RNA–Protein interactions for RNA: ENST00000575707.5

TRAP1-213, Transcript of TNF receptor associated protein 1, humanhuman

TSL 5

Gene TRAP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-213ENST00000575707 NISCHQ9Y2I1 1504 aa41.25■■■■■ 4.19
TRAP1-213ENST00000575707 CCDC180Q9P1Z9 1646 aa36.97■■■■□ 3.51
TRAP1-213ENST00000575707 ABCC9O60706 1549 aa36.71■■■■□ 3.47
TRAP1-213ENST00000575707 RB1CC1Q8TDY2 1594 aa35.08■■■■□ 3.21
TRAP1-213ENST00000575707 NACADO15069 1562 aa34.9■■■■□ 3.18
TRAP1-213ENST00000575707 DCAF8L2P0C7V8 631 aa34.64■■■■□ 3.14
TRAP1-213ENST00000575707 MYO15BQ96JP2 1530 aa34.51■■■■□ 3.12
TRAP1-213ENST00000575707 UNC13AQ9UPW8 1703 aa34.3■■■■□ 3.08
TRAP1-213ENST00000575707 DNAJC5BQ9UF47 199 aa34.25■■■■□ 3.07
TRAP1-213ENST00000575707 ZCCHC6Q5VYS8 1495 aaKnown RBP34.24■■■■□ 3.07
TRAP1-213ENST00000575707 PABPN1Q86U42 306 aaKnown RBP eCLIP34.18■■■■□ 3.064e-6■□□□□ 9.3
TRAP1-213ENST00000575707 DCAF1Q9Y4B6 1507 aa34.13■■■■□ 3.05
TRAP1-213ENST00000575707 BICRAQ9NZM4 1560 aa34.05■■■■□ 3.04
TRAP1-213ENST00000575707 SHROOM4Q9ULL8 1493 aa33.67■■■□□ 2.98
TRAP1-213ENST00000575707 SCRIBQ14160 1630 aa33.64■■■□□ 2.98
TRAP1-213ENST00000575707 CC2D2AQ9P2K1 1620 aa33.2■■■□□ 2.91
TRAP1-213ENST00000575707 EIF4G1Q04637 1599 aaKnown RBP33.2■■■□□ 2.91
TRAP1-213ENST00000575707 CECR2Q9BXF3 1484 aa33.07■■■□□ 2.88
TRAP1-213ENST00000575707 NCAPD3P42695 1498 aa32.21■■■□□ 2.75
TRAP1-213ENST00000575707 SMARCA4P51532 1647 aa32.15■■■□□ 2.74
TRAP1-213ENST00000575707 ATAD2BQ9ULI0 1458 aa32.11■■■□□ 2.73
TRAP1-213ENST00000575707 SMARCA2P51531 1590 aa32.07■■■□□ 2.72
TRAP1-213ENST00000575707 BAZ1AQ9NRL2 1556 aaPredicted RBP32.02■■■□□ 2.72
TRAP1-213ENST00000575707 HMGXB3Q12766 1538 aa32■■■□□ 2.71
TRAP1-213ENST00000575707 PEG3Q9GZU2 1588 aa31.86■■■□□ 2.69
TRAP1-213ENST00000575707 BAZ1BQ9UIG0 1483 aaKnown RBP31.82■■■□□ 2.68
TRAP1-213ENST00000575707 MROH2BQ7Z745 1585 aa31.77■■■□□ 2.68
TRAP1-213ENST00000575707 ERCC6Q03468 1493 aa31.7■■■□□ 2.66
TRAP1-213ENST00000575707 CUX2O14529 1486 aa31.63■■■□□ 2.65
TRAP1-213ENST00000575707 NESP48681 1621 aa31.6■■■□□ 2.65
TRAP1-213ENST00000575707 LAMC3Q9Y6N6 1575 aa31.46■■■□□ 2.63
TRAP1-213ENST00000575707 WIZO95785 1651 aa31.4■■■□□ 2.62
TRAP1-213ENST00000575707 DNAJC5Q9H3Z4 198 aa31.35■■■□□ 2.61
TRAP1-213ENST00000575707 THOC2Q8NI27 1593 aaKnown RBP31.29■■■□□ 2.6
TRAP1-213ENST00000575707 PDS5BQ9NTI5 1447 aa31.25■■■□□ 2.59
TRAP1-213ENST00000575707 KIF21AQ7Z4S6 1674 aa31.23■■■□□ 2.59
TRAP1-213ENST00000575707 CADPSQ9ULU8 1353 aa31.22■■■□□ 2.59
TRAP1-213ENST00000575707 RSF1Q96T23 1441 aaPredicted RBP31.18■■■□□ 2.58
TRAP1-213ENST00000575707 TOP2AP11388 1531 aaKnown RBP31.03■■■□□ 2.56
TRAP1-213ENST00000575707 MRC2Q9UBG0 1479 aa30.97■■■□□ 2.55
TRAP1-213ENST00000575707 CFTRP13569 1480 aa30.92■■■□□ 2.54
TRAP1-213ENST00000575707 WDR62O43379 1518 aa30.91■■■□□ 2.54
TRAP1-213ENST00000575707 CEP164Q9UPV0 1460 aa30.89■■■□□ 2.53
TRAP1-213ENST00000575707 FANCD2Q9BXW9 1451 aa30.86■■■□□ 2.53
TRAP1-213ENST00000575707 CCDC88BA6NC98 1476 aa30.66■■■□□ 2.5
TRAP1-213ENST00000575707 PRDM2Q13029 1718 aa30.65■■■□□ 2.5
TRAP1-213ENST00000575707 URB2Q14146 1524 aaKnown RBP30.59■■■□□ 2.49
TRAP1-213ENST00000575707 TOPBP1Q92547 1522 aa30.3■■■□□ 2.44
TRAP1-213ENST00000575707 ABCC8Q09428 1581 aa30.28■■■□□ 2.44
TRAP1-213ENST00000575707 IFT140Q96RY7 1462 aa30.27■■■□□ 2.44
TRAP1-213ENST00000575707 DNMBPQ6XZF7 1577 aa30.22■■■□□ 2.43
TRAP1-213ENST00000575707 OSCARQ8IYS5 282 aa30.17■■■□□ 2.42
TRAP1-213ENST00000575707 ZNF608Q9ULD9 1512 aaPredicted RBP30.17■■■□□ 2.42
TRAP1-213ENST00000575707 EIF4G3O43432 1585 aaKnown RBP30.04■■■□□ 2.4
TRAP1-213ENST00000575707 TARBP1Q13395 1621 aaKnown RBP30.04■■■□□ 2.4
TRAP1-213ENST00000575707 POLA1P09884 1462 aaPredicted RBP30■■■□□ 2.39
TRAP1-213ENST00000575707 TRIM41Q8WV44 630 aa30■■■□□ 2.39
TRAP1-213ENST00000575707 AQRO60306 1485 aaKnown RBP eCLIP29.91■■■□□ 2.385e-7■■■■■ 38
TRAP1-213ENST00000575707 RAD54L2Q9Y4B4 1467 aa29.87■■■□□ 2.37
TRAP1-213ENST00000575707 SUPT5HO00267 1087 aaKnown RBP29.86■■■□□ 2.37
TRAP1-213ENST00000575707 SOGA1O94964 1423 aa29.86■■■□□ 2.37
TRAP1-213ENST00000575707 CUX1P39880 1505 aa29.84■■■□□ 2.37
TRAP1-213ENST00000575707 FGD5Q6ZNL6 1462 aa29.83■■■□□ 2.37
TRAP1-213ENST00000575707 WDR97A6NE52 1622 aa29.78■■■□□ 2.36
TRAP1-213ENST00000575707 CHD1O14646 1710 aa29.78■■■□□ 2.36
TRAP1-213ENST00000575707 RIMBP3CA6NJZ7 1639 aa29.77■■■□□ 2.36
TRAP1-213ENST00000575707 RIMBP3BA6NNM3 1639 aa29.77■■■□□ 2.36
TRAP1-213ENST00000575707 RIMBP3Q9UFD9 1639 aa29.77■■■□□ 2.36
TRAP1-213ENST00000575707 TDRD9Q8NDG6 1382 aaKnown RBP29.75■■■□□ 2.35
TRAP1-213ENST00000575707 ARHGEF11O15085 1522 aa29.71■■■□□ 2.35
TRAP1-213ENST00000575707 FBLN2P98095 1184 aa29.64■■■□□ 2.34
TRAP1-213ENST00000575707 SNAPC4Q5SXM2 1469 aa29.63■■■□□ 2.33
TRAP1-213ENST00000575707 GRIN2BQ13224 1484 aa29.6■■■□□ 2.33
TRAP1-213ENST00000575707 MAGI1Q96QZ7 1491 aaPredicted RBP29.59■■■□□ 2.33
TRAP1-213ENST00000575707 ABCA10Q8WWZ4 1543 aa29.53■■■□□ 2.32
TRAP1-213ENST00000575707 GAPVD1Q14C86 1478 aa29.51■■■□□ 2.31
TRAP1-213ENST00000575707 PBRM1Q86U86 1689 aa29.5■■■□□ 2.31
TRAP1-213ENST00000575707 CHMP7Q8WUX9 453 aaPredicted RBP29.49■■■□□ 2.31
TRAP1-213ENST00000575707 SYNJ2O15056 1496 aa29.48■■■□□ 2.31
TRAP1-213ENST00000575707 ABCA5Q8WWZ7 1642 aa29.47■■■□□ 2.31
TRAP1-213ENST00000575707 SYNJ1O43426 1573 aa29.46■■■□□ 2.31
TRAP1-213ENST00000575707 CLASP1Q7Z460 1538 aa29.45■■■□□ 2.31
TRAP1-213ENST00000575707 BIVM-ERCC5R4GMW8 1640 aa29.45■■■□□ 2.3
TRAP1-213ENST00000575707 TOP2BQ02880 1626 aa29.44■■■□□ 2.3
TRAP1-213ENST00000575707 WRNQ14191 1432 aaPredicted RBP eCLIP29.44■■■□□ 2.3
TRAP1-213ENST00000575707 CYB5RLQ6IPT4 315 aa29.42■■■□□ 2.3
TRAP1-213ENST00000575707 ARAP1Q96P48 1450 aa29.42■■■□□ 2.3
TRAP1-213ENST00000575707 ADAMTS12P58397 1594 aa29.23■■■□□ 2.27
TRAP1-213ENST00000575707 GRIN2AQ12879 1464 aa29.22■■■□□ 2.27
TRAP1-213ENST00000575707 ERICH3Q5RHP9 1530 aa29.17■■■□□ 2.26
TRAP1-213ENST00000575707 FHAD1B1AJZ9 1412 aa29.15■■■□□ 2.26
TRAP1-213ENST00000575707 NUP160Q12769 1436 aa29.12■■■□□ 2.25
TRAP1-213ENST00000575707 CEP170Q5SW79 1584 aa29.1■■■□□ 2.25
TRAP1-213ENST00000575707 TRHP20396 242 aaPredicted RBP29.03■■■□□ 2.24
TRAP1-213ENST00000575707 SHROOM2Q13796 1616 aa28.98■■■□□ 2.23
TRAP1-213ENST00000575707 ERCC6L2Q5T890 1561 aa28.97■■■□□ 2.23
TRAP1-213ENST00000575707 KIF27Q86VH2 1401 aa28.86■■■□□ 2.21
TRAP1-213ENST00000575707 RUSC2Q8N2Y8 1516 aa28.81■■■□□ 2.2
TRAP1-213ENST00000575707 IGF1RP08069 1367 aa28.81■■■□□ 2.2
TRAP1-213ENST00000575707 PRG4Q92954 1404 aaPredicted RBP28.79■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms