RNA–Protein interactions for RNA: ENST00000574293.1

GSE1-214, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 3

Gene GSE1, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-214ENST00000574293 NISCHQ9Y2I1 1504 aa37.48■■■■□ 3.59
GSE1-214ENST00000574293 CCDC180Q9P1Z9 1646 aa33.18■■■□□ 2.9
GSE1-214ENST00000574293 ABCC9O60706 1549 aa32.42■■■□□ 2.78
GSE1-214ENST00000574293 DCAF8L2P0C7V8 631 aa31.41■■■□□ 2.62
GSE1-214ENST00000574293 ZCCHC6Q5VYS8 1495 aaKnown RBP31.23■■■□□ 2.59
GSE1-214ENST00000574293 RB1CC1Q8TDY2 1594 aa31.2■■■□□ 2.58
GSE1-214ENST00000574293 NACADO15069 1562 aa31.19■■■□□ 2.58
GSE1-214ENST00000574293 MYO15BQ96JP2 1530 aa31.02■■■□□ 2.56
GSE1-214ENST00000574293 DCAF1Q9Y4B6 1507 aa30.97■■■□□ 2.55
GSE1-214ENST00000574293 UNC13AQ9UPW8 1703 aa30.47■■■□□ 2.47
GSE1-214ENST00000574293 PABPN1Q86U42 306 aaKnown RBP eCLIP30.38■■■□□ 2.45
GSE1-214ENST00000574293 SCRIBQ14160 1630 aa30.37■■■□□ 2.45
GSE1-214ENST00000574293 BICRAQ9NZM4 1560 aa30.24■■■□□ 2.43
GSE1-214ENST00000574293 SHROOM4Q9ULL8 1493 aa29.88■■■□□ 2.37
GSE1-214ENST00000574293 DNAJC5BQ9UF47 199 aa29.63■■■□□ 2.33
GSE1-214ENST00000574293 EIF4G1Q04637 1599 aaKnown RBP29.44■■■□□ 2.3
GSE1-214ENST00000574293 CC2D2AQ9P2K1 1620 aa29.29■■■□□ 2.28
GSE1-214ENST00000574293 CECR2Q9BXF3 1484 aa29.21■■■□□ 2.27
GSE1-214ENST00000574293 SMARCA4P51532 1647 aa29.04■■■□□ 2.24
GSE1-214ENST00000574293 BAZ1AQ9NRL2 1556 aaPredicted RBP29.02■■■□□ 2.24
GSE1-214ENST00000574293 MROH2BQ7Z745 1585 aa28.91■■■□□ 2.22
GSE1-214ENST00000574293 ATAD2BQ9ULI0 1458 aa28.85■■■□□ 2.21
GSE1-214ENST00000574293 SMARCA2P51531 1590 aa28.8■■■□□ 2.2
GSE1-214ENST00000574293 NCAPD3P42695 1498 aa28.79■■■□□ 2.2
GSE1-214ENST00000574293 PEG3Q9GZU2 1588 aa28.71■■■□□ 2.19
GSE1-214ENST00000574293 RSF1Q96T23 1441 aaPredicted RBP28.65■■■□□ 2.18
GSE1-214ENST00000574293 HMGXB3Q12766 1538 aa28.64■■■□□ 2.18
GSE1-214ENST00000574293 BAZ1BQ9UIG0 1483 aaKnown RBP28.64■■■□□ 2.17
GSE1-214ENST00000574293 WIZO95785 1651 aa28.61■■■□□ 2.17
GSE1-214ENST00000574293 TOP2AP11388 1531 aaKnown RBP28.28■■■□□ 2.12
GSE1-214ENST00000574293 SUPT5HO00267 1087 aaKnown RBP28.16■■■□□ 2.1
GSE1-214ENST00000574293 NESP48681 1621 aa28.1■■■□□ 2.09
GSE1-214ENST00000574293 CADPSQ9ULU8 1353 aa27.99■■■□□ 2.07
GSE1-214ENST00000574293 LAMC3Q9Y6N6 1575 aa27.99■■■□□ 2.07
GSE1-214ENST00000574293 CCDC88BA6NC98 1476 aa27.99■■■□□ 2.07
GSE1-214ENST00000574293 ERCC6Q03468 1493 aa27.93■■■□□ 2.06
GSE1-214ENST00000574293 CFTRP13569 1480 aa27.84■■■□□ 2.05
GSE1-214ENST00000574293 PDS5BQ9NTI5 1447 aa27.84■■■□□ 2.05
GSE1-214ENST00000574293 KIF21AQ7Z4S6 1674 aa27.74■■■□□ 2.03
GSE1-214ENST00000574293 FANCD2Q9BXW9 1451 aa27.67■■■□□ 2.02
GSE1-214ENST00000574293 CEP164Q9UPV0 1460 aa27.62■■■□□ 2.01
GSE1-214ENST00000574293 PRDM2Q13029 1718 aa27.58■■■□□ 2.01
GSE1-214ENST00000574293 THOC2Q8NI27 1593 aaKnown RBP27.57■■■□□ 2
GSE1-214ENST00000574293 MRC2Q9UBG0 1479 aa27.53■■■□□ 2
GSE1-214ENST00000574293 CUX2O14529 1486 aa27.51■■□□□ 1.99
GSE1-214ENST00000574293 WDR62O43379 1518 aa27.41■■□□□ 1.98
GSE1-214ENST00000574293 URB2Q14146 1524 aaKnown RBP27.38■■□□□ 1.97
GSE1-214ENST00000574293 TOPBP1Q92547 1522 aa27.24■■□□□ 1.95
GSE1-214ENST00000574293 ABCC8Q09428 1581 aa27.23■■□□□ 1.95
GSE1-214ENST00000574293 DNMBPQ6XZF7 1577 aa27.21■■□□□ 1.95
GSE1-214ENST00000574293 CUX1P39880 1505 aa27.1■■□□□ 1.93
GSE1-214ENST00000574293 POLA1P09884 1462 aaPredicted RBP27.02■■□□□ 1.92
GSE1-214ENST00000574293 IFT140Q96RY7 1462 aa27.02■■□□□ 1.92
GSE1-214ENST00000574293 WRNQ14191 1432 aaPredicted RBP eCLIP27■■□□□ 1.91
GSE1-214ENST00000574293 FGD5Q6ZNL6 1462 aa27■■□□□ 1.91
GSE1-214ENST00000574293 SOGA1O94964 1423 aa26.95■■□□□ 1.9
GSE1-214ENST00000574293 RAD54L2Q9Y4B4 1467 aa26.94■■□□□ 1.9
GSE1-214ENST00000574293 SYNJ1O43426 1573 aa26.92■■□□□ 1.9
GSE1-214ENST00000574293 ZNF608Q9ULD9 1512 aaPredicted RBP26.91■■□□□ 1.9
GSE1-214ENST00000574293 TARBP1Q13395 1621 aaKnown RBP26.9■■□□□ 1.9
GSE1-214ENST00000574293 TOP2BQ02880 1626 aa26.9■■□□□ 1.9
GSE1-214ENST00000574293 BIVM-ERCC5R4GMW8 1640 aa26.87■■□□□ 1.89
GSE1-214ENST00000574293 AQRO60306 1485 aaKnown RBP eCLIP26.81■■□□□ 1.88
GSE1-214ENST00000574293 TDRD9Q8NDG6 1382 aaKnown RBP26.8■■□□□ 1.88
GSE1-214ENST00000574293 EIF4G3O43432 1585 aaKnown RBP26.78■■□□□ 1.88
GSE1-214ENST00000574293 ABCA10Q8WWZ4 1543 aa26.71■■□□□ 1.87
GSE1-214ENST00000574293 WDR97A6NE52 1622 aa26.7■■□□□ 1.86
GSE1-214ENST00000574293 GAPVD1Q14C86 1478 aa26.62■■□□□ 1.85
GSE1-214ENST00000574293 GRIN2BQ13224 1484 aa26.58■■□□□ 1.85
GSE1-214ENST00000574293 ABCA5Q8WWZ7 1642 aa26.57■■□□□ 1.84
GSE1-214ENST00000574293 TRIM41Q8WV44 630 aa26.56■■□□□ 1.84
GSE1-214ENST00000574293 DNAJC5Q9H3Z4 198 aa26.53■■□□□ 1.84
GSE1-214ENST00000574293 SNAPC4Q5SXM2 1469 aa26.53■■□□□ 1.84
GSE1-214ENST00000574293 FBLN2P98095 1184 aa26.52■■□□□ 1.84
GSE1-214ENST00000574293 PBRM1Q86U86 1689 aa26.51■■□□□ 1.83
GSE1-214ENST00000574293 OSCARQ8IYS5 282 aa26.49■■□□□ 1.83
GSE1-214ENST00000574293 MAGI1Q96QZ7 1491 aaPredicted RBP26.47■■□□□ 1.83
GSE1-214ENST00000574293 CHMP7Q8WUX9 453 aaPredicted RBP26.44■■□□□ 1.82
GSE1-214ENST00000574293 KIF27Q86VH2 1401 aa26.43■■□□□ 1.82
GSE1-214ENST00000574293 CHD1O14646 1710 aa26.41■■□□□ 1.82
GSE1-214ENST00000574293 ERICH3Q5RHP9 1530 aa26.39■■□□□ 1.81
GSE1-214ENST00000574293 SYNJ2O15056 1496 aa26.38■■□□□ 1.81
GSE1-214ENST00000574293 CHIC1Q5VXU3 224 aa26.34■■□□□ 1.81
GSE1-214ENST00000574293 IGF1RP08069 1367 aa26.32■■□□□ 1.8
GSE1-214ENST00000574293 FHAD1B1AJZ9 1412 aa26.31■■□□□ 1.8
GSE1-214ENST00000574293 ADAMTS12P58397 1594 aa26.31■■□□□ 1.8
GSE1-214ENST00000574293 RUSC2Q8N2Y8 1516 aa26.28■■□□□ 1.8
GSE1-214ENST00000574293 GRIN2AQ12879 1464 aa26.23■■□□□ 1.79
GSE1-214ENST00000574293 CARMIL1Q5VZK9 1371 aa26.18■■□□□ 1.78
GSE1-214ENST00000574293 CUL7Q14999 1698 aa26.17■■□□□ 1.78
GSE1-214ENST00000574293 CLASP1Q7Z460 1538 aa26.11■■□□□ 1.77
GSE1-214ENST00000574293 NUP160Q12769 1436 aa26.1■■□□□ 1.77
GSE1-214ENST00000574293 CEP170Q5SW79 1584 aa26.09■■□□□ 1.77
GSE1-214ENST00000574293 FAM9AQ8IZU1 332 aaPredicted RBP26.06■■□□□ 1.76
GSE1-214ENST00000574293 CSRNP3Q8WYN3 585 aa26.03■■□□□ 1.76
GSE1-214ENST00000574293 EEA1Q15075 1411 aa26.01■■□□□ 1.75
GSE1-214ENST00000574293 RAPGEF2Q9Y4G8 1499 aa26.01■■□□□ 1.75
GSE1-214ENST00000574293 ARHGEF11O15085 1522 aa26■■□□□ 1.75
GSE1-214ENST00000574293 RIMBP3CA6NJZ7 1639 aa25.99■■□□□ 1.75
GSE1-214ENST00000574293 RIMBP3BA6NNM3 1639 aa25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms