RNA–Protein interactions for RNA: ENST00000575836.1

TNFRSF12A-207, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 3

Gene TNFRSF12A, Length 161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-207ENST00000575836 NISCHQ9Y2I1 1504 aa37.11■■■■□ 3.53
TNFRSF12A-207ENST00000575836 CCDC180Q9P1Z9 1646 aa32.94■■■□□ 2.86
TNFRSF12A-207ENST00000575836 ABCC9O60706 1549 aa32.13■■■□□ 2.73
TNFRSF12A-207ENST00000575836 DCAF8L2P0C7V8 631 aa31.02■■■□□ 2.56
TNFRSF12A-207ENST00000575836 NACADO15069 1562 aa30.97■■■□□ 2.55
TNFRSF12A-207ENST00000575836 RB1CC1Q8TDY2 1594 aa30.97■■■□□ 2.55
TNFRSF12A-207ENST00000575836 ZCCHC6Q5VYS8 1495 aaKnown RBP30.94■■■□□ 2.54
TNFRSF12A-207ENST00000575836 MYO15BQ96JP2 1530 aa30.83■■■□□ 2.53
TNFRSF12A-207ENST00000575836 DCAF1Q9Y4B6 1507 aa30.73■■■□□ 2.51
TNFRSF12A-207ENST00000575836 UNC13AQ9UPW8 1703 aa30.19■■■□□ 2.42
TNFRSF12A-207ENST00000575836 SCRIBQ14160 1630 aa30.06■■■□□ 2.4
TNFRSF12A-207ENST00000575836 PABPN1Q86U42 306 aaKnown RBP eCLIP30.05■■■□□ 2.4
TNFRSF12A-207ENST00000575836 BICRAQ9NZM4 1560 aa29.97■■■□□ 2.39
TNFRSF12A-207ENST00000575836 SHROOM4Q9ULL8 1493 aa29.75■■■□□ 2.35
TNFRSF12A-207ENST00000575836 DNAJC5BQ9UF47 199 aa29.35■■■□□ 2.29
TNFRSF12A-207ENST00000575836 EIF4G1Q04637 1599 aaKnown RBP29.21■■■□□ 2.27
TNFRSF12A-207ENST00000575836 CC2D2AQ9P2K1 1620 aa29.05■■■□□ 2.24
TNFRSF12A-207ENST00000575836 CECR2Q9BXF3 1484 aa28.88■■■□□ 2.21
TNFRSF12A-207ENST00000575836 BAZ1AQ9NRL2 1556 aaPredicted RBP28.78■■■□□ 2.2
TNFRSF12A-207ENST00000575836 SMARCA4P51532 1647 aa28.76■■■□□ 2.2
TNFRSF12A-207ENST00000575836 ATAD2BQ9ULI0 1458 aa28.59■■■□□ 2.17
TNFRSF12A-207ENST00000575836 SMARCA2P51531 1590 aa28.58■■■□□ 2.17
TNFRSF12A-207ENST00000575836 MROH2BQ7Z745 1585 aa28.58■■■□□ 2.17
TNFRSF12A-207ENST00000575836 NCAPD3P42695 1498 aa28.57■■■□□ 2.16
TNFRSF12A-207ENST00000575836 PEG3Q9GZU2 1588 aa28.49■■■□□ 2.15
TNFRSF12A-207ENST00000575836 HMGXB3Q12766 1538 aa28.43■■■□□ 2.14
TNFRSF12A-207ENST00000575836 BAZ1BQ9UIG0 1483 aaKnown RBP28.39■■■□□ 2.13
TNFRSF12A-207ENST00000575836 RSF1Q96T23 1441 aaPredicted RBP28.32■■■□□ 2.12
TNFRSF12A-207ENST00000575836 WIZO95785 1651 aa28.27■■■□□ 2.12
TNFRSF12A-207ENST00000575836 TOP2AP11388 1531 aaKnown RBP28.02■■■□□ 2.08
TNFRSF12A-207ENST00000575836 NESP48681 1621 aa27.81■■■□□ 2.04
TNFRSF12A-207ENST00000575836 LAMC3Q9Y6N6 1575 aa27.8■■■□□ 2.04
TNFRSF12A-207ENST00000575836 CADPSQ9ULU8 1353 aa27.75■■■□□ 2.03
TNFRSF12A-207ENST00000575836 SUPT5HO00267 1087 aaKnown RBP27.73■■■□□ 2.03
TNFRSF12A-207ENST00000575836 ERCC6Q03468 1493 aa27.72■■■□□ 2.03
TNFRSF12A-207ENST00000575836 CCDC88BA6NC98 1476 aa27.68■■■□□ 2.02
TNFRSF12A-207ENST00000575836 PDS5BQ9NTI5 1447 aa27.64■■■□□ 2.02
TNFRSF12A-207ENST00000575836 CFTRP13569 1480 aa27.6■■■□□ 2.01
TNFRSF12A-207ENST00000575836 KIF21AQ7Z4S6 1674 aa27.47■■□□□ 1.99
TNFRSF12A-207ENST00000575836 FANCD2Q9BXW9 1451 aa27.43■■□□□ 1.98
TNFRSF12A-207ENST00000575836 CEP164Q9UPV0 1460 aa27.39■■□□□ 1.98
TNFRSF12A-207ENST00000575836 CUX2O14529 1486 aa27.38■■□□□ 1.97
TNFRSF12A-207ENST00000575836 PRDM2Q13029 1718 aa27.36■■□□□ 1.97
TNFRSF12A-207ENST00000575836 THOC2Q8NI27 1593 aaKnown RBP27.36■■□□□ 1.97
TNFRSF12A-207ENST00000575836 MRC2Q9UBG0 1479 aa27.32■■□□□ 1.96
TNFRSF12A-207ENST00000575836 WDR62O43379 1518 aa27.21■■□□□ 1.95
TNFRSF12A-207ENST00000575836 URB2Q14146 1524 aaKnown RBP27.12■■□□□ 1.93
TNFRSF12A-207ENST00000575836 ABCC8Q09428 1581 aa27.05■■□□□ 1.92
TNFRSF12A-207ENST00000575836 TOPBP1Q92547 1522 aa27■■□□□ 1.91
TNFRSF12A-207ENST00000575836 DNMBPQ6XZF7 1577 aa26.97■■□□□ 1.91
TNFRSF12A-207ENST00000575836 IFT140Q96RY7 1462 aa26.82■■□□□ 1.88
TNFRSF12A-207ENST00000575836 CUX1P39880 1505 aa26.81■■□□□ 1.88
TNFRSF12A-207ENST00000575836 POLA1P09884 1462 aaPredicted RBP26.77■■□□□ 1.88
TNFRSF12A-207ENST00000575836 FGD5Q6ZNL6 1462 aa26.73■■□□□ 1.87
TNFRSF12A-207ENST00000575836 WRNQ14191 1432 aaPredicted RBP eCLIP26.73■■□□□ 1.87
TNFRSF12A-207ENST00000575836 SOGA1O94964 1423 aa26.69■■□□□ 1.86
TNFRSF12A-207ENST00000575836 TARBP1Q13395 1621 aaKnown RBP26.66■■□□□ 1.86
TNFRSF12A-207ENST00000575836 ZNF608Q9ULD9 1512 aaPredicted RBP26.65■■□□□ 1.86
TNFRSF12A-207ENST00000575836 RAD54L2Q9Y4B4 1467 aa26.64■■□□□ 1.86
TNFRSF12A-207ENST00000575836 TOP2BQ02880 1626 aa26.62■■□□□ 1.85
TNFRSF12A-207ENST00000575836 BIVM-ERCC5R4GMW8 1640 aa26.61■■□□□ 1.85
TNFRSF12A-207ENST00000575836 SYNJ1O43426 1573 aa26.6■■□□□ 1.85
TNFRSF12A-207ENST00000575836 EIF4G3O43432 1585 aaKnown RBP26.55■■□□□ 1.84
TNFRSF12A-207ENST00000575836 AQRO60306 1485 aaKnown RBP eCLIP26.53■■□□□ 1.841e-6■■■■■ 36.5
TNFRSF12A-207ENST00000575836 TDRD9Q8NDG6 1382 aaKnown RBP26.51■■□□□ 1.83
TNFRSF12A-207ENST00000575836 WDR97A6NE52 1622 aa26.5■■□□□ 1.83
TNFRSF12A-207ENST00000575836 ABCA10Q8WWZ4 1543 aa26.48■■□□□ 1.83
TNFRSF12A-207ENST00000575836 DNAJC5Q9H3Z4 198 aa26.4■■□□□ 1.82
TNFRSF12A-207ENST00000575836 GAPVD1Q14C86 1478 aa26.37■■□□□ 1.81
TNFRSF12A-207ENST00000575836 GRIN2BQ13224 1484 aa26.36■■□□□ 1.81
TNFRSF12A-207ENST00000575836 ABCA5Q8WWZ7 1642 aa26.34■■□□□ 1.81
TNFRSF12A-207ENST00000575836 SNAPC4Q5SXM2 1469 aa26.3■■□□□ 1.8
TNFRSF12A-207ENST00000575836 OSCARQ8IYS5 282 aa26.29■■□□□ 1.8
TNFRSF12A-207ENST00000575836 MAGI1Q96QZ7 1491 aaPredicted RBP26.29■■□□□ 1.8
TNFRSF12A-207ENST00000575836 PBRM1Q86U86 1689 aa26.27■■□□□ 1.8
TNFRSF12A-207ENST00000575836 FBLN2P98095 1184 aa26.24■■□□□ 1.79
TNFRSF12A-207ENST00000575836 TRIM41Q8WV44 630 aa26.21■■□□□ 1.79
TNFRSF12A-207ENST00000575836 CHMP7Q8WUX9 453 aaPredicted RBP26.19■■□□□ 1.78
TNFRSF12A-207ENST00000575836 KIF27Q86VH2 1401 aa26.18■■□□□ 1.78
TNFRSF12A-207ENST00000575836 SYNJ2O15056 1496 aa26.17■■□□□ 1.78
TNFRSF12A-207ENST00000575836 CHD1O14646 1710 aa26.17■■□□□ 1.78
TNFRSF12A-207ENST00000575836 ERICH3Q5RHP9 1530 aa26.17■■□□□ 1.78
TNFRSF12A-207ENST00000575836 ADAMTS12P58397 1594 aa26.09■■□□□ 1.77
TNFRSF12A-207ENST00000575836 FHAD1B1AJZ9 1412 aa26.09■■□□□ 1.77
TNFRSF12A-207ENST00000575836 IGF1RP08069 1367 aa26.03■■□□□ 1.76
TNFRSF12A-207ENST00000575836 GRIN2AQ12879 1464 aa26.01■■□□□ 1.75
TNFRSF12A-207ENST00000575836 CUL7Q14999 1698 aa25.95■■□□□ 1.74
TNFRSF12A-207ENST00000575836 CHIC1Q5VXU3 224 aa25.92■■□□□ 1.74
TNFRSF12A-207ENST00000575836 CLASP1Q7Z460 1538 aa25.91■■□□□ 1.74
TNFRSF12A-207ENST00000575836 RUSC2Q8N2Y8 1516 aa25.9■■□□□ 1.74
TNFRSF12A-207ENST00000575836 CARMIL1Q5VZK9 1371 aa25.9■■□□□ 1.74
TNFRSF12A-207ENST00000575836 NUP160Q12769 1436 aa25.88■■□□□ 1.73
TNFRSF12A-207ENST00000575836 CEP170Q5SW79 1584 aa25.85■■□□□ 1.73
TNFRSF12A-207ENST00000575836 ARHGEF11O15085 1522 aa25.82■■□□□ 1.72
TNFRSF12A-207ENST00000575836 RIMBP3CA6NJZ7 1639 aa25.79■■□□□ 1.72
TNFRSF12A-207ENST00000575836 RIMBP3BA6NNM3 1639 aa25.79■■□□□ 1.72
TNFRSF12A-207ENST00000575836 RIMBP3Q9UFD9 1639 aa25.79■■□□□ 1.72
TNFRSF12A-207ENST00000575836 EEA1Q15075 1411 aa25.77■■□□□ 1.72
TNFRSF12A-207ENST00000575836 RAPGEF2Q9Y4G8 1499 aa25.75■■□□□ 1.71
TNFRSF12A-207ENST00000575836 CSRNP3Q8WYN3 585 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms