RNA–Protein interactions for RNA: ENST00000575397.5

RFWD3-211, Transcript of ring finger and WD repeat domain 3, humanhuman

TSL 2

Gene RFWD3, Length 841 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3-211ENST00000575397 NISCHQ9Y2I1 1504 aa23.03■■□□□ 1.28
RFWD3-211ENST00000575397 ABCC9O60706 1549 aa21.2■□□□□ 0.98
RFWD3-211ENST00000575397 CCDC180Q9P1Z9 1646 aa20.78■□□□□ 0.92
RFWD3-211ENST00000575397 DNAJC5BQ9UF47 199 aa20.21■□□□□ 0.83
RFWD3-211ENST00000575397 RB1CC1Q8TDY2 1594 aa19.96■□□□□ 0.79
RFWD3-211ENST00000575397 NACADO15069 1562 aa19.72■□□□□ 0.75
RFWD3-211ENST00000575397 PABPN1Q86U42 306 aaKnown RBP eCLIP19.7■□□□□ 0.74
RFWD3-211ENST00000575397 DCAF8L2P0C7V8 631 aa19.67■□□□□ 0.74
RFWD3-211ENST00000575397 AEBP2Q6ZN18 517 aaPredicted RBP19.63■□□□□ 0.73
RFWD3-211ENST00000575397 UNC13AQ9UPW8 1703 aa19.56■□□□□ 0.72
RFWD3-211ENST00000575397 BICRAQ9NZM4 1560 aa19.43■□□□□ 0.7
RFWD3-211ENST00000575397 MYO15BQ96JP2 1530 aa19.29■□□□□ 0.68
RFWD3-211ENST00000575397 CC2D2AQ9P2K1 1620 aa19.11■□□□□ 0.65
RFWD3-211ENST00000575397 CECR2Q9BXF3 1484 aa19.09■□□□□ 0.65
RFWD3-211ENST00000575397 SHROOM4Q9ULL8 1493 aa19.03■□□□□ 0.64
RFWD3-211ENST00000575397 ZCCHC6Q5VYS8 1495 aaKnown RBP19.02■□□□□ 0.63
RFWD3-211ENST00000575397 SCRIBQ14160 1630 aa19■□□□□ 0.63
RFWD3-211ENST00000575397 EIF4G1Q04637 1599 aaKnown RBP18.98■□□□□ 0.63
RFWD3-211ENST00000575397 DCAF1Q9Y4B6 1507 aa18.94■□□□□ 0.62
RFWD3-211ENST00000575397 DNAJC5Q9H3Z4 198 aa18.72■□□□□ 0.59
RFWD3-211ENST00000575397 CHIC1Q5VXU3 224 aa18.35■□□□□ 0.53
RFWD3-211ENST00000575397 CUX2O14529 1486 aa18.33■□□□□ 0.53
RFWD3-211ENST00000575397 ERCC6Q03468 1493 aa18.3■□□□□ 0.52
RFWD3-211ENST00000575397 NCAPD3P42695 1498 aa18.22■□□□□ 0.51
RFWD3-211ENST00000575397 ATAD2BQ9ULI0 1458 aa18.14■□□□□ 0.5
RFWD3-211ENST00000575397 NESP48681 1621 aa18.13■□□□□ 0.49
RFWD3-211ENST00000575397 SMARCA4P51532 1647 aa18.05■□□□□ 0.48
RFWD3-211ENST00000575397 HMGXB3Q12766 1538 aa18.05■□□□□ 0.48
RFWD3-211ENST00000575397 SMARCA2P51531 1590 aa18.04■□□□□ 0.48
RFWD3-211ENST00000575397 THOC2Q8NI27 1593 aaKnown RBP17.98■□□□□ 0.47
RFWD3-211ENST00000575397 BAZ1BQ9UIG0 1483 aaKnown RBP17.95■□□□□ 0.46
RFWD3-211ENST00000575397 BAZ1AQ9NRL2 1556 aaPredicted RBP17.88■□□□□ 0.45
RFWD3-211ENST00000575397 LAMC3Q9Y6N6 1575 aa17.87■□□□□ 0.45
RFWD3-211ENST00000575397 KIF21AQ7Z4S6 1674 aa17.87■□□□□ 0.45
RFWD3-211ENST00000575397 TRIM41Q8WV44 630 aa17.85■□□□□ 0.45
RFWD3-211ENST00000575397 PEG3Q9GZU2 1588 aa17.83■□□□□ 0.45
RFWD3-211ENST00000575397 MROH2BQ7Z745 1585 aa17.79■□□□□ 0.44
RFWD3-211ENST00000575397 PDS5BQ9NTI5 1447 aa17.77■□□□□ 0.44
RFWD3-211ENST00000575397 CADPSQ9ULU8 1353 aa17.66■□□□□ 0.42
RFWD3-211ENST00000575397 MRC2Q9UBG0 1479 aa17.66■□□□□ 0.42
RFWD3-211ENST00000575397 WDR62O43379 1518 aa17.62■□□□□ 0.41
RFWD3-211ENST00000575397 WIZO95785 1651 aa17.57■□□□□ 0.4
RFWD3-211ENST00000575397 CEP164Q9UPV0 1460 aa17.53■□□□□ 0.4
RFWD3-211ENST00000575397 FANCD2Q9BXW9 1451 aa17.49■□□□□ 0.39
RFWD3-211ENST00000575397 OSCARQ8IYS5 282 aa17.46■□□□□ 0.39
RFWD3-211ENST00000575397 CFTRP13569 1480 aa17.39■□□□□ 0.37
RFWD3-211ENST00000575397 URB2Q14146 1524 aaKnown RBP17.38■□□□□ 0.37
RFWD3-211ENST00000575397 RIMBP3CA6NJZ7 1639 aa17.31■□□□□ 0.36
RFWD3-211ENST00000575397 RIMBP3BA6NNM3 1639 aa17.31■□□□□ 0.36
RFWD3-211ENST00000575397 RIMBP3Q9UFD9 1639 aa17.31■□□□□ 0.36
RFWD3-211ENST00000575397 TOP2AP11388 1531 aaKnown RBP17.27■□□□□ 0.36
RFWD3-211ENST00000575397 RSF1Q96T23 1441 aaPredicted RBP17.27■□□□□ 0.35
RFWD3-211ENST00000575397 ZNF608Q9ULD9 1512 aaPredicted RBP17.24■□□□□ 0.35
RFWD3-211ENST00000575397 ARHGEF11O15085 1522 aa17.21■□□□□ 0.34
RFWD3-211ENST00000575397 PRDM2Q13029 1718 aa17.18■□□□□ 0.34
RFWD3-211ENST00000575397 IFT140Q96RY7 1462 aa17.18■□□□□ 0.34
RFWD3-211ENST00000575397 TOPBP1Q92547 1522 aa17.12■□□□□ 0.33
RFWD3-211ENST00000575397 CYB5RLQ6IPT4 315 aa17.12■□□□□ 0.33
RFWD3-211ENST00000575397 EIF4G3O43432 1585 aaKnown RBP17.11■□□□□ 0.33
RFWD3-211ENST00000575397 CCDC88BA6NC98 1476 aa17.11■□□□□ 0.33
RFWD3-211ENST00000575397 CHD1O14646 1710 aa17.05■□□□□ 0.32
RFWD3-211ENST00000575397 TRHP20396 242 aaPredicted RBP17.05■□□□□ 0.32
RFWD3-211ENST00000575397 AQRO60306 1485 aaKnown RBP eCLIP17.05■□□□□ 0.323e-8■■■■■ 31.9
RFWD3-211ENST00000575397 ARAP1Q96P48 1450 aa17.03■□□□□ 0.32
RFWD3-211ENST00000575397 DNMBPQ6XZF7 1577 aa17.02■□□□□ 0.31
RFWD3-211ENST00000575397 FBLN2P98095 1184 aa17.01■□□□□ 0.31
RFWD3-211ENST00000575397 TARBP1Q13395 1621 aaKnown RBP16.99■□□□□ 0.31
RFWD3-211ENST00000575397 ABCC8Q09428 1581 aa16.99■□□□□ 0.31
RFWD3-211ENST00000575397 POLA1P09884 1462 aaPredicted RBP16.93■□□□□ 0.3
RFWD3-211ENST00000575397 RAD54L2Q9Y4B4 1467 aa16.91■□□□□ 0.3
RFWD3-211ENST00000575397 TDRD9Q8NDG6 1382 aaKnown RBP16.88■□□□□ 0.29
RFWD3-211ENST00000575397 SNAPC4Q5SXM2 1469 aa16.85■□□□□ 0.29
RFWD3-211ENST00000575397 SOGA1O94964 1423 aa16.84■□□□□ 0.29
RFWD3-211ENST00000575397 SENP3Q9H4L4 574 aaPredicted RBP16.83■□□□□ 0.28
RFWD3-211ENST00000575397 CLASP1Q7Z460 1538 aa16.82■□□□□ 0.28
RFWD3-211ENST00000575397 CHMP7Q8WUX9 453 aaPredicted RBP16.79■□□□□ 0.28
RFWD3-211ENST00000575397 FGD5Q6ZNL6 1462 aa16.79■□□□□ 0.28
RFWD3-211ENST00000575397 SYNJ1O43426 1573 aa16.77■□□□□ 0.28
RFWD3-211ENST00000575397 MAGI1Q96QZ7 1491 aaPredicted RBP16.73■□□□□ 0.27
RFWD3-211ENST00000575397 CUX1P39880 1505 aa16.72■□□□□ 0.27
RFWD3-211ENST00000575397 WDR97A6NE52 1622 aa16.72■□□□□ 0.27
RFWD3-211ENST00000575397 GRIN2BQ13224 1484 aa16.71■□□□□ 0.27
RFWD3-211ENST00000575397 SYNJ2O15056 1496 aa16.7■□□□□ 0.26
RFWD3-211ENST00000575397 GAPVD1Q14C86 1478 aa16.67■□□□□ 0.26
RFWD3-211ENST00000575397 PBRM1Q86U86 1689 aa16.65■□□□□ 0.26
RFWD3-211ENST00000575397 ERCC6L2Q5T890 1561 aa16.6■□□□□ 0.25
RFWD3-211ENST00000575397 ABCA5Q8WWZ7 1642 aa16.56■□□□□ 0.24
RFWD3-211ENST00000575397 PHF23Q9BUL5 403 aaPredicted RBP16.54■□□□□ 0.24
RFWD3-211ENST00000575397 ABCA10Q8WWZ4 1543 aa16.54■□□□□ 0.24
RFWD3-211ENST00000575397 GRIN2AQ12879 1464 aa16.51■□□□□ 0.23
RFWD3-211ENST00000575397 CEP170Q5SW79 1584 aa16.5■□□□□ 0.23
RFWD3-211ENST00000575397 ADAMTS12P58397 1594 aa16.47■□□□□ 0.23
RFWD3-211ENST00000575397 NUP160Q12769 1436 aa16.45■□□□□ 0.22
RFWD3-211ENST00000575397 SHROOM2Q13796 1616 aa16.42■□□□□ 0.22
RFWD3-211ENST00000575397 KIF13AQ9H1H9 1805 aa16.41■□□□□ 0.22
RFWD3-211ENST00000575397 WRNQ14191 1432 aaPredicted RBP eCLIP16.39■□□□□ 0.21
RFWD3-211ENST00000575397 FHAD1B1AJZ9 1412 aa16.38■□□□□ 0.21
RFWD3-211ENST00000575397 PRG4Q92954 1404 aaPredicted RBP16.35■□□□□ 0.21
RFWD3-211ENST00000575397 BIVM-ERCC5R4GMW8 1640 aa16.34■□□□□ 0.21
RFWD3-211ENST00000575397 TOP2BQ02880 1626 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms