RNA–Protein interactions for RNA: ENST00000575313.1

CLDN7-208, Transcript of claudin 7, humanhuman

TSL 3

Gene CLDN7, Length 605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-208ENST00000575313 NISCHQ9Y2I1 1504 aa42.94■■■■■ 4.46
CLDN7-208ENST00000575313 CCDC180Q9P1Z9 1646 aa38.11■■■■□ 3.69
CLDN7-208ENST00000575313 ABCC9O60706 1549 aa37.07■■■■□ 3.53
CLDN7-208ENST00000575313 NACADO15069 1562 aa35.81■■■■□ 3.32
CLDN7-208ENST00000575313 ZCCHC6Q5VYS8 1495 aaKnown RBP35.8■■■■□ 3.32
CLDN7-208ENST00000575313 RB1CC1Q8TDY2 1594 aa35.79■■■■□ 3.32
CLDN7-208ENST00000575313 DCAF8L2P0C7V8 631 aa35.77■■■■□ 3.32
CLDN7-208ENST00000575313 MYO15BQ96JP2 1530 aa35.67■■■■□ 3.3
CLDN7-208ENST00000575313 DCAF1Q9Y4B6 1507 aa35.57■■■■□ 3.29
CLDN7-208ENST00000575313 UNC13AQ9UPW8 1703 aa34.89■■■■□ 3.18
CLDN7-208ENST00000575313 SCRIBQ14160 1630 aa34.74■■■■□ 3.15
CLDN7-208ENST00000575313 PABPN1Q86U42 306 aaKnown RBP eCLIP34.66■■■■□ 3.14
CLDN7-208ENST00000575313 BICRAQ9NZM4 1560 aa34.65■■■■□ 3.14
CLDN7-208ENST00000575313 SHROOM4Q9ULL8 1493 aa34.4■■■■□ 3.1
CLDN7-208ENST00000575313 DNAJC5BQ9UF47 199 aa33.81■■■■□ 3
CLDN7-208ENST00000575313 EIF4G1Q04637 1599 aaKnown RBP33.74■■■□□ 2.99
CLDN7-208ENST00000575313 CC2D2AQ9P2K1 1620 aa33.54■■■□□ 2.96
CLDN7-208ENST00000575313 CECR2Q9BXF3 1484 aa33.39■■■□□ 2.94
CLDN7-208ENST00000575313 BAZ1AQ9NRL2 1556 aaPredicted RBP33.29■■■□□ 2.92
CLDN7-208ENST00000575313 SMARCA4P51532 1647 aa33.27■■■□□ 2.92
CLDN7-208ENST00000575313 MROH2BQ7Z745 1585 aa33.06■■■□□ 2.88
CLDN7-208ENST00000575313 ATAD2BQ9ULI0 1458 aa33.05■■■□□ 2.88
CLDN7-208ENST00000575313 SMARCA2P51531 1590 aa33.04■■■□□ 2.88
CLDN7-208ENST00000575313 NCAPD3P42695 1498 aa33.03■■■□□ 2.88
CLDN7-208ENST00000575313 PEG3Q9GZU2 1588 aa32.96■■■□□ 2.87
CLDN7-208ENST00000575313 HMGXB3Q12766 1538 aa32.88■■■□□ 2.85
CLDN7-208ENST00000575313 BAZ1BQ9UIG0 1483 aaKnown RBP32.8■■■□□ 2.84
CLDN7-208ENST00000575313 RSF1Q96T23 1441 aaPredicted RBP32.77■■■□□ 2.84
CLDN7-208ENST00000575313 WIZO95785 1651 aa32.71■■■□□ 2.83
CLDN7-208ENST00000575313 TOP2AP11388 1531 aaKnown RBP32.41■■■□□ 2.78
CLDN7-208ENST00000575313 LAMC3Q9Y6N6 1575 aa32.12■■■□□ 2.73
CLDN7-208ENST00000575313 NESP48681 1621 aa32.11■■■□□ 2.73
CLDN7-208ENST00000575313 CADPSQ9ULU8 1353 aa32.07■■■□□ 2.72
CLDN7-208ENST00000575313 SUPT5HO00267 1087 aaKnown RBP32.06■■■□□ 2.72
CLDN7-208ENST00000575313 CCDC88BA6NC98 1476 aa32.02■■■□□ 2.72
CLDN7-208ENST00000575313 ERCC6Q03468 1493 aa31.97■■■□□ 2.71
CLDN7-208ENST00000575313 PDS5BQ9NTI5 1447 aa31.92■■■□□ 2.7
CLDN7-208ENST00000575313 CFTRP13569 1480 aa31.91■■■□□ 2.7
CLDN7-208ENST00000575313 KIF21AQ7Z4S6 1674 aa31.74■■■□□ 2.67
CLDN7-208ENST00000575313 FANCD2Q9BXW9 1451 aa31.69■■■□□ 2.66
CLDN7-208ENST00000575313 PRDM2Q13029 1718 aa31.66■■■□□ 2.66
CLDN7-208ENST00000575313 CEP164Q9UPV0 1460 aa31.65■■■□□ 2.66
CLDN7-208ENST00000575313 THOC2Q8NI27 1593 aaKnown RBP31.61■■■□□ 2.65
CLDN7-208ENST00000575313 CUX2O14529 1486 aa31.59■■■□□ 2.65
CLDN7-208ENST00000575313 MRC2Q9UBG0 1479 aa31.56■■■□□ 2.64
CLDN7-208ENST00000575313 WDR62O43379 1518 aa31.44■■■□□ 2.62
CLDN7-208ENST00000575313 URB2Q14146 1524 aaKnown RBP31.34■■■□□ 2.61
CLDN7-208ENST00000575313 ABCC8Q09428 1581 aa31.26■■■□□ 2.6
CLDN7-208ENST00000575313 TOPBP1Q92547 1522 aa31.19■■■□□ 2.58
CLDN7-208ENST00000575313 DNMBPQ6XZF7 1577 aa31.19■■■□□ 2.58
CLDN7-208ENST00000575313 CUX1P39880 1505 aa31.02■■■□□ 2.56
CLDN7-208ENST00000575313 IFT140Q96RY7 1462 aa30.98■■■□□ 2.55
CLDN7-208ENST00000575313 POLA1P09884 1462 aaPredicted RBP30.95■■■□□ 2.54
CLDN7-208ENST00000575313 WRNQ14191 1432 aaPredicted RBP eCLIP30.92■■■□□ 2.54
CLDN7-208ENST00000575313 FGD5Q6ZNL6 1462 aa30.89■■■□□ 2.54
CLDN7-208ENST00000575313 TARBP1Q13395 1621 aaKnown RBP30.84■■■□□ 2.53
CLDN7-208ENST00000575313 SOGA1O94964 1423 aa30.83■■■□□ 2.53
CLDN7-208ENST00000575313 TOP2BQ02880 1626 aa30.82■■■□□ 2.52
CLDN7-208ENST00000575313 BIVM-ERCC5R4GMW8 1640 aa30.8■■■□□ 2.52
CLDN7-208ENST00000575313 SYNJ1O43426 1573 aa30.79■■■□□ 2.52
CLDN7-208ENST00000575313 RAD54L2Q9Y4B4 1467 aa30.78■■■□□ 2.52
CLDN7-208ENST00000575313 ZNF608Q9ULD9 1512 aaPredicted RBP30.78■■■□□ 2.52
CLDN7-208ENST00000575313 EIF4G3O43432 1585 aaKnown RBP30.68■■■□□ 2.5
CLDN7-208ENST00000575313 WDR97A6NE52 1622 aa30.66■■■□□ 2.5
CLDN7-208ENST00000575313 AQRO60306 1485 aaKnown RBP eCLIP30.63■■■□□ 2.49
CLDN7-208ENST00000575313 ABCA10Q8WWZ4 1543 aa30.63■■■□□ 2.49
CLDN7-208ENST00000575313 TDRD9Q8NDG6 1382 aaKnown RBP30.62■■■□□ 2.49
CLDN7-208ENST00000575313 GAPVD1Q14C86 1478 aa30.48■■■□□ 2.47
CLDN7-208ENST00000575313 ABCA5Q8WWZ7 1642 aa30.47■■■□□ 2.47
CLDN7-208ENST00000575313 GRIN2BQ13224 1484 aa30.46■■■□□ 2.47
CLDN7-208ENST00000575313 DNAJC5Q9H3Z4 198 aa30.38■■■□□ 2.45
CLDN7-208ENST00000575313 MAGI1Q96QZ7 1491 aaPredicted RBP30.38■■■□□ 2.45
CLDN7-208ENST00000575313 PBRM1Q86U86 1689 aa30.37■■■□□ 2.45
CLDN7-208ENST00000575313 SNAPC4Q5SXM2 1469 aa30.37■■■□□ 2.45
CLDN7-208ENST00000575313 TRIM41Q8WV44 630 aa30.32■■■□□ 2.44
CLDN7-208ENST00000575313 OSCARQ8IYS5 282 aa30.31■■■□□ 2.44
CLDN7-208ENST00000575313 KIF27Q86VH2 1401 aa30.28■■■□□ 2.44
CLDN7-208ENST00000575313 ERICH3Q5RHP9 1530 aa30.27■■■□□ 2.44
CLDN7-208ENST00000575313 FBLN2P98095 1184 aa30.25■■■□□ 2.43
CLDN7-208ENST00000575313 SYNJ2O15056 1496 aa30.25■■■□□ 2.43
CLDN7-208ENST00000575313 CHD1O14646 1710 aa30.24■■■□□ 2.43
CLDN7-208ENST00000575313 CHMP7Q8WUX9 453 aaPredicted RBP30.22■■■□□ 2.43
CLDN7-208ENST00000575313 ADAMTS12P58397 1594 aa30.16■■■□□ 2.42
CLDN7-208ENST00000575313 FHAD1B1AJZ9 1412 aa30.15■■■□□ 2.42
CLDN7-208ENST00000575313 CHIC1Q5VXU3 224 aa30.1■■■□□ 2.41
CLDN7-208ENST00000575313 IGF1RP08069 1367 aa30.1■■■□□ 2.41
CLDN7-208ENST00000575313 GRIN2AQ12879 1464 aa30.06■■■□□ 2.4
CLDN7-208ENST00000575313 CUL7Q14999 1698 aa30.03■■■□□ 2.4
CLDN7-208ENST00000575313 RUSC2Q8N2Y8 1516 aa29.97■■■□□ 2.39
CLDN7-208ENST00000575313 CLASP1Q7Z460 1538 aa29.94■■■□□ 2.38
CLDN7-208ENST00000575313 CARMIL1Q5VZK9 1371 aa29.93■■■□□ 2.38
CLDN7-208ENST00000575313 NUP160Q12769 1436 aa29.92■■■□□ 2.38
CLDN7-208ENST00000575313 CEP170Q5SW79 1584 aa29.87■■■□□ 2.37
CLDN7-208ENST00000575313 EEA1Q15075 1411 aa29.84■■■□□ 2.37
CLDN7-208ENST00000575313 ARHGEF11O15085 1522 aa29.79■■■□□ 2.36
CLDN7-208ENST00000575313 RAPGEF2Q9Y4G8 1499 aa29.79■■■□□ 2.36
CLDN7-208ENST00000575313 RIMBP3CA6NJZ7 1639 aa29.75■■■□□ 2.35
CLDN7-208ENST00000575313 RIMBP3BA6NNM3 1639 aa29.75■■■□□ 2.35
CLDN7-208ENST00000575313 RIMBP3Q9UFD9 1639 aa29.75■■■□□ 2.35
CLDN7-208ENST00000575313 CSRNP3Q8WYN3 585 aa29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms