RNA–Protein interactions for RNA: ENST00000576114.1

POLR2A-205, Transcript of RNA polymerase II subunit A, humanhuman

TSL 2

Gene POLR2A, Length 245 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-205ENST00000576114 NISCHQ9Y2I1 1504 aa19.04■□□□□ 0.64
POLR2A-205ENST00000576114 ABCC9O60706 1549 aa18.28■□□□□ 0.52
POLR2A-205ENST00000576114 DNAJC5BQ9UF47 199 aa18■□□□□ 0.47
POLR2A-205ENST00000576114 CCDC180Q9P1Z9 1646 aa17.52■□□□□ 0.4
POLR2A-205ENST00000576114 DNAJC5Q9H3Z4 198 aa17.12■□□□□ 0.33
POLR2A-205ENST00000576114 RB1CC1Q8TDY2 1594 aa17.03■□□□□ 0.32
POLR2A-205ENST00000576114 PABPN1Q86U42 306 aaKnown RBP eCLIP16.85■□□□□ 0.29
POLR2A-205ENST00000576114 UNC13AQ9UPW8 1703 aa16.84■□□□□ 0.29
POLR2A-205ENST00000576114 NACADO15069 1562 aa16.71■□□□□ 0.27
POLR2A-205ENST00000576114 BICRAQ9NZM4 1560 aa16.67■□□□□ 0.26
POLR2A-205ENST00000576114 CECR2Q9BXF3 1484 aa16.55■□□□□ 0.24
POLR2A-205ENST00000576114 CC2D2AQ9P2K1 1620 aa16.53■□□□□ 0.24
POLR2A-205ENST00000576114 DCAF8L2P0C7V8 631 aa16.31■□□□□ 0.2
POLR2A-205ENST00000576114 EIF4G1Q04637 1599 aaKnown RBP16.26■□□□□ 0.19
POLR2A-205ENST00000576114 SHROOM4Q9ULL8 1493 aa16.24■□□□□ 0.19
POLR2A-205ENST00000576114 MYO15BQ96JP2 1530 aa16.2■□□□□ 0.18
POLR2A-205ENST00000576114 CUX2O14529 1486 aa16.11■□□□□ 0.17
POLR2A-205ENST00000576114 TRIM41Q8WV44 630 aa15.92■□□□□ 0.14
POLR2A-205ENST00000576114 SCRIBQ14160 1630 aa15.84■□□□□ 0.13
POLR2A-205ENST00000576114 ERCC6Q03468 1493 aa15.78■□□□□ 0.12
POLR2A-205ENST00000576114 DCAF1Q9Y4B6 1507 aa15.68■□□□□ 0.1
POLR2A-205ENST00000576114 ZCCHC6Q5VYS8 1495 aaKnown RBP15.59■□□□□ 0.09
POLR2A-205ENST00000576114 THOC2Q8NI27 1593 aaKnown RBP15.56■□□□□ 0.08
POLR2A-205ENST00000576114 NESP48681 1621 aa15.5■□□□□ 0.07
POLR2A-205ENST00000576114 NCAPD3P42695 1498 aa15.44■□□□□ 0.06
POLR2A-205ENST00000576114 KIF21AQ7Z4S6 1674 aa15.35■□□□□ 0.05
POLR2A-205ENST00000576114 SMARCA2P51531 1590 aa15.31■□□□□ 0.04
POLR2A-205ENST00000576114 BAZ1AQ9NRL2 1556 aaPredicted RBP15.29■□□□□ 0.04
POLR2A-205ENST00000576114 ATAD2BQ9ULI0 1458 aa15.26■□□□□ 0.03
POLR2A-205ENST00000576114 HMGXB3Q12766 1538 aa15.25■□□□□ 0.03
POLR2A-205ENST00000576114 LAMC3Q9Y6N6 1575 aa15.24■□□□□ 0.03
POLR2A-205ENST00000576114 RIMBP3CA6NJZ7 1639 aa15.2■□□□□ 0.02
POLR2A-205ENST00000576114 RIMBP3BA6NNM3 1639 aa15.2■□□□□ 0.02
POLR2A-205ENST00000576114 RIMBP3Q9UFD9 1639 aa15.2■□□□□ 0.02
POLR2A-205ENST00000576114 OSCARQ8IYS5 282 aa15.19■□□□□ 0.02
POLR2A-205ENST00000576114 AEBP2Q6ZN18 517 aaPredicted RBP15.15■□□□□ 0.02
POLR2A-205ENST00000576114 PDS5BQ9NTI5 1447 aa15.1■□□□□ 0.01
POLR2A-205ENST00000576114 WDR62O43379 1518 aa15.1■□□□□ 0.01
POLR2A-205ENST00000576114 MRC2Q9UBG0 1479 aa15.07■□□□□ 0
POLR2A-205ENST00000576114 SMARCA4P51532 1647 aa15.06■□□□□ 0
POLR2A-205ENST00000576114 BAZ1BQ9UIG0 1483 aaKnown RBP15.03■□□□□ -0
POLR2A-205ENST00000576114 ARHGEF11O15085 1522 aa15.02□□□□□ -0.01
POLR2A-205ENST00000576114 TRHP20396 242 aaPredicted RBP14.96□□□□□ -0.01
POLR2A-205ENST00000576114 PEG3Q9GZU2 1588 aa14.94□□□□□ -0.02
POLR2A-205ENST00000576114 CYB5RLQ6IPT4 315 aa14.89□□□□□ -0.03
POLR2A-205ENST00000576114 CADPSQ9ULU8 1353 aa14.88□□□□□ -0.03
POLR2A-205ENST00000576114 CEP164Q9UPV0 1460 aa14.82□□□□□ -0.04
POLR2A-205ENST00000576114 ARAP1Q96P48 1450 aa14.81□□□□□ -0.04
POLR2A-205ENST00000576114 ILDR1Q86SU0 546 aaPredicted RBP14.76□□□□□ -0.05
POLR2A-205ENST00000576114 FANCD2Q9BXW9 1451 aa14.73□□□□□ -0.05
POLR2A-205ENST00000576114 URB2Q14146 1524 aaKnown RBP14.71□□□□□ -0.06
POLR2A-205ENST00000576114 CHD1O14646 1710 aa14.68□□□□□ -0.06
POLR2A-205ENST00000576114 MROH2BQ7Z745 1585 aa14.67□□□□□ -0.06
POLR2A-205ENST00000576114 ZNF608Q9ULD9 1512 aaPredicted RBP14.66□□□□□ -0.06
POLR2A-205ENST00000576114 RSF1Q96T23 1441 aaPredicted RBP14.61□□□□□ -0.07
POLR2A-205ENST00000576114 CFTRP13569 1480 aa14.57□□□□□ -0.08
POLR2A-205ENST00000576114 EIF4G3O43432 1585 aaKnown RBP14.56□□□□□ -0.08
POLR2A-205ENST00000576114 IFT140Q96RY7 1462 aa14.55□□□□□ -0.08
POLR2A-205ENST00000576114 PRDM2Q13029 1718 aa14.49□□□□□ -0.09
POLR2A-205ENST00000576114 WIZO95785 1651 aa14.49□□□□□ -0.09
POLR2A-205ENST00000576114 CLASP1Q7Z460 1538 aa14.43□□□□□ -0.1
POLR2A-205ENST00000576114 AQRO60306 1485 aaKnown RBP eCLIP14.39□□□□□ -0.112e-10■■■■■ 29.5
POLR2A-205ENST00000576114 TARBP1Q13395 1621 aaKnown RBP14.39□□□□□ -0.11
POLR2A-205ENST00000576114 TOPBP1Q92547 1522 aa14.38□□□□□ -0.11
POLR2A-205ENST00000576114 FBLN2P98095 1184 aa14.38□□□□□ -0.11
POLR2A-205ENST00000576114 KIF13AQ9H1H9 1805 aa14.38□□□□□ -0.11
POLR2A-205ENST00000576114 KDM4FA0A1W2PPD8 638 aa14.33□□□□□ -0.12
POLR2A-205ENST00000576114 GAPVD1Q14C86 1478 aa14.3□□□□□ -0.12
POLR2A-205ENST00000576114 SYNJ1O43426 1573 aa14.28□□□□□ -0.12
POLR2A-205ENST00000576114 ABCC8Q09428 1581 aa14.25□□□□□ -0.13
POLR2A-205ENST00000576114 DNMBPQ6XZF7 1577 aa14.25□□□□□ -0.13
POLR2A-205ENST00000576114 SNAPC4Q5SXM2 1469 aa14.2□□□□□ -0.14
POLR2A-205ENST00000576114 TOP2AP11388 1531 aaKnown RBP14.18□□□□□ -0.14
POLR2A-205ENST00000576114 POLA1P09884 1462 aaPredicted RBP14.18□□□□□ -0.14
POLR2A-205ENST00000576114 ERCC6L2Q5T890 1561 aa14.17□□□□□ -0.14
POLR2A-205ENST00000576114 TDRD9Q8NDG6 1382 aaKnown RBP14.14□□□□□ -0.15
POLR2A-205ENST00000576114 CHMP7Q8WUX9 453 aaPredicted RBP14.14□□□□□ -0.15
POLR2A-205ENST00000576114 MAGI1Q96QZ7 1491 aaPredicted RBP14.13□□□□□ -0.15
POLR2A-205ENST00000576114 RAD54L2Q9Y4B4 1467 aa14.13□□□□□ -0.15
POLR2A-205ENST00000576114 WDR97A6NE52 1622 aa14.12□□□□□ -0.15
POLR2A-205ENST00000576114 SYNJ2O15056 1496 aa14.11□□□□□ -0.15
POLR2A-205ENST00000576114 HECW2Q9P2P5 1572 aa14.1□□□□□ -0.15
POLR2A-205ENST00000576114 KDM6BO15054 1643 aa14.08□□□□□ -0.16
POLR2A-205ENST00000576114 FBXO41Q8TF61 875 aa14.05□□□□□ -0.16
POLR2A-205ENST00000576114 SOGA1O94964 1423 aa14.05□□□□□ -0.16
POLR2A-205ENST00000576114 CCDC88BA6NC98 1476 aa14.03□□□□□ -0.16
POLR2A-205ENST00000576114 GRIN2BQ13224 1484 aa14.03□□□□□ -0.16
POLR2A-205ENST00000576114 PBRM1Q86U86 1689 aa14.03□□□□□ -0.16
POLR2A-205ENST00000576114 TSPOAP1O95153 1857 aa14.02□□□□□ -0.16
POLR2A-205ENST00000576114 CEP170Q5SW79 1584 aa14.02□□□□□ -0.16
POLR2A-205ENST00000576114 ABCC10Q5T3U5 1492 aa14.02□□□□□ -0.16
POLR2A-205ENST00000576114 DIP2BQ9P265 1576 aa14□□□□□ -0.17
POLR2A-205ENST00000576114 ADGRL1O94910 1474 aa13.99□□□□□ -0.17
POLR2A-205ENST00000576114 SHROOM2Q13796 1616 aa13.98□□□□□ -0.17
POLR2A-205ENST00000576114 FAM69CQ0P6D2 419 aa13.98□□□□□ -0.17
POLR2A-205ENST00000576114 FGD5Q6ZNL6 1462 aa13.95□□□□□ -0.18
POLR2A-205ENST00000576114 LMTK3Q96Q04 1460 aa13.95□□□□□ -0.18
POLR2A-205ENST00000576114 MAPKBP1O60336 1514 aa13.92□□□□□ -0.18
POLR2A-205ENST00000576114 NUP160Q12769 1436 aa13.88□□□□□ -0.19
POLR2A-205ENST00000576114 GRIN2AQ12879 1464 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms