CIC-209ENST00000576505 SMARCA4P51532 1647 aa34.44■■■■□ 3.1
CIC-209ENST00000576505 ATAD2BQ9ULI0 1458 aa34.39■■■■□ 3.1
CIC-209ENST00000576505 SMARCA2P51531 1590 aa34.32■■■■□ 3.08
CIC-209ENST00000576505 BAZ1AQ9NRL2 1556 aaPredicted RBP34.31■■■■□ 3.08
CIC-209ENST00000576505 HMGXB3Q12766 1538 aa34.22■■■■□ 3.07
CIC-209ENST00000576505 BAZ1BQ9UIG0 1483 aaKnown RBP34.1■■■■□ 3.05
CIC-209ENST00000576505 MROH2BQ7Z745 1585 aa34.08■■■■□ 3.05
CIC-209ENST00000576505 PEG3Q9GZU2 1588 aa34.08■■■■□ 3.05
CIC-209ENST00000576505 ERCC6Q03468 1493 aa33.93■■■■□ 3.02
CIC-209ENST00000576505 NESP48681 1621 aa33.83■■■■□ 3.01
CIC-209ENST00000576505 CUX2O14529 1486 aa33.73■■■□□ 2.99
CIC-209ENST00000576505 WIZO95785 1651 aa33.69■■■□□ 2.98
CIC-209ENST00000576505 LAMC3Q9Y6N6 1575 aa33.64■■■□□ 2.98
CIC-209ENST00000576505 RSF1Q96T23 1441 aaPredicted RBP33.48■■■□□ 2.95
CIC-209ENST00000576505 PDS5BQ9NTI5 1447 aa33.44■■■□□ 2.94
CIC-209ENST00000576505 THOC2Q8NI27 1593 aaKnown RBP33.43■■■□□ 2.94
CIC-209ENST00000576505 CADPSQ9ULU8 1353 aa33.42■■■□□ 2.94
CIC-209ENST00000576505 KIF21AQ7Z4S6 1674 aa33.41■■■□□ 2.94
CIC-209ENST00000576505 DNAJC5Q9H3Z4 198 aa33.38■■■□□ 2.93
CIC-209ENST00000576505 TOP2AP11388 1531 aaKnown RBP33.29■■■□□ 2.92
CIC-209ENST00000576505 MRC2Q9UBG0 1479 aa33.14■■■□□ 2.9
CIC-209ENST00000576505 CFTRP13569 1480 aa33.11■■■□□ 2.89
CIC-209ENST00000576505 CEP164Q9UPV0 1460 aa33.07■■■□□ 2.88
CIC-209ENST00000576505 FANCD2Q9BXW9 1451 aa33.06■■■□□ 2.88
CIC-209ENST00000576505 WDR62O43379 1518 aa33.03■■■□□ 2.88
CIC-209ENST00000576505 CCDC88BA6NC98 1476 aa32.91■■■□□ 2.86
CIC-209ENST00000576505 PRDM2Q13029 1718 aa32.8■■■□□ 2.84
CIC-209ENST00000576505 URB2Q14146 1524 aaKnown RBP32.77■■■□□ 2.84
CIC-209ENST00000576505 TOPBP1Q92547 1522 aa32.46■■■□□ 2.79
CIC-209ENST00000576505 ABCC8Q09428 1581 aa32.41■■■□□ 2.78
CIC-209ENST00000576505 IFT140Q96RY7 1462 aa32.39■■■□□ 2.78
CIC-209ENST00000576505 DNMBPQ6XZF7 1577 aa32.37■■■□□ 2.77
CIC-209ENST00000576505 ZNF608Q9ULD9 1512 aaPredicted RBP32.31■■■□□ 2.76
CIC-209ENST00000576505 SUPT5HO00267 1087 aaKnown RBP32.26■■■□□ 2.76
CIC-209ENST00000576505 OSCARQ8IYS5 282 aa32.26■■■□□ 2.75
CIC-209ENST00000576505 EIF4G3O43432 1585 aaKnown RBP32.16■■■□□ 2.74
CIC-209ENST00000576505 POLA1P09884 1462 aaPredicted RBP32.15■■■□□ 2.74
CIC-209ENST00000576505 TARBP1Q13395 1621 aaKnown RBP32.15■■■□□ 2.74
CIC-209ENST00000576505 TRIM41Q8WV44 630 aa32.09■■■□□ 2.73
CIC-209ENST00000576505 AQRO60306 1485 aaKnown RBP eCLIP32.07■■■□□ 2.724e-6■■■■■ 31
CIC-209ENST00000576505 RAD54L2Q9Y4B4 1467 aa32.03■■■□□ 2.72
CIC-209ENST00000576505 SOGA1O94964 1423 aa32.01■■■□□ 2.71
CIC-209ENST00000576505 CUX1P39880 1505 aa32■■■□□ 2.71
CIC-209ENST00000576505 FGD5Q6ZNL6 1462 aa31.99■■■□□ 2.71
CIC-209ENST00000576505 TDRD9Q8NDG6 1382 aaKnown RBP31.92■■■□□ 2.7
CIC-209ENST00000576505 CHD1O14646 1710 aa31.86■■■□□ 2.69
CIC-209ENST00000576505 FBLN2P98095 1184 aa31.83■■■□□ 2.69
CIC-209ENST00000576505 WDR97A6NE52 1622 aa31.83■■■□□ 2.69
CIC-209ENST00000576505 RIMBP3CA6NJZ7 1639 aa31.8■■■□□ 2.68
CIC-209ENST00000576505 RIMBP3BA6NNM3 1639 aa31.8■■■□□ 2.68
CIC-209ENST00000576505 RIMBP3Q9UFD9 1639 aa31.8■■■□□ 2.68
CIC-209ENST00000576505 SNAPC4Q5SXM2 1469 aa31.75■■■□□ 2.67
CIC-209ENST00000576505 ARHGEF11O15085 1522 aa31.73■■■□□ 2.67
CIC-209ENST00000576505 GRIN2BQ13224 1484 aa31.71■■■□□ 2.67
CIC-209ENST00000576505 MAGI1Q96QZ7 1491 aaPredicted RBP31.67■■■□□ 2.66
CIC-209ENST00000576505 ABCA10Q8WWZ4 1543 aa31.63■■■□□ 2.65
CIC-209ENST00000576505 GAPVD1Q14C86 1478 aa31.63■■■□□ 2.65
CIC-209ENST00000576505 CHMP7Q8WUX9 453 aaPredicted RBP31.63■■■□□ 2.65
CIC-209ENST00000576505 PBRM1Q86U86 1689 aa31.6■■■□□ 2.65
CIC-209ENST00000576505 WRNQ14191 1432 aaPredicted RBP eCLIP31.59■■■□□ 2.65
CIC-209ENST00000576505 TOP2BQ02880 1626 aa31.57■■■□□ 2.65
CIC-209ENST00000576505 ABCA5Q8WWZ7 1642 aa31.57■■■□□ 2.64
CIC-209ENST00000576505 BIVM-ERCC5R4GMW8 1640 aa31.57■■■□□ 2.64
CIC-209ENST00000576505 SYNJ2O15056 1496 aa31.56■■■□□ 2.64
CIC-209ENST00000576505 SYNJ1O43426 1573 aa31.55■■■□□ 2.64
CIC-209ENST00000576505 CYB5RLQ6IPT4 315 aa31.49■■■□□ 2.63
CIC-209ENST00000576505 CLASP1Q7Z460 1538 aa31.49■■■□□ 2.63
CIC-209ENST00000576505 ARAP1Q96P48 1450 aa31.43■■■□□ 2.62
CIC-209ENST00000576505 ADAMTS12P58397 1594 aa31.31■■■□□ 2.6
CIC-209ENST00000576505 GRIN2AQ12879 1464 aa31.29■■■□□ 2.6
CIC-209ENST00000576505 ERICH3Q5RHP9 1530 aa31.25■■■□□ 2.59
CIC-209ENST00000576505 FHAD1B1AJZ9 1412 aa31.24■■■□□ 2.59
CIC-209ENST00000576505 CEP170Q5SW79 1584 aa31.17■■■□□ 2.58
CIC-209ENST00000576505 NUP160Q12769 1436 aa31.16■■■□□ 2.58
CIC-209ENST00000576505 TRHP20396 242 aaPredicted RBP31.08■■■□□ 2.57
CIC-209ENST00000576505 ERCC6L2Q5T890 1561 aa31.03■■■□□ 2.56
CIC-209ENST00000576505 SHROOM2Q13796 1616 aa30.99■■■□□ 2.55
CIC-209ENST00000576505 KIF27Q86VH2 1401 aa30.98■■■□□ 2.55
CIC-209ENST00000576505 IGF1RP08069 1367 aa30.92■■■□□ 2.54
CIC-209ENST00000576505 RUSC2Q8N2Y8 1516 aa30.87■■■□□ 2.53
CIC-209ENST00000576505 PRG4Q92954 1404 aaPredicted RBP30.87■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms