RNA–Protein interactions for RNA: ENST00000575975.5

ARHGAP17-219, Transcript of Rho GTPase activating protein 17, humanhuman

TSL 1 (best)

Gene ARHGAP17, Length 681 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP17-219ENST00000575975 NISCHQ9Y2I1 1504 aa17.71■□□□□ 0.43
ARHGAP17-219ENST00000575975 ABCC9O60706 1549 aa16.45■□□□□ 0.22
ARHGAP17-219ENST00000575975 AEBP2Q6ZN18 517 aaPredicted RBP16.25■□□□□ 0.19
ARHGAP17-219ENST00000575975 CCDC180Q9P1Z9 1646 aa15.96■□□□□ 0.15
ARHGAP17-219ENST00000575975 DNAJC5BQ9UF47 199 aa15.9■□□□□ 0.14
ARHGAP17-219ENST00000575975 CHIC1Q5VXU3 224 aa15.76■□□□□ 0.11
ARHGAP17-219ENST00000575975 RB1CC1Q8TDY2 1594 aa15.45■□□□□ 0.06
ARHGAP17-219ENST00000575975 PABPN1Q86U42 306 aaKnown RBP eCLIP15.33■□□□□ 0.04
ARHGAP17-219ENST00000575975 NACADO15069 1562 aa15.28■□□□□ 0.04
ARHGAP17-219ENST00000575975 DCAF8L2P0C7V8 631 aa15.18■□□□□ 0.02
ARHGAP17-219ENST00000575975 BICRAQ9NZM4 1560 aa15.02■□□□□ -0
ARHGAP17-219ENST00000575975 UNC13AQ9UPW8 1703 aa14.97□□□□□ -0.01
ARHGAP17-219ENST00000575975 MYO15BQ96JP2 1530 aa14.97□□□□□ -0.01
ARHGAP17-219ENST00000575975 DNAJC5Q9H3Z4 198 aa14.92□□□□□ -0.02
ARHGAP17-219ENST00000575975 CECR2Q9BXF3 1484 aa14.89□□□□□ -0.03
ARHGAP17-219ENST00000575975 SHROOM4Q9ULL8 1493 aa14.81□□□□□ -0.04
ARHGAP17-219ENST00000575975 CC2D2AQ9P2K1 1620 aa14.81□□□□□ -0.04
ARHGAP17-219ENST00000575975 EIF4G1Q04637 1599 aaKnown RBP14.68□□□□□ -0.06
ARHGAP17-219ENST00000575975 DCAF1Q9Y4B6 1507 aa14.61□□□□□ -0.07
ARHGAP17-219ENST00000575975 ZCCHC6Q5VYS8 1495 aaKnown RBP14.56□□□□□ -0.08
ARHGAP17-219ENST00000575975 SCRIBQ14160 1630 aa14.52□□□□□ -0.08
ARHGAP17-219ENST00000575975 CUX2O14529 1486 aa14.37□□□□□ -0.11
ARHGAP17-219ENST00000575975 ERCC6Q03468 1493 aa14.23□□□□□ -0.13
ARHGAP17-219ENST00000575975 NCAPD3P42695 1498 aa14.17□□□□□ -0.14
ARHGAP17-219ENST00000575975 ATAD2BQ9ULI0 1458 aa14.04□□□□□ -0.16
ARHGAP17-219ENST00000575975 TRIM41Q8WV44 630 aa14.02□□□□□ -0.17
ARHGAP17-219ENST00000575975 NESP48681 1621 aa14.01□□□□□ -0.17
ARHGAP17-219ENST00000575975 SENP3Q9H4L4 574 aaPredicted RBP13.98□□□□□ -0.17
ARHGAP17-219ENST00000575975 HMGXB3Q12766 1538 aa13.94□□□□□ -0.18
ARHGAP17-219ENST00000575975 SMARCA2P51531 1590 aa13.93□□□□□ -0.18
ARHGAP17-219ENST00000575975 THOC2Q8NI27 1593 aaKnown RBP13.89□□□□□ -0.19
ARHGAP17-219ENST00000575975 SMARCA4P51532 1647 aa13.84□□□□□ -0.19
ARHGAP17-219ENST00000575975 BAZ1BQ9UIG0 1483 aaKnown RBP13.84□□□□□ -0.19
ARHGAP17-219ENST00000575975 PDS5BQ9NTI5 1447 aa13.83□□□□□ -0.2
ARHGAP17-219ENST00000575975 LAMC3Q9Y6N6 1575 aa13.83□□□□□ -0.2
ARHGAP17-219ENST00000575975 PHF23Q9BUL5 403 aaPredicted RBP13.79□□□□□ -0.2
ARHGAP17-219ENST00000575975 PEG3Q9GZU2 1588 aa13.75□□□□□ -0.21
ARHGAP17-219ENST00000575975 BAZ1AQ9NRL2 1556 aaPredicted RBP13.75□□□□□ -0.21
ARHGAP17-219ENST00000575975 OSCARQ8IYS5 282 aa13.73□□□□□ -0.21
ARHGAP17-219ENST00000575975 CADPSQ9ULU8 1353 aa13.72□□□□□ -0.21
ARHGAP17-219ENST00000575975 KIF21AQ7Z4S6 1674 aa13.71□□□□□ -0.21
ARHGAP17-219ENST00000575975 MRC2Q9UBG0 1479 aa13.69□□□□□ -0.22
ARHGAP17-219ENST00000575975 WDR62O43379 1518 aa13.66□□□□□ -0.22
ARHGAP17-219ENST00000575975 MROH2BQ7Z745 1585 aa13.62□□□□□ -0.23
ARHGAP17-219ENST00000575975 CEP164Q9UPV0 1460 aa13.55□□□□□ -0.24
ARHGAP17-219ENST00000575975 FANCD2Q9BXW9 1451 aa13.51□□□□□ -0.25
ARHGAP17-219ENST00000575975 CFTRP13569 1480 aa13.46□□□□□ -0.25
ARHGAP17-219ENST00000575975 RIMBP3CA6NJZ7 1639 aa13.44□□□□□ -0.26
ARHGAP17-219ENST00000575975 RIMBP3BA6NNM3 1639 aa13.44□□□□□ -0.26
ARHGAP17-219ENST00000575975 RIMBP3Q9UFD9 1639 aa13.44□□□□□ -0.26
ARHGAP17-219ENST00000575975 CYB5RLQ6IPT4 315 aa13.42□□□□□ -0.26
ARHGAP17-219ENST00000575975 URB2Q14146 1524 aaKnown RBP13.42□□□□□ -0.26
ARHGAP17-219ENST00000575975 ARHGEF11O15085 1522 aa13.39□□□□□ -0.27
ARHGAP17-219ENST00000575975 WIZO95785 1651 aa13.39□□□□□ -0.27
ARHGAP17-219ENST00000575975 TRHP20396 242 aaPredicted RBP13.37□□□□□ -0.27
ARHGAP17-219ENST00000575975 ZNF608Q9ULD9 1512 aaPredicted RBP13.33□□□□□ -0.28
ARHGAP17-219ENST00000575975 IFT140Q96RY7 1462 aa13.32□□□□□ -0.28
ARHGAP17-219ENST00000575975 ARAP1Q96P48 1450 aa13.24□□□□□ -0.29
ARHGAP17-219ENST00000575975 RSF1Q96T23 1441 aaPredicted RBP13.24□□□□□ -0.29
ARHGAP17-219ENST00000575975 TOP2AP11388 1531 aaKnown RBP13.21□□□□□ -0.29
ARHGAP17-219ENST00000575975 TOPBP1Q92547 1522 aa13.19□□□□□ -0.3
ARHGAP17-219ENST00000575975 FBLN2P98095 1184 aa13.19□□□□□ -0.3
ARHGAP17-219ENST00000575975 AQRO60306 1485 aaKnown RBP eCLIP13.18□□□□□ -0.32e-6■■■■■ 33.9
ARHGAP17-219ENST00000575975 ABCC8Q09428 1581 aa13.18□□□□□ -0.3
ARHGAP17-219ENST00000575975 EIF4G3O43432 1585 aaKnown RBP13.15□□□□□ -0.3
ARHGAP17-219ENST00000575975 CCDC88BA6NC98 1476 aa13.13□□□□□ -0.31
ARHGAP17-219ENST00000575975 TARBP1Q13395 1621 aaKnown RBP13.09□□□□□ -0.31
ARHGAP17-219ENST00000575975 CHD1O14646 1710 aa13.08□□□□□ -0.32
ARHGAP17-219ENST00000575975 DNMBPQ6XZF7 1577 aa13.08□□□□□ -0.32
ARHGAP17-219ENST00000575975 PRDM2Q13029 1718 aa13.08□□□□□ -0.32
ARHGAP17-219ENST00000575975 CHMP7Q8WUX9 453 aaPredicted RBP13.05□□□□□ -0.32
ARHGAP17-219ENST00000575975 TDRD9Q8NDG6 1382 aaKnown RBP13.05□□□□□ -0.32
ARHGAP17-219ENST00000575975 POLA1P09884 1462 aaPredicted RBP13.04□□□□□ -0.32
ARHGAP17-219ENST00000575975 SOGA1O94964 1423 aa13.03□□□□□ -0.32
ARHGAP17-219ENST00000575975 RAD54L2Q9Y4B4 1467 aa13.02□□□□□ -0.33
ARHGAP17-219ENST00000575975 CLASP1Q7Z460 1538 aa13.02□□□□□ -0.33
ARHGAP17-219ENST00000575975 SNAPC4Q5SXM2 1469 aa12.99□□□□□ -0.33
ARHGAP17-219ENST00000575975 SYNJ1O43426 1573 aa12.97□□□□□ -0.33
ARHGAP17-219ENST00000575975 MAGI1Q96QZ7 1491 aaPredicted RBP12.96□□□□□ -0.34
ARHGAP17-219ENST00000575975 GAPVD1Q14C86 1478 aa12.95□□□□□ -0.34
ARHGAP17-219ENST00000575975 SYNJ2O15056 1496 aa12.93□□□□□ -0.34
ARHGAP17-219ENST00000575975 GRIN2BQ13224 1484 aa12.92□□□□□ -0.34
ARHGAP17-219ENST00000575975 WDR97A6NE52 1622 aa12.92□□□□□ -0.34
ARHGAP17-219ENST00000575975 FOXD1Q16676 465 aa12.91□□□□□ -0.34
ARHGAP17-219ENST00000575975 FGD5Q6ZNL6 1462 aa12.89□□□□□ -0.35
ARHGAP17-219ENST00000575975 CUX1P39880 1505 aa12.82□□□□□ -0.36
ARHGAP17-219ENST00000575975 ERCC6L2Q5T890 1561 aa12.78□□□□□ -0.36
ARHGAP17-219ENST00000575975 ILDR1Q86SU0 546 aaPredicted RBP12.77□□□□□ -0.37
ARHGAP17-219ENST00000575975 PLPPR3Q6T4P5 718 aa12.76□□□□□ -0.37
ARHGAP17-219ENST00000575975 KDM4FA0A1W2PPD8 638 aa12.75□□□□□ -0.37
ARHGAP17-219ENST00000575975 NUP160Q12769 1436 aa12.75□□□□□ -0.37
ARHGAP17-219ENST00000575975 ABCA10Q8WWZ4 1543 aa12.74□□□□□ -0.37
ARHGAP17-219ENST00000575975 GRIN2AQ12879 1464 aa12.74□□□□□ -0.37
ARHGAP17-219ENST00000575975 FAM69CQ0P6D2 419 aa12.73□□□□□ -0.37
ARHGAP17-219ENST00000575975 CEP170Q5SW79 1584 aa12.73□□□□□ -0.37
ARHGAP17-219ENST00000575975 PBRM1Q86U86 1689 aa12.7□□□□□ -0.38
ARHGAP17-219ENST00000575975 ABCA5Q8WWZ7 1642 aa12.7□□□□□ -0.38
ARHGAP17-219ENST00000575975 ABCC10Q5T3U5 1492 aa12.68□□□□□ -0.38
ARHGAP17-219ENST00000575975 NPM1P06748 294 aaKnown RBP eCLIP12.68□□□□□ -0.38
ARHGAP17-219ENST00000575975 JPH4Q96JJ6 628 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms