RNA–Protein interactions for RNA: ENST00000576498.5

HGS-216, Transcript of hepatocyte growth factor-regulated tyrosine kinase substrate, humanhuman

TSL 2

Gene HGS, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HGS-216ENST00000576498 NISCHQ9Y2I1 1504 aa43.99■■■■■ 4.63
HGS-216ENST00000576498 CCDC180Q9P1Z9 1646 aa39.31■■■■□ 3.88
HGS-216ENST00000576498 ABCC9O60706 1549 aa39.25■■■■□ 3.87
HGS-216ENST00000576498 RB1CC1Q8TDY2 1594 aa37.38■■■■□ 3.57
HGS-216ENST00000576498 NACADO15069 1562 aa37.17■■■■□ 3.54
HGS-216ENST00000576498 DNAJC5BQ9UF47 199 aa36.88■■■■□ 3.49
HGS-216ENST00000576498 DCAF8L2P0C7V8 631 aa36.8■■■■□ 3.48
HGS-216ENST00000576498 MYO15BQ96JP2 1530 aa36.78■■■■□ 3.48
HGS-216ENST00000576498 ZCCHC6Q5VYS8 1495 aaKnown RBP36.59■■■■□ 3.45
HGS-216ENST00000576498 PABPN1Q86U42 306 aaKnown RBP eCLIP36.54■■■■□ 3.44
HGS-216ENST00000576498 UNC13AQ9UPW8 1703 aa36.53■■■■□ 3.44
HGS-216ENST00000576498 DCAF1Q9Y4B6 1507 aa36.49■■■■□ 3.43
HGS-216ENST00000576498 BICRAQ9NZM4 1560 aa36.4■■■■□ 3.42
HGS-216ENST00000576498 SHROOM4Q9ULL8 1493 aa35.88■■■■□ 3.33
HGS-216ENST00000576498 SCRIBQ14160 1630 aa35.79■■■■□ 3.32
HGS-216ENST00000576498 CC2D2AQ9P2K1 1620 aa35.48■■■■□ 3.27
HGS-216ENST00000576498 EIF4G1Q04637 1599 aaKnown RBP35.44■■■■□ 3.26
HGS-216ENST00000576498 CECR2Q9BXF3 1484 aa35.37■■■■□ 3.25
HGS-216ENST00000576498 NCAPD3P42695 1498 aa34.37■■■■□ 3.09
HGS-216ENST00000576498 ATAD2BQ9ULI0 1458 aa34.26■■■■□ 3.07
HGS-216ENST00000576498 SMARCA4P51532 1647 aa34.19■■■■□ 3.06
HGS-216ENST00000576498 BAZ1AQ9NRL2 1556 aaPredicted RBP34.16■■■■□ 3.06
HGS-216ENST00000576498 SMARCA2P51531 1590 aa34.1■■■■□ 3.05
HGS-216ENST00000576498 HMGXB3Q12766 1538 aa34.09■■■■□ 3.05
HGS-216ENST00000576498 PEG3Q9GZU2 1588 aa33.94■■■■□ 3.02
HGS-216ENST00000576498 BAZ1BQ9UIG0 1483 aaKnown RBP33.86■■■■□ 3.01
HGS-216ENST00000576498 CUX2O14529 1486 aa33.84■■■■□ 3.01
HGS-216ENST00000576498 ERCC6Q03468 1493 aa33.82■■■■□ 3.01
HGS-216ENST00000576498 MROH2BQ7Z745 1585 aa33.81■■■■□ 3
HGS-216ENST00000576498 DNAJC5Q9H3Z4 198 aa33.78■■■■□ 3
HGS-216ENST00000576498 NESP48681 1621 aa33.78■■■■□ 3
HGS-216ENST00000576498 LAMC3Q9Y6N6 1575 aa33.52■■■□□ 2.96
HGS-216ENST00000576498 THOC2Q8NI27 1593 aaKnown RBP33.44■■■□□ 2.94
HGS-216ENST00000576498 WIZO95785 1651 aa33.43■■■□□ 2.94
HGS-216ENST00000576498 RSF1Q96T23 1441 aaPredicted RBP33.39■■■□□ 2.94
HGS-216ENST00000576498 PDS5BQ9NTI5 1447 aa33.3■■■□□ 2.92
HGS-216ENST00000576498 CADPSQ9ULU8 1353 aa33.29■■■□□ 2.92
HGS-216ENST00000576498 KIF21AQ7Z4S6 1674 aa33.28■■■□□ 2.92
HGS-216ENST00000576498 TOP2AP11388 1531 aaKnown RBP33.16■■■□□ 2.9
HGS-216ENST00000576498 MRC2Q9UBG0 1479 aa33.05■■■□□ 2.88
HGS-216ENST00000576498 WDR62O43379 1518 aa33■■■□□ 2.87
HGS-216ENST00000576498 CFTRP13569 1480 aa32.94■■■□□ 2.86
HGS-216ENST00000576498 CEP164Q9UPV0 1460 aa32.89■■■□□ 2.86
HGS-216ENST00000576498 FANCD2Q9BXW9 1451 aa32.88■■■□□ 2.85
HGS-216ENST00000576498 CCDC88BA6NC98 1476 aa32.73■■■□□ 2.83
HGS-216ENST00000576498 URB2Q14146 1524 aaKnown RBP32.66■■■□□ 2.82
HGS-216ENST00000576498 PRDM2Q13029 1718 aa32.59■■■□□ 2.81
HGS-216ENST00000576498 SUPT5HO00267 1087 aaKnown RBP32.29■■■□□ 2.76
HGS-216ENST00000576498 TOPBP1Q92547 1522 aa32.28■■■□□ 2.76
HGS-216ENST00000576498 ABCC8Q09428 1581 aa32.25■■■□□ 2.75
HGS-216ENST00000576498 IFT140Q96RY7 1462 aa32.25■■■□□ 2.75
HGS-216ENST00000576498 OSCARQ8IYS5 282 aa32.24■■■□□ 2.75
HGS-216ENST00000576498 ZNF608Q9ULD9 1512 aaPredicted RBP32.24■■■□□ 2.75
HGS-216ENST00000576498 TRIM41Q8WV44 630 aa32.19■■■□□ 2.74
HGS-216ENST00000576498 DNMBPQ6XZF7 1577 aa32.15■■■□□ 2.74
HGS-216ENST00000576498 EIF4G3O43432 1585 aaKnown RBP32.02■■■□□ 2.72
HGS-216ENST00000576498 TARBP1Q13395 1621 aaKnown RBP32.01■■■□□ 2.72
HGS-216ENST00000576498 POLA1P09884 1462 aaPredicted RBP31.97■■■□□ 2.71
HGS-216ENST00000576498 AQRO60306 1485 aaKnown RBP eCLIP31.92■■■□□ 2.73e-7■■■■□ 20.6
HGS-216ENST00000576498 RIMBP3CA6NJZ7 1639 aa31.86■■■□□ 2.69
HGS-216ENST00000576498 RIMBP3BA6NNM3 1639 aa31.86■■■□□ 2.69
HGS-216ENST00000576498 RIMBP3Q9UFD9 1639 aa31.86■■■□□ 2.69
HGS-216ENST00000576498 RAD54L2Q9Y4B4 1467 aa31.84■■■□□ 2.69
HGS-216ENST00000576498 ARHGEF11O15085 1522 aa31.79■■■□□ 2.68
HGS-216ENST00000576498 SOGA1O94964 1423 aa31.77■■■□□ 2.68
HGS-216ENST00000576498 CUX1P39880 1505 aa31.76■■■□□ 2.68
HGS-216ENST00000576498 FGD5Q6ZNL6 1462 aa31.76■■■□□ 2.67
HGS-216ENST00000576498 CHD1O14646 1710 aa31.72■■■□□ 2.67
HGS-216ENST00000576498 TDRD9Q8NDG6 1382 aaKnown RBP31.72■■■□□ 2.67
HGS-216ENST00000576498 WDR97A6NE52 1622 aa31.68■■■□□ 2.66
HGS-216ENST00000576498 SNAPC4Q5SXM2 1469 aa31.59■■■□□ 2.65
HGS-216ENST00000576498 FBLN2P98095 1184 aa31.56■■■□□ 2.64
HGS-216ENST00000576498 WRNQ14191 1432 aaPredicted RBP eCLIP31.52■■■□□ 2.64
HGS-216ENST00000576498 MAGI1Q96QZ7 1491 aaPredicted RBP31.52■■■□□ 2.64
HGS-216ENST00000576498 GRIN2BQ13224 1484 aa31.51■■■□□ 2.63
HGS-216ENST00000576498 ARAP1Q96P48 1450 aa31.51■■■□□ 2.63
HGS-216ENST00000576498 TOP2BQ02880 1626 aa31.49■■■□□ 2.63
HGS-216ENST00000576498 BIVM-ERCC5R4GMW8 1640 aa31.48■■■□□ 2.63
HGS-216ENST00000576498 CLASP1Q7Z460 1538 aa31.48■■■□□ 2.63
HGS-216ENST00000576498 CYB5RLQ6IPT4 315 aa31.47■■■□□ 2.63
HGS-216ENST00000576498 ABCA10Q8WWZ4 1543 aa31.44■■■□□ 2.62
HGS-216ENST00000576498 SYNJ2O15056 1496 aa31.41■■■□□ 2.62
HGS-216ENST00000576498 GAPVD1Q14C86 1478 aa31.4■■■□□ 2.62
HGS-216ENST00000576498 CHMP7Q8WUX9 453 aaPredicted RBP31.39■■■□□ 2.62
HGS-216ENST00000576498 SYNJ1O43426 1573 aa31.39■■■□□ 2.61
HGS-216ENST00000576498 ABCA5Q8WWZ7 1642 aa31.37■■■□□ 2.61
HGS-216ENST00000576498 PBRM1Q86U86 1689 aa31.34■■■□□ 2.61
HGS-216ENST00000576498 GRIN2AQ12879 1464 aa31.13■■■□□ 2.57
HGS-216ENST00000576498 ADAMTS12P58397 1594 aa31.12■■■□□ 2.57
HGS-216ENST00000576498 ERICH3Q5RHP9 1530 aa31.1■■■□□ 2.57
HGS-216ENST00000576498 NUP160Q12769 1436 aa31.07■■■□□ 2.56
HGS-216ENST00000576498 TRHP20396 242 aaPredicted RBP31.03■■■□□ 2.56
HGS-216ENST00000576498 CEP170Q5SW79 1584 aa31.02■■■□□ 2.56
HGS-216ENST00000576498 FHAD1B1AJZ9 1412 aa31.01■■■□□ 2.55
HGS-216ENST00000576498 ERCC6L2Q5T890 1561 aa30.98■■■□□ 2.55
HGS-216ENST00000576498 KIF27Q86VH2 1401 aa30.93■■■□□ 2.54
HGS-216ENST00000576498 SHROOM2Q13796 1616 aa30.91■■■□□ 2.54
HGS-216ENST00000576498 IGF1RP08069 1367 aa30.78■■■□□ 2.52
HGS-216ENST00000576498 CUL7Q14999 1698 aa30.77■■■□□ 2.52
HGS-216ENST00000576498 RUSC2Q8N2Y8 1516 aa30.68■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 223.8 ms