RNA–Protein interactions for RNA: ENST00000575693.1

AC003965.1-201, humanhuman

TSL 3 BASIC

Gene AC003965.1, Length 667 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003965.1-201ENST00000575693 NISCHQ9Y2I1 1504 aa22.69■■□□□ 1.22
AC003965.1-201ENST00000575693 CCDC180Q9P1Z9 1646 aa20.35■□□□□ 0.85
AC003965.1-201ENST00000575693 ABCC9O60706 1549 aa20.17■□□□□ 0.82
AC003965.1-201ENST00000575693 RB1CC1Q8TDY2 1594 aa19.28■□□□□ 0.68
AC003965.1-201ENST00000575693 NACADO15069 1562 aa19.17■□□□□ 0.66
AC003965.1-201ENST00000575693 DCAF8L2P0C7V8 631 aa19.13■□□□□ 0.65
AC003965.1-201ENST00000575693 UNC13AQ9UPW8 1703 aa18.93■□□□□ 0.62
AC003965.1-201ENST00000575693 MYO15BQ96JP2 1530 aa18.92■□□□□ 0.62
AC003965.1-201ENST00000575693 ZCCHC6Q5VYS8 1495 aaKnown RBP18.83■□□□□ 0.6
AC003965.1-201ENST00000575693 PABPN1Q86U42 306 aaKnown RBP eCLIP18.79■□□□□ 0.6
AC003965.1-201ENST00000575693 DNAJC5BQ9UF47 199 aa18.75■□□□□ 0.59
AC003965.1-201ENST00000575693 DCAF1Q9Y4B6 1507 aa18.74■□□□□ 0.59
AC003965.1-201ENST00000575693 BICRAQ9NZM4 1560 aa18.7■□□□□ 0.58
AC003965.1-201ENST00000575693 SCRIBQ14160 1630 aa18.55■□□□□ 0.56
AC003965.1-201ENST00000575693 SHROOM4Q9ULL8 1493 aa18.44■□□□□ 0.54
AC003965.1-201ENST00000575693 CC2D2AQ9P2K1 1620 aa18.26■□□□□ 0.51
AC003965.1-201ENST00000575693 EIF4G1Q04637 1599 aaKnown RBP18.24■□□□□ 0.51
AC003965.1-201ENST00000575693 CECR2Q9BXF3 1484 aa18.15■□□□□ 0.5
AC003965.1-201ENST00000575693 SMARCA4P51532 1647 aa17.7■□□□□ 0.42
AC003965.1-201ENST00000575693 NCAPD3P42695 1498 aa17.67■□□□□ 0.42
AC003965.1-201ENST00000575693 ATAD2BQ9ULI0 1458 aa17.64■□□□□ 0.41
AC003965.1-201ENST00000575693 SMARCA2P51531 1590 aa17.63■□□□□ 0.41
AC003965.1-201ENST00000575693 BAZ1AQ9NRL2 1556 aaPredicted RBP17.62■□□□□ 0.41
AC003965.1-201ENST00000575693 HMGXB3Q12766 1538 aa17.57■□□□□ 0.4
AC003965.1-201ENST00000575693 BAZ1BQ9UIG0 1483 aaKnown RBP17.5■□□□□ 0.39
AC003965.1-201ENST00000575693 PEG3Q9GZU2 1588 aa17.5■□□□□ 0.39
AC003965.1-201ENST00000575693 MROH2BQ7Z745 1585 aa17.49■□□□□ 0.39
AC003965.1-201ENST00000575693 ERCC6Q03468 1493 aa17.42■□□□□ 0.38
AC003965.1-201ENST00000575693 NESP48681 1621 aa17.37■□□□□ 0.37
AC003965.1-201ENST00000575693 WIZO95785 1651 aa17.33■□□□□ 0.37
AC003965.1-201ENST00000575693 CUX2O14529 1486 aa17.31■□□□□ 0.36
AC003965.1-201ENST00000575693 LAMC3Q9Y6N6 1575 aa17.29■□□□□ 0.36
AC003965.1-201ENST00000575693 KIF21AQ7Z4S6 1674 aa17.22■□□□□ 0.35
AC003965.1-201ENST00000575693 AEBP2Q6ZN18 517 aaPredicted RBP17.21■□□□□ 0.35
AC003965.1-201ENST00000575693 THOC2Q8NI27 1593 aaKnown RBP17.19■□□□□ 0.34
AC003965.1-201ENST00000575693 RSF1Q96T23 1441 aaPredicted RBP17.16■□□□□ 0.34
AC003965.1-201ENST00000575693 PDS5BQ9NTI5 1447 aa17.16■□□□□ 0.34
AC003965.1-201ENST00000575693 CADPSQ9ULU8 1353 aa17.14■□□□□ 0.33
AC003965.1-201ENST00000575693 DNAJC5Q9H3Z4 198 aa17.13■□□□□ 0.33
AC003965.1-201ENST00000575693 TOP2AP11388 1531 aaKnown RBP17.09■□□□□ 0.33
AC003965.1-201ENST00000575693 MRC2Q9UBG0 1479 aa17■□□□□ 0.31
AC003965.1-201ENST00000575693 CHIC1Q5VXU3 224 aa16.99■□□□□ 0.31
AC003965.1-201ENST00000575693 CFTRP13569 1480 aa16.98■□□□□ 0.31
AC003965.1-201ENST00000575693 CEP164Q9UPV0 1460 aa16.98■□□□□ 0.31
AC003965.1-201ENST00000575693 WDR62O43379 1518 aa16.96■□□□□ 0.31
AC003965.1-201ENST00000575693 FANCD2Q9BXW9 1451 aa16.96■□□□□ 0.31
AC003965.1-201ENST00000575693 PRDM2Q13029 1718 aa16.95■□□□□ 0.3
AC003965.1-201ENST00000575693 CCDC88BA6NC98 1476 aa16.88■□□□□ 0.29
AC003965.1-201ENST00000575693 URB2Q14146 1524 aaKnown RBP16.8■□□□□ 0.28
AC003965.1-201ENST00000575693 TOPBP1Q92547 1522 aa16.66■□□□□ 0.26
AC003965.1-201ENST00000575693 ABCC8Q09428 1581 aa16.64■□□□□ 0.25
AC003965.1-201ENST00000575693 DNMBPQ6XZF7 1577 aa16.63■□□□□ 0.25
AC003965.1-201ENST00000575693 IFT140Q96RY7 1462 aa16.61■□□□□ 0.25
AC003965.1-201ENST00000575693 ZNF608Q9ULD9 1512 aaPredicted RBP16.58■□□□□ 0.24
AC003965.1-201ENST00000575693 OSCARQ8IYS5 282 aa16.55■□□□□ 0.24
AC003965.1-201ENST00000575693 SUPT5HO00267 1087 aaKnown RBP16.54■□□□□ 0.24
AC003965.1-201ENST00000575693 EIF4G3O43432 1585 aaKnown RBP16.54■□□□□ 0.24
AC003965.1-201ENST00000575693 TARBP1Q13395 1621 aaKnown RBP16.52■□□□□ 0.23
AC003965.1-201ENST00000575693 POLA1P09884 1462 aaPredicted RBP16.49■□□□□ 0.23
AC003965.1-201ENST00000575693 TRIM41Q8WV44 630 aa16.48■□□□□ 0.23
AC003965.1-201ENST00000575693 AQRO60306 1485 aaKnown RBP eCLIP16.45■□□□□ 0.22
AC003965.1-201ENST00000575693 RAD54L2Q9Y4B4 1467 aa16.43■□□□□ 0.22
AC003965.1-201ENST00000575693 CHD1O14646 1710 aa16.43■□□□□ 0.22
AC003965.1-201ENST00000575693 CUX1P39880 1505 aa16.43■□□□□ 0.22
AC003965.1-201ENST00000575693 FGD5Q6ZNL6 1462 aa16.42■□□□□ 0.22
AC003965.1-201ENST00000575693 SOGA1O94964 1423 aa16.42■□□□□ 0.22
AC003965.1-201ENST00000575693 WDR97A6NE52 1622 aa16.37■□□□□ 0.21
AC003965.1-201ENST00000575693 TDRD9Q8NDG6 1382 aaKnown RBP16.37■□□□□ 0.21
AC003965.1-201ENST00000575693 RIMBP3CA6NJZ7 1639 aa16.36■□□□□ 0.21
AC003965.1-201ENST00000575693 RIMBP3BA6NNM3 1639 aa16.36■□□□□ 0.21
AC003965.1-201ENST00000575693 RIMBP3Q9UFD9 1639 aa16.36■□□□□ 0.21
AC003965.1-201ENST00000575693 FBLN2P98095 1184 aa16.34■□□□□ 0.21
AC003965.1-201ENST00000575693 ARHGEF11O15085 1522 aa16.29■□□□□ 0.2
AC003965.1-201ENST00000575693 SNAPC4Q5SXM2 1469 aa16.29■□□□□ 0.2
AC003965.1-201ENST00000575693 PBRM1Q86U86 1689 aa16.29■□□□□ 0.2
AC003965.1-201ENST00000575693 GRIN2BQ13224 1484 aa16.26■□□□□ 0.19
AC003965.1-201ENST00000575693 MAGI1Q96QZ7 1491 aaPredicted RBP16.25■□□□□ 0.19
AC003965.1-201ENST00000575693 BIVM-ERCC5R4GMW8 1640 aa16.24■□□□□ 0.19
AC003965.1-201ENST00000575693 GAPVD1Q14C86 1478 aa16.23■□□□□ 0.19
AC003965.1-201ENST00000575693 ABCA10Q8WWZ4 1543 aa16.23■□□□□ 0.19
AC003965.1-201ENST00000575693 TOP2BQ02880 1626 aa16.23■□□□□ 0.19
AC003965.1-201ENST00000575693 ABCA5Q8WWZ7 1642 aa16.23■□□□□ 0.19
AC003965.1-201ENST00000575693 CHMP7Q8WUX9 453 aaPredicted RBP16.22■□□□□ 0.19
AC003965.1-201ENST00000575693 SYNJ1O43426 1573 aa16.21■□□□□ 0.18
AC003965.1-201ENST00000575693 WRNQ14191 1432 aaPredicted RBP eCLIP16.2■□□□□ 0.18
AC003965.1-201ENST00000575693 SYNJ2O15056 1496 aa16.2■□□□□ 0.18
AC003965.1-201ENST00000575693 CYB5RLQ6IPT4 315 aa16.17■□□□□ 0.18
AC003965.1-201ENST00000575693 CLASP1Q7Z460 1538 aa16.17■□□□□ 0.18
AC003965.1-201ENST00000575693 ARAP1Q96P48 1450 aa16.13■□□□□ 0.17
AC003965.1-201ENST00000575693 ADAMTS12P58397 1594 aa16.09■□□□□ 0.17
AC003965.1-201ENST00000575693 GRIN2AQ12879 1464 aa16.06■□□□□ 0.16
AC003965.1-201ENST00000575693 ERICH3Q5RHP9 1530 aa16.04■□□□□ 0.16
AC003965.1-201ENST00000575693 FHAD1B1AJZ9 1412 aa16.02■□□□□ 0.15
AC003965.1-201ENST00000575693 CEP170Q5SW79 1584 aa16.01■□□□□ 0.15
AC003965.1-201ENST00000575693 NUP160Q12769 1436 aa15.98■□□□□ 0.15
AC003965.1-201ENST00000575693 TRHP20396 242 aaPredicted RBP15.96■□□□□ 0.15
AC003965.1-201ENST00000575693 ERCC6L2Q5T890 1561 aa15.94■□□□□ 0.14
AC003965.1-201ENST00000575693 SHROOM2Q13796 1616 aa15.94■□□□□ 0.14
AC003965.1-201ENST00000575693 KIF27Q86VH2 1401 aa15.89■□□□□ 0.13
AC003965.1-201ENST00000575693 CUL7Q14999 1698 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms